Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_G04
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016682-2|AAO38604.1|  891|Caenorhabditis elegans Argonaute (pl...    31   1.1  
AF016682-1|AAB66187.2|  910|Caenorhabditis elegans Argonaute (pl...    31   1.1  
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr...    30   1.4  
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik...    30   1.4  
Z81527-13|CAB04272.2|  343|Caenorhabditis elegans Hypothetical p...    29   4.3  
AL032644-4|CAA21665.1|  490|Caenorhabditis elegans Hypothetical ...    27   9.9  

>AF016682-2|AAO38604.1|  891|Caenorhabditis elegans Argonaute
           (plant)-like gene protein2, isoform b protein.
          Length = 891

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 92  EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 202
           E C +V  Q C +KL  V + T  +   +S P+RERE
Sbjct: 371 EVCDIVPGQRCLKKLTDVQTSTMIKATARSAPERERE 407


>AF016682-1|AAB66187.2|  910|Caenorhabditis elegans Argonaute
           (plant)-like gene protein2, isoform a protein.
          Length = 910

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 92  EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 202
           E C +V  Q C +KL  V + T  +   +S P+RERE
Sbjct: 390 EVCDIVPGQRCLKKLTDVQTSTMIKATARSAPERERE 426


>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
           protein F48F7.1 protein.
          Length = 1002

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 92  EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 202
           E C +V  Q C +KL  V + T  +   +S P+RERE
Sbjct: 485 EVCNIVPGQRCIKKLTDVQTSTMIKATARSAPERERE 521


>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
           protein F48F7.1 protein.
          Length = 1002

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 92  EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 202
           E C +V  Q C +KL  V + T  +   +S P+RERE
Sbjct: 485 EVCNIVPGQRCIKKLTDVQTSTMIKATARSAPERERE 521


>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
           protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 92  EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 202
           E C +V  Q C +KL  V + T  +   +S P+RERE
Sbjct: 493 EVCNIVPGQRCIKKLTDVQTSTMIKATARSAPERERE 529


>Z81527-13|CAB04272.2|  343|Caenorhabditis elegans Hypothetical
           protein F35E12.5 protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 312 NSXRGAIPPGGCSVVWHPPSSTVEFRGE--RGFDQK 211
           N   G+IPPG  S+V  P  ST  F+ +  +GF  K
Sbjct: 31  NGMSGSIPPGAASMVQVPAGSTCTFKFDIPKGFALK 66


>AL032644-4|CAA21665.1|  490|Caenorhabditis elegans Hypothetical
           protein Y51H1A.4 protein.
          Length = 490

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = +1

Query: 79  AIPPGAVLFGRSPKLQKE----TSAGLV--SHHCASPMTIWPTARKRRLT 210
           AIP  A   GR PK+ K+    +SA +V  S  C +P+   PTAR+R  T
Sbjct: 200 AIPSPAPR-GRPPKIAKDQLLLSSAAMVVASDDCLTPVPPTPTARRRSNT 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,137,935
Number of Sequences: 27780
Number of extensions: 315256
Number of successful extensions: 777
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)