Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_D03
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 37 0.018
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 36 0.023
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.023
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.023
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 36 0.023
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 36 0.023
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 35 0.071
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.22
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.50
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 32 0.50
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 32 0.50
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 32 0.50
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.50
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.50
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 31 0.66
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 1.2
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 30 2.0
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 29 4.7
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 28 8.2
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 89 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRI 265
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 266 LADLQMNWIDKRLGWNAGGM-GLQH 337
L + W D L W G++H
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKH 139
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLGWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 GMG 328
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLGWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 GMG 328
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLGWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 GMG 328
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLGWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 GMG 328
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLGWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 GMG 328
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.023
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 143 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLGWNAG 319
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 320 GMG 328
G
Sbjct: 130 LFG 132
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 167 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLGWNA 316
YD E+P + L +L+ ++E + + ++ ++ W D RL WNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +2
Query: 146 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 304
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 305 GWNA 316
WNA
Sbjct: 110 SWNA 113
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +2
Query: 143 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLG 307
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 308 W 310
W
Sbjct: 85 W 85
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 209 LTLHLRHANIRESESTVRILADLQMNWIDKRLGWNA 316
L +L+ ++E E V ++ +L W D RL WN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +2
Query: 143 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLG 307
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++L
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 308 W---NAGGMGLQHL 340
W N GG+ + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +2
Query: 143 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLG 307
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++L
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 308 W---NAGGMGLQHL 340
W N GG+ + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +2
Query: 143 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLG 307
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++L
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 308 W---NAGGMGLQHL 340
W N GG+ + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLGWN 313
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 200 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLGWN 313
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 182 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLGWNAGGM-GLQHL 340
PP +I + L++ ++ + E E L D + +W D RL W+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 182 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLGWN 313
PP +++ + + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/79 (18%), Positives = 31/79 (39%)
Frame = +2
Query: 104 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 283
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 284 NWIDKRLGWNAGGMGLQHL 340
+W D + W+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 209 LTLHLRHANIRESESTVRILADLQMNWIDKRLGWN 313
L +L+ ++E V ++ +L W D RL WN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 167 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLGWNA 316
YD ++P + L L+ + E V ++ ++ W D RL WNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +2
Query: 233 NIRESESTVRILADLQMNWIDKRLGWNA---GGMGLQHLAG 346
++ E + + + L +W+D RL WN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 119 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 292
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 293 DKRLGWN 313
D RL WN
Sbjct: 93 DDRLMWN 99
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 236 IRESESTVRILADLQMNWIDKRLGWNAGG--MGLQHLAGVLGNACW 367
++ S + D+ +NW D+R+ W+ G +HL +A W
Sbjct: 83 VKGSSYQFNVFGDIYLNWKDERMKWDKKGEFENYEHLYIFNSSAIW 128
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 27.9 bits (59), Expect = 8.2
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 215 LHLRHAN-IRESESTVRILADLQMNWIDKRLGWN 313
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,457,687
Number of Sequences: 27780
Number of extensions: 267335
Number of successful extensions: 903
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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