Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_D09
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 62 6e-10
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 2e-07
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 53 3e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 52 4e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 52 4e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 52 4e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 52 4e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 52 5e-07
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 52 5e-07
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 51 8e-07
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 51 8e-07
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 51 8e-07
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 49 3e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 6e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 6e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 6e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 6e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 6e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 6e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 47 1e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 47 1e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 2e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 46 4e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 45 6e-05
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 45 7e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 44 1e-04
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 43 2e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 42 7e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 40 0.002
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 38 0.008
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 38 0.008
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 37 0.015
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 37 0.015
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 35 0.079
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 35 0.079
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.18
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.73
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 1.3
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 30 2.2
Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical pr... 29 3.9
U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.0
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 28 9.0
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 28 9.0
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/40 (65%), Positives = 31/40 (77%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVAARGLD+P VD+V+ Y P+ + DYVHRVGRT R R
Sbjct: 340 TDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGR 379
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARIRCCGNVSLTERSGFVRYXN 747
T VAARGLD+P V V+ Y P+ +YVHR+GRTGR GNV L + F N
Sbjct: 484 TAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRV------GNVGLA--TSFFNDKN 535
Query: 748 KNV 756
+N+
Sbjct: 536 RNI 538
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRT 681
TDVAARGLDV + V+ Y P ++ DYVHR+GRTGR+
Sbjct: 433 TDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRS 470
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR-TARIRCCGNVSLTERSGFVRY 741
TDVAARGLD+P VD ++QY +Y+HRVGRT R T V E GF+RY
Sbjct: 371 TDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLRY 429
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TD+A+RG+DVP + VL Y P +YVHRVGRTGR R
Sbjct: 395 TDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGR 434
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARIRCCGNVSL 714
T VAARGLD+P V V+ Y P + +YVHR+GRTGR CGN+ +
Sbjct: 455 TAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR------CGNLGI 497
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARIRCCGNVSL 714
T VAARGLD+P V V+ Y P + +YVHR+GRTGR CGN+ +
Sbjct: 439 TAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR------CGNLGI 481
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARIRCCGNVSL 714
T VAARGLD+P V V+ Y P + +YVHR+GRTGR CGN+ +
Sbjct: 436 TAVAARGLDIPNVRHVINYDLPGDSDEYVHRIGRTGR------CGNLGI 478
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVA+RGLD+P VDLV+ + P Y+HRVGR+ R R
Sbjct: 394 TDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGR 433
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVA+RGLD+P VDLV+ + P Y+HRVGR+ R R
Sbjct: 394 TDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARAGR 433
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
T VAARGLDV + LV+ Y P DYVHRVGRTGR R
Sbjct: 609 TSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGR 648
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 559 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
L TDV ARGLDVP+V LV+ Y P + Y+HR+GR+GR R
Sbjct: 319 LISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGR 361
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 559 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
L TDV ARGLDVP+V LV+ Y P + Y+HR+GR+GR R
Sbjct: 319 LISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGR 361
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TD+ ARG+DV +V LV+ Y P++ +Y+HR+GR+GR R
Sbjct: 325 TDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR 364
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TD+ ARG+DV +V LV+ Y P++ +Y+HR+GR+GR R
Sbjct: 38 TDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR 77
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 51.2 bits (117), Expect = 8e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TD+ ARG+DV +V LV+ Y P++ +Y+HR+GR+GR R
Sbjct: 325 TDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGR 364
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVA RG+DV V LVL Y S DY HR+GRTGR +
Sbjct: 630 TDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGK 669
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
TDVA+RGLD +D V+Q PA DY+HRVGR+ R
Sbjct: 379 TDVASRGLDFEHIDWVIQVDCPAQIDDYIHRVGRSAR 415
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T VA RGLD+ VD V+ Y P + DY+HR+GRTGR
Sbjct: 663 TAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 699
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T VA RGLD+ VD V+ Y P + DY+HR+GRTGR
Sbjct: 874 TAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 910
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T VA RGLD+ VD V+ Y P + DY+HR+GRTGR
Sbjct: 874 TAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 910
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T VA RGLD+ VD V+ Y P + DY+HR+GRTGR
Sbjct: 663 TAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 699
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T VA RGLD+ VD V+ Y P + DY+HR+GRTGR
Sbjct: 663 TAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 699
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T VA RGLD+ VD V+ Y P + DY+HR+GRTGR
Sbjct: 874 TAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGR 910
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
T++ RGLD+ V LV+ Y P S Y+HRVGRTGR +
Sbjct: 432 TELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGK 471
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARI-RCCGNVSLTE 720
T V RGLD+ VD V+ Y P + DY+HR+GRTGR R +SL +
Sbjct: 620 TAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARI-RCCGNVSLTE 720
T V RGLD+ VD V+ Y P + DY+HR+GRTGR R +SL +
Sbjct: 620 TAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLAD 671
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVA++GLD ++ V+ + P +YVHR+GRTGR+ R
Sbjct: 498 TDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGR 537
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTA 684
TDVAARGLD+ +D V+ Y P Y+HR GRT R +
Sbjct: 330 TDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARAS 368
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTA 684
TDVAARGLD+ +D V+ Y P Y+HR GRT R +
Sbjct: 497 TDVAARGLDIQGIDHVIHYQVPKKVEIYIHRSGRTARAS 535
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVAARG+D+P +D V+ P A +VHRVGR R R
Sbjct: 322 TDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGR 361
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDVAARG+D+P +D V+ P A +VHRVGR R R
Sbjct: 322 TDVAARGVDIPLLDTVINLHFPPKAKLFVHRVGRVARAGR 361
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 559 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARI-RCCGNVSLTERSGFV 735
L TD+A+RGLD+ V V+ P S Y+HRVGRT R + R V ER
Sbjct: 471 LVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISLVGEDERKLLK 530
Query: 736 RYXNKN 753
N N
Sbjct: 531 EIVNSN 536
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
TDV ARG+D+ +D V+Q+ P ++ +VHR GRT R R
Sbjct: 316 TDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGR 355
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTAR 687
+DV ARG D+ +VD V+ Y PA +VHR GRTGR +
Sbjct: 456 SDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQ 495
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARI 690
+DV ARGLDV V V+ P + YVHR+GR GR R+
Sbjct: 562 SDVVARGLDVQGVPFVISVTLPDEKSMYVHRIGRVGRAERM 602
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
TD+ RG+D+ RV++V Y P + Y+HRV R GR
Sbjct: 340 TDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGR 376
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
TD+ RG+D+ RV++V Y P + Y+HRV R GR
Sbjct: 332 TDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGR 368
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
TDVAARGLD+ + V+ + +VHR+GRTGR
Sbjct: 567 TDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGR 603
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
+D+ RG+D+ V++V+ + P +A Y+HR+GR+GR
Sbjct: 337 SDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGR 373
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = +1
Query: 541 DLSGTRLN---KTDVAARGLDVPRVDLVLQYCAPASATD-----YVHRVGRTGRTAR 687
D R+N TD+ +RG+DV +D V+ + P D ++HR GRTGRT R
Sbjct: 691 DFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGR 747
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 559 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
L +D+ ARG+D V+LV+ A A+ Y HR+GR R
Sbjct: 313 LVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAAR 352
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 559 LNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
L +D+ ARG+D V+LV+ A A+ Y HR+GR R
Sbjct: 313 LVSSDLTARGIDADNVNLVVNIDAAANEETYFHRIGRAAR 352
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 553 TRLNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
++L+K +RG+D V V+ + P + Y+HRVGRT R
Sbjct: 360 SKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTAR 401
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 553 TRLNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
++L+K +RG+D V V+ + P + Y+HRVGRT R
Sbjct: 427 SKLDKESGVSRGIDFHHVSNVVNFDFPETTDAYIHRVGRTAR 468
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 34.7 bits (76), Expect = 0.079
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASA--TDYVHRVGRTGR 678
++V ARGL++ +D V+ Y P +YV+R+GRTGR
Sbjct: 1059 SNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGR 1097
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 34.7 bits (76), Expect = 0.079
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASA--TDYVHRVGRTGR 678
++V ARGL++ +D V+ Y P +YV+R+GRTGR
Sbjct: 1059 SNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGR 1097
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 17/70 (24%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATD-----------------YVHRVGRTGRTARIRC 696
T+V ARG+DV +V +V+ Y P TD Y+HR+GRTGR +
Sbjct: 512 TNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGI 571
Query: 697 CGNVSLTERS 726
N+ +E S
Sbjct: 572 AINLIDSEDS 581
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 17/70 (24%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATD-----------------YVHRVGRTGRTARIRC 696
T+V ARG+DV +V +V+ Y P TD Y+HR+GRTGR +
Sbjct: 537 TNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGI 596
Query: 697 CGNVSLTERS 726
N+ +E S
Sbjct: 597 AINLIDSEDS 606
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 33.5 bits (73), Expect = 0.18
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 17/70 (24%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATD-----------------YVHRVGRTGRTARIRC 696
T+V ARG+DV +V +V+ Y P TD Y+HR+GRTGR +
Sbjct: 921 TNVFARGIDVAQVSVVINYDLPIKYTDEGTPMVVDGFTQPDCETYLHRIGRTGRFGKTGI 980
Query: 697 CGNVSLTERS 726
N+ +E S
Sbjct: 981 AINLIDSEDS 990
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.73
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T++ ARG+DV V + A Y HR+GR GR
Sbjct: 433 TNILARGIDVSSVKHTIIMEMSADFDTYKHRIGRVGR 469
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 568 TDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGR 678
T++ +RG+DV V + Y+HR+GR GR
Sbjct: 431 TNIMSRGIDVSSVKQTIIMEMSTDFPSYMHRIGRVGR 467
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +1
Query: 553 TRLNKTDVAARGLDVPRVDLVLQYCAPASATDYVHRVGRTGRTARIRCC 699
T + T G+D P V V+ Y P + Y +GR GR C
Sbjct: 498 TTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSIC 546
>Z79756-9|CAK12562.1| 830|Caenorhabditis elegans Hypothetical
protein F53C11.5c protein.
Length = 830
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 607 PLEARPSHGPPHPSCLTVFPRGPQLASHT*RIHLSIRPNPPRCSS 473
P+ PS PPHP+ +P G SH I P PP S+
Sbjct: 24 PMYPYPSAPPPHPNAPMYYPYGHHAPSHAPMPSQKILP-PPTTSA 67
>Z79756-8|CAB02122.1| 891|Caenorhabditis elegans Hypothetical
protein F53C11.5b protein.
Length = 891
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 607 PLEARPSHGPPHPSCLTVFPRGPQLASHT*RIHLSIRPNPPRCSS 473
P+ PS PPHP+ +P G SH I P PP S+
Sbjct: 85 PMYPYPSAPPPHPNAPMYYPYGHHAPSHAPMPSQKILP-PPTTSA 128
>Z79756-7|CAK12561.1| 855|Caenorhabditis elegans Hypothetical
protein F53C11.5a protein.
Length = 855
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 607 PLEARPSHGPPHPSCLTVFPRGPQLASHT*RIHLSIRPNPPRCSS 473
P+ PS PPHP+ +P G SH I P PP S+
Sbjct: 49 PMYPYPSAPPPHPNAPMYYPYGHHAPSHAPMPSQKILP-PPTTSA 92
>U53148-2|AAB37078.1| 360|Caenorhabditis elegans Hypothetical
protein C26F1.6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 475 SGWLWKCLAVGLYLAVLGRAMTNSHCTPQREL 380
S WL + + YLAV M N++CT R L
Sbjct: 95 SVWLLVSITIDRYLAVCHPFMVNTYCTRNRAL 126
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 638 DAGAQYCKTRSTRGTSKPRAATSVLFNRVPERSTAGQPHVEDPSK 504
+A C+T + R T+ P AAT +F P+ S G + PS+
Sbjct: 129 NASTGMCQTINARETA-PAAATETMFVDNPKESVMGYKSIATPSE 172
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 638 DAGAQYCKTRSTRGTSKPRAATSVLFNRVPERSTAGQPHVEDPSK 504
+A C+T + R T+ P AAT +F P+ S G + PS+
Sbjct: 159 NASTGMCQTINARETA-PAAATETMFVDNPKESVMGYKSIATPSE 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,848,648
Number of Sequences: 27780
Number of extensions: 464933
Number of successful extensions: 1396
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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