Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F08
(832 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 3e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 35 8e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 34 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 33 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 33 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 32 0.006
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 32 0.006
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 32 0.007
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 32 0.007
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.013
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.017
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.030
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.040
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.070
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.092
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.092
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.86
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.1
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +1
Query: 292 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 444
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 445 TPISMQLDXWPNDMQTWHVQXSXLGCTI 528
M L +P D Q H++ G T+
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIESFGYTM 163
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 254
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 255 IDKRLSW 275
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +1
Query: 292 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 444
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 445 TPISMQLDXWPNDMQTWHVQXSXLGCTI 528
M L +P D Q H++ G T+
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIESFGYTM 163
Score = 22.2 bits (45), Expect = 6.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 254
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 255 IDKRLSW 275
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 36.7 bits (81), Expect = 3e-04
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = +1
Query: 292 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 444
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 445 TPISMQLDXWPNDMQTWHVQXSXLGCTI 528
M L +P D Q H++ G T+
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIESFGYTM 102
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.9 bits (79), Expect = 5e-04
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWP 477
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 478 NDMQT 492
D+QT
Sbjct: 162 YDVQT 166
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V S+ +WRPD+VL NA A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 487 QT 492
QT
Sbjct: 165 QT 166
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 35.1 bits (77), Expect = 8e-04
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
V S+ +WRPD+VL NA A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 487 QT 492
QT
Sbjct: 161 QT 162
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.001
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 487 QT 492
QT
Sbjct: 163 QT 164
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 33.5 bits (73), Expect = 0.002
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 490 T 492
+
Sbjct: 175 S 175
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 81 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 245
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 246 MNWIDKRLSWNA 281
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 33.5 bits (73), Expect = 0.002
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 286 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 459
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 460 QLDXWPNDMQT 492
+ +P D QT
Sbjct: 148 DVRYFPFDQQT 158
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 254
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 255 IDKRLSWNAG 284
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.006
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 487 Q 489
Q
Sbjct: 160 Q 160
Score = 21.8 bits (44), Expect = 8.0
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 60 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 224
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 225 RILADLQMNWIDKRLSWNAGXMG 293
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 32.3 bits (70), Expect = 0.006
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 459
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 460 QLDXWPNDMQT 492
++ +P D Q+
Sbjct: 161 NVEYFPFDEQS 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.007
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 292 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 459
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 460 QLDXWPNDMQT 492
++ +P D QT
Sbjct: 148 DVEYFPFDEQT 158
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.007
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPND 483
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 484 MQ 489
Q
Sbjct: 142 EQ 143
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 487 Q 489
Q
Sbjct: 191 Q 191
Score = 25.0 bits (52), Expect = 0.86
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 273 WNAGXMG 293
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 487 Q 489
Q
Sbjct: 191 Q 191
Score = 25.0 bits (52), Expect = 0.86
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 272
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 273 WNAGXMG 293
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.017
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 487 Q 489
Q
Sbjct: 123 Q 123
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.030
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 487 Q 489
Q
Sbjct: 123 Q 123
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.040
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 487 Q 489
Q
Sbjct: 123 Q 123
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.070
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 487 Q 489
Q
Sbjct: 123 Q 123
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.092
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 487 Q 489
Q
Sbjct: 123 Q 123
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.092
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 486
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 487 Q 489
Q
Sbjct: 123 Q 123
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 198 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 293
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.86
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPND 483
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 484 MQ 489
+Q
Sbjct: 127 IQ 128
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +1
Query: 319 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 489
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 490 TWHVQXSXLGCT 525
+Q L T
Sbjct: 176 ECKLQMESLSHT 187
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,675
Number of Sequences: 438
Number of extensions: 4267
Number of successful extensions: 45
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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