Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F07
(819 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 286 2e-79
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 282 2e-78
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 167 8e-44
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 134 7e-34
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.64
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.4
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 22 7.8
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 286 bits (701), Expect = 2e-79
Identities = 136/144 (94%), Positives = 136/144 (94%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGT 527
DKLKAERERGITIDIALWKFETSKYYVTIIDAP HR FI NMITGTSQADCAVLIV AGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 528 GEFXXGISXNGQTREHALLAFTLG 599
GEF GIS NGQTREHALLAFTLG
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLG 144
Score = 29.5 bits (63), Expect = 0.039
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 598 GVXXLIVXXNXMDSXEPPY 654
GV LIV N MDS EPPY
Sbjct: 144 GVKQLIVGVNKMDSTEPPY 162
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 282 bits (692), Expect = 2e-78
Identities = 134/144 (93%), Positives = 135/144 (93%)
Frame = +3
Query: 168 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 347
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 348 DKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGT 527
DKLKAERERGITIDIALWKFET+KYYVTIIDAP HR FI NMITGTSQADCAVLIV AG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 528 GEFXXGISXNGQTREHALLAFTLG 599
GEF GIS NGQTREHALLAFTLG
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLG 144
Score = 26.2 bits (55), Expect = 0.36
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 598 GVXXLIVXXNXMDSXEPPY 654
GV LIV N MD +PPY
Sbjct: 144 GVKQLIVGVNKMDMTDPPY 162
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 167 bits (407), Expect = 8e-44
Identities = 80/87 (91%), Positives = 80/87 (91%)
Frame = +3
Query: 339 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVX 518
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP HR FI NMITGTSQADCAVLIV
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 519 AGTGEFXXGISXNGQTREHALLAFTLG 599
AGTGEF GIS NGQTREHALLAFTLG
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLG 87
Score = 29.5 bits (63), Expect = 0.039
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 598 GVXXLIVXXNXMDSXEPPY 654
GV LIV N MDS EPPY
Sbjct: 87 GVKQLIVGVNKMDSTEPPY 105
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 134 bits (325), Expect = 7e-34
Identities = 64/71 (90%), Positives = 64/71 (90%)
Frame = +3
Query: 387 DIALWKFETSKYYVTIIDAPXHRXFIXNMITGTSQADCAVLIVXAGTGEFXXGISXNGQT 566
DIALWKFETSKYYVTIIDAP HR FI NMITGTSQADCAVLIV AGTGEF GIS NGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 567 REHALLAFTLG 599
REHALLAFTLG
Sbjct: 61 REHALLAFTLG 71
Score = 29.5 bits (63), Expect = 0.039
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 598 GVXXLIVXXNXMDSXEPPY 654
GV LIV N MDS EPPY
Sbjct: 71 GVKQLIVGVNKMDSTEPPY 89
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 180 KTHINIVVIGHVDSGKST 233
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 189 INIVVIGHVDSGKST 233
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.4
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 181 FSLPIFG*SRITNCV*Y 131
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 1 GYXXXESSRHCWPTGVR 51
GY + +RH PTG R
Sbjct: 58 GYGSNKKTRHMLPTGFR 74
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,293
Number of Sequences: 438
Number of extensions: 2761
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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