Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_D05
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF623993-1|ABR25253.1| 1052|Homo sapiens ubiquitin-activating en... 33 0.95
BC126486-1|AAI26487.1| 1052|Homo sapiens ubiquitin-activating en... 33 0.95
BC126484-1|AAI26485.1| 1052|Homo sapiens ubiquitin-activating en... 33 0.95
AY359880-1|AAQ63403.1| 578|Homo sapiens hypothetical protein FL... 33 0.95
AL832458-1|CAD89959.1| 1052|Homo sapiens hypothetical protein pr... 33 0.95
AL832015-1|CAD89908.1| 1052|Homo sapiens hypothetical protein pr... 33 0.95
AK001670-1|BAA91824.1| 459|Homo sapiens protein ( Homo sapiens ... 33 0.95
AC096720-2|AAY40999.1| 787|Homo sapiens unknown protein. 33 0.95
AB014773-1|BAB19785.1| 1052|Homo sapiens MOP-4 protein. 33 0.95
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.8
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.8
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.8
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
>EF623993-1|ABR25253.1| 1052|Homo sapiens ubiquitin-activating
enzyme 6 protein.
Length = 1052
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 669 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 727
>BC126486-1|AAI26487.1| 1052|Homo sapiens ubiquitin-activating
enzyme E1-like 2 protein.
Length = 1052
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 669 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 727
>BC126484-1|AAI26485.1| 1052|Homo sapiens ubiquitin-activating
enzyme E1-like 2 protein.
Length = 1052
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 669 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 727
>AY359880-1|AAQ63403.1| 578|Homo sapiens hypothetical protein
FLJ10808 isoform protein.
Length = 578
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 195 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 253
>AL832458-1|CAD89959.1| 1052|Homo sapiens hypothetical protein
protein.
Length = 1052
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 669 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 727
>AL832015-1|CAD89908.1| 1052|Homo sapiens hypothetical protein
protein.
Length = 1052
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 669 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 727
>AK001670-1|BAA91824.1| 459|Homo sapiens protein ( Homo sapiens
cDNA FLJ10808 fis, clone NT2RP4000879, weakly similar to
UBIQUITIN-ACTIVATING ENZYME E1. ).
Length = 459
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 76 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 134
>AC096720-2|AAY40999.1| 787|Homo sapiens unknown protein.
Length = 787
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 404 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 462
>AB014773-1|BAB19785.1| 1052|Homo sapiens MOP-4 protein.
Length = 1052
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +1
Query: 646 VLKXVRAGG*ASGCHQXLHQRISXPRHWAWLXGVRPLIFK*MMNHKLRALLXVIPRILR 822
VL+ +++G GC Q + PR+W+ + L F+ NHK LL P +R
Sbjct: 669 VLQKIQSGHSLEGCFQVIKLLSRRPRNWSQCVELARLKFEKYFNHKALQLLHCFPLDIR 727
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,749,977
Number of Sequences: 237096
Number of extensions: 2344608
Number of successful extensions: 5179
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5179
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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