Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F21
(781 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 36 0.043
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.057
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.057
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.057
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 33 0.30
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 32 0.53
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 32 0.53
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.70
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.70
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.70
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.92
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.92
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.2
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 1.2
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 31 1.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 31 1.2
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 31 1.2
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 30 2.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 2.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 2.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 2.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 2.8
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.7
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.7
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 28 6.5
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 6.5
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 6.5
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.5
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 28 6.5
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 28 6.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 6.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGX--PPPPPPXXGGG 731
GGGGG GG GGG G PPPPPP GGG
Sbjct: 74 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGGG 731
GGGGG GG GGG PPPPPP GGG
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCA--------PPPPPPACGGG 64
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 35.5 bits (78), Expect = 0.043
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 654 GXGGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPP 758
G G G ++ PPPPPP GGG PPP
Sbjct: 25 GLGLGPQRPQQCCCPPPPPPPPCGGGYEAPPPPPP 59
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 699 PPPPPPXXGGGXFVXXXPPPXP 764
PPPPPP GG + PPP P
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPPP 60
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.057
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +3
Query: 603 GGXXXKXXXPPXXXXFGGX----GGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
GG PP GG GG G PPPPPP GG F PPP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG-FKGGPPPPPP 789
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXP 764
G PPPPPP G PPP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPP 747
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXPXK 770
G PPPPPP GG PPP K
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFK 781
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.057
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +3
Query: 603 GGXXXKXXXPPXXXXFGGX----GGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
GG PP GG GG G PPPPPP GG F PPP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG-FKGGPPPPPP 789
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXP 764
G PPPPPP G PPP P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPP 747
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXPXK 770
G PPPPPP GG PPP K
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFK 781
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.057
Identities = 22/58 (37%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +3
Query: 603 GGXXXKXXXPPXXXXFGGX----GGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
GG PP GG GG G PPPPPP GG F PPP P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG-FKGGPPPPPP 372
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXP 764
G PPPPPP G PPP P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPP 330
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXPXK 770
G PPPPPP GG PPP K
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFK 364
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGG 728
GGGGG PP GG GGG G PPP P GG
Sbjct: 43 GGGGGCA-----PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGG 728
GGGGG PP GG GGG G PPP P GG
Sbjct: 43 GGGGGCA-----PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXF----GGXGGGXKKKXXXXGXPPPPPP 716
GG GG PP + GG GGG + PPPPPP
Sbjct: 59 GGFGGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPP 103
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGXPPPPPPXXGGG 731
GG GG PPPPPP GGG
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGGG 222
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 763 GXGGGXXKTKXPPPXXGGGGGGXP 692
G GGG + PPP GGGG P
Sbjct: 203 GSGGGSGRFPPPPPPYGGGGRRRP 226
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 763 GXGGGXXKTKXPPPXXGGGGGGXP 692
G GGG PPP GG GGG P
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGAP 46
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 672 KKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
K++ G PPPPPP G PP P
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPP 258
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 672 KKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
K++ G PPPPPP G PP P
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPP 279
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 672 KKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
K++ G PPPPPP G PP P
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPP 264
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXP 764
G PPPPPP G + PPP P
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPP 338
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 630 PPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPPXPXK 770
PP FG G G G PPPPPP G + PPP P +
Sbjct: 319 PPPPSRFGPPGMG--------GMPPPPPP---GMRYPGGMPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXP 764
G PPPPPP G + PPP P
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPP 348
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 630 PPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPPXPXK 770
PP FG G G G PPPPPP G + PPP P +
Sbjct: 329 PPPPSRFGPPGMG--------GMPPPPPP---GMRYPGGMPPPPPPR 364
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPPXP 764
GGGGG PP G GGG PP P GGG PPP P
Sbjct: 22 GGGGGCGCAPPPPPPSPCGCGGGGG----LALPQLPPLSLPSLGGGG--GCCPPPAP 72
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGGGXFVXXXP 752
GGGGG PP GG GGG G P GGG P
Sbjct: 61 GGGGGCCP----PPAPACGGGCGGGVAPAPIGGGYAQAPQAPIGGGYAAPQAP 109
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGG-GXFVXXXPPPXP 764
G GGG PP GG GG PPPPPP G + PPP P
Sbjct: 652 GSGGGSSMPMPVPPP----GGLGG-------FMPPPPPPPPMPGDLSSLLAAAPPPPP 698
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGX----PPPPPPXXGGGXFVXXXPPPXP 764
GG G K G P P PP G G F+ PPP P
Sbjct: 640 GGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGG-GXFVXXXPPPXP 764
G GGG PP GG GG PPPPPP G + PPP P
Sbjct: 652 GSGGGSSMPMPVPPP----GGLGG-------FMPPPPPPPPMPGDLSSLLAAAPPPPP 698
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGX----PPPPPPXXGGGXFVXXXPPPXP 764
GG G K G P P PP G G F+ PPP P
Sbjct: 640 GGAGAKANKGWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 597 GGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPP 716
GGGG +GG GG G PPPPPP
Sbjct: 32 GGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPP 71
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 772 FXXGXGGGXXKTKXPPPXXGGGGGGXP 692
F G GGG PPP G GGG P
Sbjct: 19 FPSGGGGGCGCAPPPPPACGCGGGAAP 45
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXPXKK 773
G PPPPPP F PPP K
Sbjct: 1010 GGPPPPPPPPPADFFANIAPPPVDADK 1036
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 693 GXPPPPPPXXGGGXFVXXXPPPXPXKK 773
G PPPPPP F PPP K
Sbjct: 249 GGPPPPPPPPPADFFANIAPPPVDADK 275
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGXPPPPPPXXGGG 731
GG GGG G PPPPP GGG
Sbjct: 34 GGCGGGC---GGGCGCAPPPPPCCGGG 57
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 763 GXGGGXXKTKXPPPXXGGGGGG 698
G GGG PPP GGG GG
Sbjct: 39 GCGGGCGCAPPPPPCCGGGCGG 60
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 699 PPPPPPXXGGGXFVXXXPPPXP 764
PPPPPP G PPP P
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPP 524
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGXPPPPPPXXGGGXFVXXXPPP 758
GG GGG PPPPP G PPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 693 GXPPPPP-PXXGGGXFVXXXPPPXP 764
G PPPPP P G G PPP P
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 693 GXPPPPP-PXXGGGXFVXXXPPPXP 764
G PPPPP P G G PPP P
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +3
Query: 693 GXPPPPP-PXXGGGXFVXXXPPPXP 764
G PPPPP P G G PPP P
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPPPPPP 242
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 763 GXGGGXXKTKXPPPXXGGGGGG 698
G GGG + PPP GGGGGG
Sbjct: 266 GGGGGYPQ---PPPQQGGGGGG 284
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKKXXXXGXPPPPPPXXGGGXFV 740
GGGGG PP GG GGG PPP GG V
Sbjct: 22 GGGGGCGCAPPPPPPACGCGGGGGG-------YAAPPPAYAAPAGGYAV 63
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGXPPPPPPXXGGG 731
GG GG PPPPP GGG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGG 76
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 651 GGXGGGXKKKXXXXGXPPPPPPXXGGG 731
GG GG PPPPP GGG
Sbjct: 50 GGGGGSYAAAPALPPPPPPPPAPIGGG 76
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 16 GILEALVGLLDFASQWHYTRLVVTQISATMSGXLNV 123
G+L V +L SQ YT+++++ + T G + V
Sbjct: 876 GVLHMYVDILSSTSQLEYTKVIISSLDYTNEGMVRV 911
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 8/54 (14%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGG--------GXKKKXXXXGXPPPPPPXXGGG 731
GGGGG + P GG G + G PPPPPP G
Sbjct: 22 GGGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFG 75
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 8/54 (14%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGG--------GXKKKXXXXGXPPPPPPXXGGG 731
GGGGG + P GG G + G PPPPPP G
Sbjct: 22 GGGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFG 75
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 8/54 (14%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGG--------GXKKKXXXXGXPPPPPPXXGGG 731
GGGGG + P GG G + G PPPPPP G
Sbjct: 22 GGGGGGCCQPSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFG 75
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 16 GILEALVGLLDFASQWHYTRLVVTQISATMSGXLNV 123
G+L V +L SQ YT+++++ + T G + V
Sbjct: 876 GVLHMYVDILSSTSQLEYTKVIISSLDYTNEGMVRV 911
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 594 GGGGGXXXKXXXPPXXXXFGGXGGGXKKK 680
GGGGG PP GG G G +KK
Sbjct: 34 GGGGGGGGCCAPPPPPPVCGGCGCGGRKK 62
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 699 PPPPPPXXGGGXFVXXXPPPXP 764
PPPPPP PPP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPP 1361
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 663 GGXKKKXXXXGXPPPPPPXXGGGXFVXXXPP 755
GG G PPPPPP G G V PP
Sbjct: 102 GGIPPPPPMFGAPPPPPPPSGLG--VAPQPP 130
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 699 PPPPPPXXGGGXFVXXXPPPXP 764
PPPPPP G PPP P
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 699 PPPPPPXXGGGXFVXXXPPPXP 764
PPPPPP G PPP P
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPP 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,243,294
Number of Sequences: 27780
Number of extensions: 254045
Number of successful extensions: 2462
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2004
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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