Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_F01
(797 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.022
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.050
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.050
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.066
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.15
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.15
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.15
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.20
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.27
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.35
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 26 0.47
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 25 0.81
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 5.7
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 7.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.6
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.022
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
+ RLW+PDV++ N+A G Y V NNG+
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.050
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.1 bits (62), Expect = 0.050
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.066
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAA 359
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.15
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.15
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.15
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.20
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 285 EWGCSTWL-VSSERLWRPDVVLLNAA 359
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.27
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 413
++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.35
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAA 359
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 25.8 bits (54), Expect = 0.47
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 167 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 280
++ L ++H N+ E TV L++ W L+W +
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKS 99
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALR 389
+++W+PD+VL N A G+Y +R
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVR 126
Score = 22.6 bits (46), Expect = 4.3
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGXMG 292
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +1
Query: 568 PTRXSPLRXPSDXAXPSXRAPXXXXXXGXAXXPPLAXPPPXPPXPXP 708
P+ +P PS P +AP + PP PP PP P
Sbjct: 16 PSSGAPGPQPSPHQSP--QAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = +1
Query: 664 PPLAXPPPXPPXPXPXXXPPXGXAPXPARGXXXPXPP 774
P P P P P G P P++G PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA 359
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 649 GXAXXPPLAXPPPXPP 696
G + PP PPP PP
Sbjct: 333 GDSDTPPKPAPPPPPP 348
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 691 PPXPXPXXXPPXGXAPXPAR 750
PP P P PP P A+
Sbjct: 338 PPKPAPPPPPPSSSGPDSAK 357
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 318 ERLWRPDVVLLN 353
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 200 IRESESTVRILADLQMNWIDKRLSWNAG 283
I E + T + + +W+D+RL++ G
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGG 71
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 667 PLAXPPPXPPXPXPXXXPPXGXAPXPARGXXXPXPPP 777
P+ P P PP P P R P P P
Sbjct: 47 PIYIPQPRPPHPRLRREAEPKAEPGNNRPIYIPQPRP 83
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +1
Query: 667 PLAXPPPXPPXPXPXXXPPXGXAPXPARGXXXPXPPP 777
P+ P P PP P P R P P P
Sbjct: 75 PIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRP 111
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNQNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,505
Number of Sequences: 438
Number of extensions: 5197
Number of successful extensions: 58
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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