Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_D07
         (798 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0373 + 2783596-2784933                                           31   0.80 
06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422     29   3.2  
05_05_0175 + 22966151-22967614                                         29   3.2  
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196...    28   9.9  
08_01_0150 - 1179147-1179899,1180025-1180579                           28   9.9  

>07_01_0373 + 2783596-2784933
          Length = 445

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 12/28 (42%), Positives = 21/28 (75%)
 Frame = -1

Query: 336 EEEKALTKEGMAEAAETXKGTISSMNRS 253
           E+++ LTK G +  +ET KG++ S++RS
Sbjct: 151 EQQQQLTKSGCSSTSETSKGSVLSLSRS 178


>06_03_0372 - 20013078-20013533,20013969-20014062,20014247-20014422
          Length = 241

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -2

Query: 386 VAYPWNAQTGYQFEGVWKKRKH*PRREWPKRQKRXKAQFLP*IGHQKSSCKTPS 225
           +A P+  QTG + E   K+ K+ P++   +R K     +L   GH +   + PS
Sbjct: 105 IATPYRPQTGGKVETYNKQIKNIPQKAVNERGKHGSISYLMLFGHVEPHTRRPS 158


>05_05_0175 + 22966151-22967614
          Length = 487

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = -3

Query: 265 HE*VIRNPVVKHPLQKDRKRGGRNECELIN--VGGRSYPEEHKGGVITRRNRGKALSDKE 92
           HE V   P  +  L   R  GG    E++   VGG  Y  E +GG   ++ R + +SD  
Sbjct: 5   HERVAPPPAAE--LAGRRGGGGGEGMEIVTARVGGCGYGYEEEGGTRRQQRRRRKVSDGH 62

Query: 91  VRALLL 74
           V A LL
Sbjct: 63  VVAQLL 68


>09_02_0602 -
           11118788-11119178,11119262-11119451,11119590-11119658,
           11119890-11120016,11120134-11120399,11120760-11120872,
           11121693-11121764,11121860-11121998,11124277-11124360,
           11125278-11125771,11127604-11128187
          Length = 842

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 239 NWISDDLFMEEIVPLXVSAASAIPSLVNAFSSSKPPQTDNPSARSMD 379
           +WIS +   +  + L  + +S +P +VNAF        DNPS    D
Sbjct: 313 DWISAETSGKYNITLAATDSSQLPPIVNAFEVYGRIPLDNPSTFPTD 359


>08_01_0150 - 1179147-1179899,1180025-1180579
          Length = 435

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 551 TVQSLPNVSSIIKGYRXXXSGXS*GXSFAFP 643
           +V+ +P++ S +KGY    +  S G S +FP
Sbjct: 322 SVREVPSIQSALKGYNGLIASKSFGFSSSFP 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,152,196
Number of Sequences: 37544
Number of extensions: 371357
Number of successful extensions: 709
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)