Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F07
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 279 2e-75
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 279 2e-75
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 279 2e-75
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 236 1e-62
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 173 1e-43
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 173 1e-43
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 158 5e-39
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 73 2e-13
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 73 2e-13
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 73 2e-13
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 67 1e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 67 1e-11
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 51 9e-07
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 49 3e-06
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 5e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 40 0.003
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.19
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.99
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.99
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.99
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.99
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 3.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 3.0
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.3
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 279 bits (684), Expect = 2e-75
Identities = 131/144 (90%), Positives = 134/144 (93%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGT 527
DKLKAERERGITIDIALWKFET+KYY+TIIDAP HR FI NMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 528 GEFXXGISXNGQTREHALLAFTLG 599
GEF GIS NGQTREHALLA TLG
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLG 144
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 279 bits (684), Expect = 2e-75
Identities = 131/144 (90%), Positives = 134/144 (93%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGT 527
DKLKAERERGITIDIALWKFET+KYY+TIIDAP HR FI NMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 528 GEFXXGISXNGQTREHALLAFTLG 599
GEF GIS NGQTREHALLA TLG
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLG 144
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 598 GVXXLIVXXNXMDSXEPPY 654
GV LIV N MDS EPP+
Sbjct: 144 GVKQLIVACNKMDSTEPPF 162
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 279 bits (684), Expect = 2e-75
Identities = 131/144 (90%), Positives = 134/144 (93%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGT 527
DKLKAERERGITIDIALWKFET+KYY+TIIDAP HR FI NMITGTSQADCAVL+V GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 528 GEFXXGISXNGQTREHALLAFTLG 599
GEF GIS NGQTREHALLA TLG
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLG 144
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 598 GVXXLIVXXNXMDSXEPPY 654
GV LIV N MDS EPP+
Sbjct: 144 GVKQLIVACNKMDSTEPPF 162
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 236 bits (578), Expect = 1e-62
Identities = 109/116 (93%), Positives = 112/116 (96%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIV 515
DKLKAERERGITIDIALWKFET+KYY+TIIDAP HR FI NMITGTSQADCAVL+V
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 173 bits (422), Expect = 1e-43
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = +3
Query: 177 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 356
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 357 KAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGEF 536
+ ERERG+T+DI FETS + ++DAP H+ FI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 537 XXGISXNGQTREHALLAFTLG 599
G GQT+EHALL +LG
Sbjct: 287 ETGFENGGQTKEHALLLRSLG 307
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 173 bits (422), Expect = 1e-43
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = +3
Query: 177 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 356
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 357 KAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGEF 536
+ ERERG+T+DI FETS + ++DAP H+ FI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 537 XXGISXNGQTREHALLAFTLG 599
G GQT+EHALL +LG
Sbjct: 305 ETGFENGGQTKEHALLLRSLG 325
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 158 bits (383), Expect = 5e-39
Identities = 71/143 (49%), Positives = 98/143 (68%)
Frame = +3
Query: 171 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 350
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 351 KLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTG 530
ERE+G T+++ FET K + TI+DAP H+ F+ NMI G +QAD AVL++ A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 531 EFXXGISXNGQTREHALLAFTLG 599
EF G GQTREH++L T G
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAG 246
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAER 368
DKLK +
Sbjct: 61 DKLKVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/142 (34%), Positives = 69/142 (48%)
Frame = +3
Query: 174 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGE 533
E+ RGITI+ ++ET+K + ID P H +I NMITG +Q + A+L+V A G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 534 FXXGISXNGQTREHALLAFTLG 599
QTREH LLA +G
Sbjct: 150 MP-------QTREHLLLARQVG 164
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/142 (34%), Positives = 69/142 (48%)
Frame = +3
Query: 174 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGE 533
E+ RGITI+ ++ET+K + ID P H +I NMITG +Q + A+L+V A G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 534 FXXGISXNGQTREHALLAFTLG 599
QTREH LLA +G
Sbjct: 151 MP-------QTREHLLLARQVG 165
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/142 (34%), Positives = 69/142 (48%)
Frame = +3
Query: 174 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
++K H+N+ IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGE 533
E+ RGITI+ ++ET+K + ID P H +I NMITG +Q + A+L+V A G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 534 FXXGISXNGQTREHALLAFTLG 599
QTREH LLA +G
Sbjct: 151 MP-------QTREHLLLARQVG 165
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 67.3 bits (157), Expect = 1e-11
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +3
Query: 180 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGE 533
K E++RGITI++A +E+ + D P H FI NMI GTSQ D AVL++ A G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 534 FXXGISXNGQTREHALLAFTLG 599
QT+EH +LA +G
Sbjct: 146 ME-------QTKEHLILAKQVG 160
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 67.3 bits (157), Expect = 1e-11
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Frame = +3
Query: 180 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 353
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 354 LKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGE 533
K E++RGITI++A +E+ + D P H FI NMI GTSQ D AVL++ A G
Sbjct: 86 GKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGV 145
Query: 534 FXXGISXNGQTREHALLAFTLG 599
QT+EH +LA +G
Sbjct: 146 ME-------QTKEHLILAKQVG 160
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 51.2 bits (117), Expect = 9e-07
Identities = 37/113 (32%), Positives = 51/113 (45%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 372 RGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTG 530
RGIT+ A + + + +ID P H F + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/113 (30%), Positives = 50/113 (44%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 372 RGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTG 530
RGITI A + + IID P H F + D AVL++ G G
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG 147
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 5e-06
Identities = 34/113 (30%), Positives = 49/113 (43%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 372 RGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTG 530
RGIT+ Y + +ID P H F + + D +L+V A G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 39.5 bits (88), Expect = 0.003
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 320
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 321 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTS 488
+ + L+K E +G T+++ K + + + + +ID+P H F +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 489 QADCAVLIVXAGTG 530
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 39.1 bits (87), Expect = 0.004
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 320
M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 321 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTS 488
+ + L+K E +G T+++ K + + + + +ID+P H F +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 489 QADCAVLIVXAGTG 530
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 174 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 350
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 351 KLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIV 515
+ E+ RGIT+ + + +ID+P H F + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +3
Query: 174 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 350
K HI N+ ++ HVD GK++ L+ I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRM------------AGKLRY---MD 59
Query: 351 KLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIV 515
+ E+ RGIT+ + + +ID+P H F + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 31.1 bits (67), Expect = 0.99
Identities = 27/113 (23%), Positives = 45/113 (39%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184
Query: 372 RGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTG 530
+ + I + Y + IID P H F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 31.1 bits (67), Expect = 0.99
Identities = 27/113 (23%), Positives = 45/113 (39%)
Frame = +3
Query: 192 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
N+ + GH+ GK+T L+ ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59
Query: 372 RGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTG 530
+ + I + Y + IID P H F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 144 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 254
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.99
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 144 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 254
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 270 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 270 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 371
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 189 INIVVIGHVDSGKSTTT 239
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 189 INIVVIGHVDSGKSTTT 239
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,524,335
Number of Sequences: 27780
Number of extensions: 248774
Number of successful extensions: 692
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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