Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F13
(848 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 32 0.66
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 31 1.5
11_06_0611 + 25461469-25461655,25461670-25462238 31 1.5
10_08_0222 - 15983756-15984313 30 2.0
05_03_0597 + 16014809-16015120,16015234-16015398,16015497-160159... 30 2.7
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.7
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 4.7
06_01_0690 + 5033943-5034740 29 4.7
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 4.7
04_04_1125 + 31085106-31085714 29 4.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.7
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 29 4.7
01_06_0146 + 26969011-26969995,26970878-26970930 29 4.7
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 29 6.2
12_02_1174 - 26696869-26698191 28 8.2
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.9 bits (69), Expect = 0.66
Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 4/71 (5%)
Frame = +3
Query: 333 PXPPXPXPXXPRGPXGPGXXGXAGVXXPXXA----GVPXVGLXPPAXLXXAXPGXXPXPX 500
P P P P P GP G + P G P G+ P PG P P
Sbjct: 191 PGVPPAFPGGPPPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPP 250
Query: 501 XPARPXXVXPQ 533
P +P PQ
Sbjct: 251 GPQQPGQNPPQ 261
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 677 PXPRAPXXGXXPXPXG--GPXAXALXAXGXPGRXAPPRXPXRASAXPXSP 820
P P AP G P P P A A PG PP P A P +P
Sbjct: 40 PPPFAPPGGNGPVPSSIRAPQAPPPGARPFPGSPPPPSQPPPPFARPAAP 89
>11_06_0611 + 25461469-25461655,25461670-25462238
Length = 251
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/61 (36%), Positives = 24/61 (39%)
Frame = +2
Query: 653 ARXAPXXXPXPRAPXXGXXPXPXGGPXAXALXAXGXPGRXAPPRXPXRASAXPXSPGGPX 832
A A P P P G G A + A P R PPR P RAS P +P G
Sbjct: 136 ATAAAVGPPPPPFPQSGLQIWRREG--APTIHAVAPPRRPPPPRLPSRAS--PLAPAGSD 191
Query: 833 G 835
G
Sbjct: 192 G 192
>10_08_0222 - 15983756-15984313
Length = 185
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/84 (28%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Frame = -2
Query: 568 PAXXXLAXGVXXXGXTXXGRAGXXGXGXXPGXAQXRXAGGXSPTXGTPAXXGSXTPAX-- 395
P A G G + G+ G G G G + AGG P G A G
Sbjct: 103 PYGGGYAQGGGGGGGSGGGQNGGSGSGSGSGSGSGQ-AGGYGPYGGGYAQAGGQGGGGGG 161
Query: 394 -PXXPGPXGPRGXXGXGXGGXGFP 326
PG G G G G G+P
Sbjct: 162 GQSGPGGSGSGSGSGSGSGSAGYP 185
>05_03_0597 +
16014809-16015120,16015234-16015398,16015497-16015957,
16016057-16016233,16016331-16016679
Length = 487
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/64 (34%), Positives = 25/64 (39%)
Frame = -2
Query: 514 GRAGXXGXGXXPGXAQXRXAGGXSPTXGTPAXXGSXTPAXPXXPGPXGPRGXXGXGXGGX 335
GR G G G P A +G P+ A G T P P G G G G GG
Sbjct: 413 GRGG--GGGRAPAPAPPT-SGAIRPSAVAAAQQGPYT--LEMLPNPAGLYGGYGAGAGGA 467
Query: 334 GFPQ 323
FP+
Sbjct: 468 AFPR 471
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 665 PXXXPXPRAPXXGXXPXPXGGPXAXAL--XAXGXPGRXAPPRXPXRASAXPXSPGGPXG 835
P P P A G P P P A A PG PP R P P P G
Sbjct: 334 PPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGG 392
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +3
Query: 327 GXPXPPXPXPXXPRGPXGPGXXGXAGVXXPXXAGVPXVGLXPPA 458
G PP P P P P PG G P AG G PPA
Sbjct: 346 GSGPPPPPPPAAPAAPRPPG-PGPGPPPPPGAAGRGGGGPPPPA 388
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 256 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 167
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = +2
Query: 665 PXXXPXPRAPXXGXXPXPX--GGPXAXALXAXGXPGRXAPPRXPXRASAXPXSPGGPXG 835
P P P P G P P G G G PP AS P +PG P G
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGVPTG 398
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +3
Query: 339 PPXPXPXXPRGPXGPGXXGXAGVXXPXXAGVPXVGLXPPAXLXXAXPGXXPXPXXPARPX 518
PP P P P GP P + P A P + PP P P P
Sbjct: 19 PPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQ 78
Query: 519 XVXP 530
P
Sbjct: 79 QQQP 82
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 665 PXXXPXPRAPXXGXXPXPXGGPXAXALXAXGXPGRXAPPRXP 790
P P P+ P G P P G P P PP P
Sbjct: 27 PYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQP 68
>06_01_0690 + 5033943-5034740
Length = 265
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = -2
Query: 577 GXXPAXXXLAXGVXXXGXTXXGRAGXXGXGXXPGXAQXRXAGGXSPTXGTPAXXGSXTPA 398
G P A G G G+ G G G G + AGG P G G
Sbjct: 180 GYGPYGGGYAQGGGGGGGGGGGQNGGSGYGSGSGSGYGQ-AGGYGPYGGYAQAGGQGGGG 238
Query: 397 XPXXPGPXGPRGXXGXGXG 341
GP G G G G
Sbjct: 239 GGGQSGPGGSGSGSGSGSG 257
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -3
Query: 828 GPPGEXGXADARXGCLGGAXRPGXPXAXRAXAXGPPXGXG-XXPXXGARGXGXXXG 664
G P G R GC GG R G R G P G G P G G G G
Sbjct: 14 GNPRGGGGGGPR-GCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDGGLGCGRG 68
>04_04_1125 + 31085106-31085714
Length = 202
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +3
Query: 333 PXPPXPXPXXPRGPXGPGXXGXAGVXXPXXA-GVPXVGLXPPAXLXXAXPGXXPXP-XXP 506
P PP P P P P P A P P PP A P P P P
Sbjct: 46 PPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPPTPAPAP 105
Query: 507 ARPXXVXP 530
+ P P
Sbjct: 106 STPTGKCP 113
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = -2
Query: 508 AGXXGXGXXPGXAQXRXAGGXSPTXGTPAXXGSXTP-AXPXXPGPXGPRGXXGXGXGGXG 332
AG G G P A A P G G TP P P P G G GG G
Sbjct: 1167 AGFRG-GTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRG 1225
Query: 331 FPQXP 317
P P
Sbjct: 1226 LPAPP 1230
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 29.1 bits (62), Expect = 4.7
Identities = 28/97 (28%), Positives = 32/97 (32%), Gaps = 4/97 (4%)
Frame = +3
Query: 327 GXPXPPXPXPXXPRGPXGPGXXGXAGVXXPXXAGVPXVGLXPPAXLXXAXPGXXPXPXXP 506
G P P P P PG G V G P G PP + PG P P
Sbjct: 103 GAPLMPGVRPPILPAPGIPGYPGAPNVPTMPQTGAPP-GSMPPGSM---PPGSMPMQMAP 158
Query: 507 -ARPXXV-XPQXXTPXAXXXXAGXXPC--XXXPPRXA 605
RP + P P A +G P PP+ A
Sbjct: 159 LPRPPTLPPPTSGAPGAPIPNSGAPPAMYQTNPPQPA 195
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = +2
Query: 665 PXXXPXPRAPXXGXXPXPXGGPXAXALXAXGXPGRXAPPRXPXRASAXPXSPGGP 829
P P P P P P P P + APP P P +PG P
Sbjct: 82 PTADPSPPLPHDNRTPQPRAAPPPAPA-----PDQPAPPSPPPSLPPSPPAPGSP 131
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 363 PRGPXGPGXXGXAGVXXPXXAGVPXVGLXPPAXLXXAXPGXXPXPXXPARPXXVXPQ 533
P P P G + VG PP A P P PARP P+
Sbjct: 677 PPPPAAPASGGGDAAAPLAKSATKSVGFAPPPLQPPARPAQHPHLQPPARPAQQPPR 733
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/89 (25%), Positives = 28/89 (31%)
Frame = +3
Query: 333 PXPPXPXPXXPRGPXGPGXXGXAGVXXPXXAGVPXVGLXPPAXLXXAXPGXXPXPXXPAR 512
P PP P P PR P V P P PP+ + P P +
Sbjct: 155 PPPPPPPPPPPRPP---------SVKPPVVQPKPQ---PPPSLQPPSPPPPPPTRPPSVK 202
Query: 513 PXXVXPQXXTPXAXXXXAGXXPCXXXPPR 599
P V P+ P + P PPR
Sbjct: 203 PPVVQPKPQPPPTLPPPSPPPPPPTVPPR 231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,484,409
Number of Sequences: 37544
Number of extensions: 309594
Number of successful extensions: 1166
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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