Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_G05
(836 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 68 9e-14
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 64 2e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 64 2e-12
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 5e-12
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 59 4e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 57 2e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 4e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 51 1e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 8e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 6e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 8e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 36 4e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.001
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 30 0.030
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.28
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.1
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 68.1 bits (159), Expect = 9e-14
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = +1
Query: 85 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 243
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 244 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 417
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 418 VSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
+ G V W + + + P D QTC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 64.1 bits (149), Expect = 2e-12
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Frame = +1
Query: 103 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 261
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 262 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 435
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 436 VSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
V W + + ++ P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 63.7 bits (148), Expect = 2e-12
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Frame = +1
Query: 130 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 294
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 459
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 460 ISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
+ + ++ P D Q+C KFGS +N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 63.3 bits (147), Expect = 3e-12
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +1
Query: 181 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 354
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 355 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTX 522
PD+VL N A G+Y +R + + NG V W+ + ++ + P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 523 KFGSRMHNSDEMDFVI 570
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +1
Query: 130 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 294
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDIST 468
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 469 PISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
+ + P D Q C KFGS ++ +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 63.3 bits (147), Expect = 3e-12
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Frame = +1
Query: 130 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 294
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDIST 468
WN E+G L ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 469 PISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
+ + P D Q C KFGS ++ +++D V+
Sbjct: 178 TCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
G Y V++NGS ++ + + + P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 62.5 bits (145), Expect = 5e-12
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Frame = +1
Query: 109 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 276
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 277 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 447
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 448 KRLDISTPISMQLDNXPNDMQTCTXKFGS 534
RL I M L+N P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 62.1 bits (144), Expect = 6e-12
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = +1
Query: 130 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 294
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 468
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 469 PISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
+ ++ P D QTC KFGS ++ ++D
Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
G Y V+++GS ++ + M + P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
G Y V+++GS ++ + M + P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
G Y V+++GS ++ + + + P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.1 bits (139), Expect = 2e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
G Y V+++GS ++ + + + P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.1 bits (139), Expect = 2e-11
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +1
Query: 220 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 393
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 394 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVI 570
G Y V+++GS ++ + + + P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 60.1 bits (139), Expect = 2e-11
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Frame = +1
Query: 76 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 234
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 235 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 408
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 409 ---RARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
+A + + G V W + + ++ P D QTC KFGS ++ +D
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 3e-11
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Frame = +1
Query: 130 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 294
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 295 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 459
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 460 ISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
+ S+ ++ P D+QTC K GS ++ ++D
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 59.3 bits (137), Expect = 4e-11
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 8/170 (4%)
Frame = +1
Query: 106 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 273
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 274 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 441
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 442 WIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFVIDKRIYSM 591
+ + + + P D C FGS +H+ +E++ +DK+ + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.8 bits (131), Expect = 2e-10
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Frame = +1
Query: 82 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 246
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 247 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 420
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 421 SNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMD 561
NNG+ ++ + + + P D Q C KFGS ++ ++D
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +1
Query: 184 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 360
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 361 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGS 534
+L N A + V S+ G V W+ + + ++ P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 535 RMHNSDEMD 561
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.0 bits (119), Expect = 7e-09
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +1
Query: 103 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 267
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 268 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 438
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 439 SWIKRLDISTPISMQLDN--XPNDMQTCTXKFGSRMHNSDEM 558
+ TP+ + D+ P D+ CT S H S+E+
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 51.2 bits (117), Expect = 1e-08
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +1
Query: 118 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 282
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 283 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 453
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 454 LDISTPISMQLDNXPNDMQTCTXKFGS 534
L I M+L N P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 48.4 bits (110), Expect = 8e-08
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%)
Frame = +1
Query: 130 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 288
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 289 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 453
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 454 LDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFV 567
+ ++ M L P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.6 bits (103), Expect = 6e-07
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Frame = +1
Query: 130 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 288
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 289 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 453
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 454 LDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFV 567
+ ++ M L P D Q C+ + S +D++ F+
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 8e-07
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +1
Query: 109 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 276
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 277 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 429
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 430 GSVSWIKRLDISTPISMQLDNXPNDMQTC 516
GS++ RL I+ M L P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.0 bits (99), Expect = 2e-06
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +1
Query: 109 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 276
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 277 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 429
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 430 GSVSWIKRLDISTPISMQLDNXPNDMQTC 516
GS++ RL I+ M L P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Frame = +1
Query: 133 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 300
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 301 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 471
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 472 ISMQLDNXPNDMQTCTXKFGS 534
M L P D Q CT + S
Sbjct: 161 CMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.3 bits (80), Expect = 4e-04
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 274 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 426
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 427 NGSVSWIKRLDISTPISMQLDNXPNDMQTC 516
+GS++ RL I+ M L P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.9 bits (79), Expect = 5e-04
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 11/165 (6%)
Frame = +1
Query: 106 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 267
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 268 MNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNG 432
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 433 SVSWIKRLDISTPISMQLDNXPNDMQTCTXKFGSRMHNSDEMDFV 567
++ ++ +L + +M+ ++ P+D Q C+ S H + ++ F+
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 34.3 bits (75), Expect = 0.001
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 340 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNXPNDMQ 510
+ +WRPD NA + T + + + ++ ++ +L + +M P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 511 TCTXKFGSRMHNSDEMDFVID 573
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 29.9 bits (64), Expect = 0.030
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +1
Query: 346 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNXPNDMQTC 516
+W P V + N ++A T + + + +G V RL + ++L+ P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 517 TXKFGSRMHNSDEM 558
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.28
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 184 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 345
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 346 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNXPNDMQ 510
LW+PD LNA + AL + S+ N +V + R+ M+ P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 511 TC 516
C
Sbjct: 129 IC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 327 PSAAAPFPCVPTQS 286
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,396
Number of Sequences: 438
Number of extensions: 4568
Number of successful extensions: 89
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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