Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F08
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 39 0.005
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 39 0.005
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 39 0.005
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 39 0.005
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 39 0.005
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 39 0.005
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 37 0.015
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 37 0.015
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 36 0.027
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.047
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 35 0.082
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 35 0.082
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 34 0.11
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 34 0.11
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.19
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 33 0.19
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 33 0.19
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.19
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 33 0.25
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.25
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 33 0.33
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 33 0.33
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 33 0.33
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 33 0.33
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 32 0.44
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 32 0.44
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 32 0.44
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.44
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.44
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 32 0.44
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 32 0.44
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 32 0.44
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 0.77
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 31 1.0
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 31 1.0
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.3
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 31 1.3
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 31 1.3
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 31 1.3
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 30 1.8
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 30 1.8
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 30 1.8
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 30 1.8
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 30 1.8
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 30 2.3
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 30 2.3
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 30 2.3
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 30 2.3
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 29 4.1
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 29 4.1
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 29 4.1
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 29 4.1
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 29 4.1
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 29 4.1
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 29 4.1
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 29 5.4
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.4
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.4
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 29 5.4
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 7.1
U88315-5|ABO16438.1| 355|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 28 7.1
AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical ... 28 7.1
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.4
U14524-1|AAA50785.1| 461|Caenorhabditis elegans avermectin-sens... 28 9.4
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 9.4
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 28 9.4
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 284
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XMG 293
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 284
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XMG 293
G
Sbjct: 130 LFG 132
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 54 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRI 230
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 231 LADLQMNWIDKRLSWNAGXM-GLQH 302
L + W D LSW G++H
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKH 139
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 284
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XMG 293
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 284
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XMG 293
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 284
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XMG 293
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 284
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 285 XMG 293
G
Sbjct: 130 LFG 132
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 316 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIK-RLDISTPISMQLDXWPND 483
SERLW P+V +N+ +T + + NG+V W+ R+ +S P S +L +P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTV-WLNYRVQVSAPCSFELSRFPID 170
Query: 484 MQTWHV 501
Q H+
Sbjct: 171 AQECHL 176
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +1
Query: 286 EWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSN-NGSVSWIKRLDISTPISM 459
+WG S ++W P++V +N +T+ G + +N G + +TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 460 QLDXWPNDMQ 489
Q + +PNDMQ
Sbjct: 186 QYEDYPNDMQ 195
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +3
Query: 69 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 248
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 249 NWIDKRLSWNAGXMGLQHL 305
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 132 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 281
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.047
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 111 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 269
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 270 SWNA 281
SWNA
Sbjct: 110 SWNA 113
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 459
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 460 QLDXWPNDMQ 489
++ +P D Q
Sbjct: 154 DVEFFPFDRQ 163
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 459
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 460 QLDXWPNDMQ 489
++ +P D Q
Sbjct: 154 DVEFFPFDRQ 163
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V S+R+W PD+VL NA + V ++G V+W+ + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 487 Q 489
Q
Sbjct: 197 Q 197
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V S+R+W PD+VL NA + V ++G V+W+ + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 487 Q 489
Q
Sbjct: 197 Q 197
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 174 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 281
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTWH 498
++WRPD++L N+A+ + V N G V+WI M + +P D Q +
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCY 107
Query: 499 VQ 504
++
Sbjct: 108 LK 109
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +1
Query: 286 EWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISM 459
E+G T L + LW+PD++L N+A + + VS+NG V + +S S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 460 QLDXWPNDMQTWHVQ 504
+ +P D Q +++
Sbjct: 152 SMTWFPYDQQVCYLK 166
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 273 W 275
W
Sbjct: 85 W 85
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 72 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 230
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 231 LADLQMNWIDKRLSWN 278
+ W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 147 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXM-GLQHL 305
PP +I + L++ ++ + E E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 313 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSV 417
+S +LWRPDV+L N+ + + Y+ R VS+NG V
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDV 138
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDXWPND 483
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 484 MQ 489
Q
Sbjct: 161 QQ 162
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDXWPND 483
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 484 MQ 489
Q
Sbjct: 161 QQ 162
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSWIKRLDISTPISMQLDXWPND 483
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 484 MQ 489
Q
Sbjct: 145 QQ 146
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 108 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 273 WN 278
W+
Sbjct: 90 WD 91
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 468
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 469 XWPNDMQTWHVQ 504
+P D Q H++
Sbjct: 157 WFPFDEQQCHLK 168
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 108 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 273 WN 278
W+
Sbjct: 90 WD 91
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 468
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 469 XWPNDMQTWHVQ 504
+P D Q H++
Sbjct: 157 WFPFDEQQCHLK 168
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 108 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 273 WN 278
W+
Sbjct: 90 WD 91
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLD 468
G + V E +W PD+VL N A + + +A + G V+W + + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 469 XWPNDMQTWHVQ 504
+P D Q H++
Sbjct: 157 WFPFDEQQCHLK 168
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 165 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 278
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 165 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 278
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 304 WL-VSSERLWRPDVVLLNAA-ATTAGDYALR-ARVSNNGSVSWIKRLDISTPISMQLDXW 474
W+ +S+ R W PDV+ N D ++ A + NG + + +S+P +++D +
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 475 PNDMQTWHV 501
P D+Q ++
Sbjct: 160 PYDVQKCNI 168
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQT 492
++W+PDV NA + + +GS+ + R+ + ++ L+ WP D Q
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 493 WHVQ 504
H++
Sbjct: 170 CHLR 173
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQT 492
++W+PDV NA + + +GS+ + R+ + ++ L+ WP D Q
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 493 WHVQ 504
H++
Sbjct: 170 CHLR 173
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 147 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 278
PP +++ + + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 286 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPIS 456
EW G ++ ++W PD + N T ++ R R V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 457 MQLDXWPNDMQTWHVQXSXLGCTIXTXWISVIDXTIYRMSXXGAXDV 597
+ +P D+Q +Q +V+D + + S D+
Sbjct: 163 VL--SFPFDVQLCALQFGSWSYQAHAISFNVLDTFVPKKSKNSEWDI 207
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Frame = +1
Query: 286 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPIS 456
EW G ++ ++W PD + N T ++ R R V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 457 MQLDXWPNDMQTWHVQXSXLGCTIXTXWISVIDXTIYRMSXXGAXDV 597
+ +P D+Q +Q +V+D + + S D+
Sbjct: 163 VL--SFPFDVQLCALQFGSWSYQAHAISFNVLDTFVPKKSKNSEWDI 207
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 325 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
+W+PDV+L N+ + + A V G+V+WI I + ++ + +P D Q
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQ 161
>Z74040-6|CAA98509.2| 457|Caenorhabditis elegans Hypothetical
protein K10D6.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK-RLDISTPISMQLDXWPNDM 486
E+LW P+ +N+ D + + NG+V W+ R+++ P + L+ +P D+
Sbjct: 134 EQLWTPNSCFVNSKFAEIHDSPFKNVFLMIYPNGTV-WVNYRVNVKGPCDLSLELFPLDI 192
Query: 487 QTWHV 501
Q H+
Sbjct: 193 QECHL 197
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 174 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 278
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 132 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 281
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 313 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
SS+ +W+PDV+L N+AA + + G+V WI + + + +P D Q
Sbjct: 105 SSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQ 164
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
R+W+PD++L+N A A + V+++G+V+W+ + +++ +P D Q
Sbjct: 193 RIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWLFSALFRSSCPIRVRYYPFDDQ 250
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 325 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
+W+PDV+L N+ + + A V G+V+WI I + ++ + +P D Q
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQ 161
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V+ E++W PD+VL NA + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 487 Q 489
Q
Sbjct: 175 Q 175
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPND 483
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 484 MQ 489
Q
Sbjct: 166 QQ 167
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 286 EWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 459
+WG ++ + S+++W PD+VL NA A++ ++G V W + +
Sbjct: 96 DWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVWQPPSIYKSFCPI 155
Query: 460 QLDXWPNDMQT 492
+ +P D QT
Sbjct: 156 NIKYFPYDWQT 166
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 99 LSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRESESTVRILADLQMNWIDK 263
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 264 RLSWNAGXMG 293
+L+WN G
Sbjct: 89 KLTWNPTDWG 98
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V+ E++W PD+VL NA + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 487 Q 489
Q
Sbjct: 175 Q 175
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V+ E++W PD+VL NA + + + G+V W+ + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 487 Q 489
Q
Sbjct: 175 Q 175
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPND 483
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 484 MQ 489
Q
Sbjct: 166 QQ 167
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 319 ERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
E LW PD++L NA + + VS G V+W + ++ ++ +P D+Q
Sbjct: 85 EMLWLPDIILYNNAHGSPWVSETTQVHVSFEGRVTWQPPVVYDAFCNIDIEWYPYDLQ 142
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNA---GXMGLQHLAG 311
++ E + + + L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
VS +++W PD+VL NA + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 487 Q 489
Q
Sbjct: 167 Q 167
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
VS +++W PD+VL NA + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 487 Q 489
Q
Sbjct: 167 Q 167
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
VS +++W PD+VL NA + +++ G + W+ + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 487 Q 489
Q
Sbjct: 167 Q 167
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATTAGD-YALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
+LW PDV++ N+A YA V NG V+W+ +Q+ +P D+Q
Sbjct: 106 QLWTPDVLMYNSADPQFDSRYASNLLVYPNGLVNWMPPGLYRLSCKIQVVWFPFDVQ 162
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 283 GEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSWIKRLDISTPIS 456
G WG L V +++W PD++L N A + A V NG V W + S
Sbjct: 91 GRWGKIRKLHVPVDQIWIPDILLYNNADGEPHITIMSDAIVYYNGLVVWKPPSIYKSFCS 150
Query: 457 MQLDXWPNDMQT 492
+ ++ +P D QT
Sbjct: 151 IDIEYFPYDTQT 162
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 468
G T V +++W PD+VL NA + V + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 469 XWPNDMQ 489
+P D Q
Sbjct: 157 FFPFDEQ 163
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
++W+PDV+L N+ T Y V + G V W+ + + +P D Q
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQ 159
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLD 468
G T V +++W PD+VL NA + V + G + W+ + + ++
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 469 XWPNDMQ 489
+P D Q
Sbjct: 157 FFPFDEQ 163
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
++W+PDV+L N+ T Y V + G V W+ + + +P D Q
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQ 159
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
++W+PDV+L N+ T Y V + G V W+ + + +P D Q
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQ 159
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +1
Query: 322 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
++W+PDV+L N+ T Y V + G V W+ + + +P D Q
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQ 159
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 84 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 257
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 258 DKRLSWN 278
D RL WN
Sbjct: 93 DDRLMWN 99
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRA---RVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
+RLW P+ +N+ + R+ + NG+V R+ + P S+ L +P D+Q
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 78 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 251
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 252 -WIDKRLSW 275
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 180 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 278
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYALRARVSNN--GSVSWIKRLDISTPISMQLDXWPND 483
+ S+++W+PD++L N A + V + G++ W ++ + + +P D
Sbjct: 76 IPSDKIWKPDIILYNNADAQYMKSVMSTDVIVDYLGNIHWPLSAIFTSSCPLDVKHYPFD 135
Query: 484 MQT 492
QT
Sbjct: 136 RQT 138
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSW 423
G T + S+ +W PD+VL N AA L A V+ G+V W
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYW 152
>Z67737-6|CAA91540.3| 399|Caenorhabditis elegans Hypothetical
protein T01H10.7 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +3
Query: 132 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
Y+ +P V+L +L+ + E E V ++ ++ W D R++W++ G
Sbjct: 64 YNPLAPKRFNYTVSL-YYLKLVEVIEPEEKVSVVLEMAEYWYDPRIAWDSSLYG 116
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 174 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 278
L L+ + E + V ++ ++ W D RL+WN
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>U88315-5|ABO16438.1| 355|Caenorhabditis elegans Hypothetical
protein C37H5.14 protein.
Length = 355
Score = 28.3 bits (60), Expect = 7.1
Identities = 9/49 (18%), Positives = 26/49 (53%)
Frame = +1
Query: 358 AATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTWHVQ 504
AA+T+ + + + ++++R+ +S ++ D W N+ W+++
Sbjct: 16 AASTSSHQCIGEKGDRQSAAAFLRRMSVSFKLAPVGDYWANNENRWNIE 64
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYALR-ARVSNNGSVSW 423
G T + S+ +W PD+VL N AA L A V+ G+V W
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYW 152
>AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical
protein W10G11.16 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
E++WRPD NA + R+ +G V + R+ I ++ L +P+D Q
Sbjct: 35 EKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 94
Query: 490 T 492
T
Sbjct: 95 T 95
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 168 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNA 281
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Z92830-9|CAB07361.2| 461|Caenorhabditis elegans Hypothetical
protein F11A5.10 protein.
Length = 461
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 307 LVSSERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWP 477
L ++W PD N A T + R+ N+G+V + R+ + M L +P
Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYP 199
Query: 478 NDMQ 489
D+Q
Sbjct: 200 MDVQ 203
>Z82262-4|CAE17770.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.9 protein.
Length = 679
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/69 (23%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
E++WRPD ++N+ + + +R R++ G V++ R+ M +P+D Q
Sbjct: 397 EQIWRPDPYIVNSKHSYFHYVSFPNIRMRITPEGLVTYTVRVSSVCSCFMSFCLYPHDRQ 456
Query: 490 TWHVQXSXL 516
++ S +
Sbjct: 457 ECDLRISSI 465
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = -1
Query: 436 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSP 290
P A RRRS G RSPRR P A R+ S R+P + SP
Sbjct: 461 PQAPRRRRSP---SGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSP 506
>U14524-1|AAA50785.1| 461|Caenorhabditis elegans
avermectin-sensitive glutamate-gated chloride channel
GluCl alpha protein.
Length = 461
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 307 LVSSERLWRPDVVLLN---AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWP 477
L ++W PD N A T + R+ N+G+V + R+ + M L +P
Sbjct: 140 LTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYP 199
Query: 478 NDMQ 489
D+Q
Sbjct: 200 MDVQ 203
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 108 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 272
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 273 WN 278
WN
Sbjct: 104 WN 105
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIK-RLDISTPISMQLDXWPNDM 486
E+LW P+V +N+ T ++ + + NG+V W+ RL + +P + L +P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTV-WVNYRLQVQSPCMVDLVLFPMDI 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,995,416
Number of Sequences: 27780
Number of extensions: 332375
Number of successful extensions: 1177
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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