Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_G01
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   4.5  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   4.5  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   4.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   7.8  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 203 VPASSRYKEEGEQFGFPSLSLQDS 274
           +P+  R +     F FPSLS +DS
Sbjct: 41  LPSIERDQMMAATFDFPSLSFEDS 64


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 203 VPASSRYKEEGEQFGFPSLSLQDS 274
           +P+  R +     F FPSLS +DS
Sbjct: 41  LPSIERDQMMAATFDFPSLSFEDS 64


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 203 VPASSRYKEEGEQFGFPSLSLQDS 274
           +P+  R +     F FPSLS +DS
Sbjct: 41  LPSIERDQMMAATFDFPSLSFEDS 64


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 17/65 (26%), Positives = 32/65 (49%)
 Frame = +2

Query: 194 GFNVPASSRYKEEGEQFGFPSLSLQDSKIAMLQNLAPNAMKAYKRKKLTFFPSSNLEKPE 373
           GFNV A+ + K+E  + G  SL   +    ++ N+        K++     P  ++E+  
Sbjct: 536 GFNVNATKQIKDEANKKGV-SLRFYNVVYKLIDNI--------KKEIYDILPEVDVEEIL 586

Query: 374 GEAEM 388
           GEA++
Sbjct: 587 GEAKV 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,237
Number of Sequences: 438
Number of extensions: 2408
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)