Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_D02
(834 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 35 0.069
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 2.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 2.0
07_03_1433 + 26513728-26514135,26525534-26526280 30 2.0
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 2.6
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.6
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.5
06_01_0586 - 4203024-4203425,4203527-4203595,4203681-4203746,420... 29 4.6
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 29 6.0
09_02_0082 - 4060018-4061604 29 6.0
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 29 6.0
07_01_0479 + 3606663-3607448 29 6.0
03_02_0350 - 7734494-7734952,7735765-7736133 29 6.0
12_02_0848 + 23636478-23638058 28 8.0
12_02_0647 + 21487932-21488011,21488454-21488472,21488842-21489507 28 8.0
08_01_0507 - 4415086-4415724,4416094-4416112,4416555-4416634 28 8.0
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.0
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 8.0
07_01_0080 + 587674-588510 28 8.0
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 8.0
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 35.1 bits (77), Expect = 0.069
Identities = 25/85 (29%), Positives = 25/85 (29%)
Frame = +1
Query: 388 GGGAXXPPXAXGXGGXQXXAXXGGRPPGGXXSXSXPXGXXXXXXXAXPWGGXXKXXAAPX 567
GGG P G GG GG GG G P GG P
Sbjct: 114 GGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPP 173
Query: 568 GXGXXXXXGXXGXXPSXXGGGXXXG 642
G G G G P GGG G
Sbjct: 174 GGG--GGGGGPGRAPGGGGGGGGPG 196
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 357 PXGGXXXXKTGGGGQXPXXGXGXGGXPKXXXXRG 458
P GG GGGG P G G GG P G
Sbjct: 92 PGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAG 125
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 640 PPXXPPRXPXXXPPXXRPGGXXP 572
PP PP P PP +PGG P
Sbjct: 616 PPPRPPGAPPPPPPPGKPGGPPP 638
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 640 PPXXPPRXPXXXPPXXRPGGXXP 572
PP PP P PP +PGG P
Sbjct: 921 PPPRPPGAPPPPPPPGKPGGPPP 943
>07_03_1433 + 26513728-26514135,26525534-26526280
Length = 384
Score = 30.3 bits (65), Expect = 2.0
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 682 PXXPXXAXPPXNTXPNPAXXXPXPP 756
P P PP T PNPA P PP
Sbjct: 63 PSPPTTYPPPSTTPPNPAPTSPSPP 87
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 682 PXXPXXAXPPXNTXPNPAXXXPXPPXXAXP 771
P P PP +T P+PA P PP P
Sbjct: 42 PSMPPTYPPPSSTPPSPAPVSPSPPTTYPP 71
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 661 RLXEXRXPXXPXXAXPPXNTXPNPAXXXPXPPXXAXP 771
R+ P P PP + P PA P PP A P
Sbjct: 87 RIPPPPPPLLPTPPPPPASISPTPAPPLPPPPAPAPP 123
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = -3
Query: 472 PXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAA 296
P GP PP P P G PPPP PP G+ P + P AA
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPP-----PPPGGKKGGPPPPPPKGGASRPPAA 392
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
PP P P PPPP PP P + P P P
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 225 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 136
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>06_01_0586 -
4203024-4203425,4203527-4203595,4203681-4203746,
4204006-4204071,4204642-4204719,4204811-4205233
Length = 367
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 282 RANGAAALGPGXSXRXTPXXGXXXSPXGGXXXXKTGGGGQXPXXGXGXGG 431
R GAA + P + + S GG K G GG+ G G GG
Sbjct: 217 RLGGAAGMAPLVASMSSEGNSNGSSNGGGGKASKGGTGGEGGGGGGGGGG 266
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +1
Query: 385 PGGGAXXPPXAXGXGGXQXXAXXGGRPPGGXXSXSXPXG 501
PGGG P G GG + G R G S S P G
Sbjct: 245 PGGGRASGPRDGGSGGSRPADARGKRKQEGFSSPSPPRG 283
>09_02_0082 - 4060018-4061604
Length = 528
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 691 PXXAXPPXNTXPNPAXXXPXPPXXAXP 771
P PP T P PA P PP A P
Sbjct: 337 PPAPAPPVATPPTPATPVPTPPMTAPP 363
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +3
Query: 588 GRXLGGXXXGXRGGXXGGAXLXXRXAXGXAXXPXPAARLAXXEHPPQPGXXXP 746
GR GG G RGG G A A P P A A PP P P
Sbjct: 79 GRGDGGRGRG-RGGGGGDGVRPAMAAAPAASTPGPVAVAARSTPPPTPAVQIP 130
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.7 bits (61), Expect = 6.0
Identities = 26/85 (30%), Positives = 28/85 (32%)
Frame = -3
Query: 640 PPXXPPRXPXXXPPXXRPGGXXPXXXGXXXXXXXHPKGXXXXXXXXXLXVSMXXXXPXGG 461
PP PP+ P P RP G P G P G + P G
Sbjct: 176 PPMRPPQMPI---PFQRPPGVPPAFPGGPPP----PPGPFMRGPPPMGPPQVRPGMP--G 226
Query: 460 GPRXXXXFGXPPXPXPXXGXWPPPP 386
GP G PP P G PPPP
Sbjct: 227 GPPPGMRPGMPPPPF-RPGMPPPPP 250
>03_02_0350 - 7734494-7734952,7735765-7736133
Length = 275
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 363 GGXXXXKTGGGGQXPXXGXGXGGXP 437
GG +GGGG P G G GG P
Sbjct: 13 GGGGGGGSGGGGGGPSGGGGGGGGP 37
>12_02_0848 + 23636478-23638058
Length = 526
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/85 (27%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Frame = -3
Query: 421 PXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFALRSNSVVCRSNS-- 248
P G PPPP PP P R A + + + R NS
Sbjct: 56 PVQRAGDTPPPPPIIDASPPPPSTSPPPPPPRRGRPARRDRCAGRYVYMHELPSRFNSDL 115
Query: 247 FEDLPVSARWTRTHEC*HVSNAGSG 173
D + W T C HV+N G G
Sbjct: 116 LRDCRTLSEW--TDMCRHVANGGIG 138
>12_02_0647 + 21487932-21488011,21488454-21488472,21488842-21489507
Length = 254
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +3
Query: 285 ANGAAALGPGXSXRXTPXXGXXXSPXGGXXXXKTGGGGQXPXXGXGXGGXPK 440
ANG LG + R G P G + GGGG G G GG K
Sbjct: 76 ANGLRGLGSADAVRHRHRGGWIRPPAEG-RTSRGGGGGGWRRDGCGGGGGVK 126
>08_01_0507 - 4415086-4415724,4416094-4416112,4416555-4416634
Length = 245
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +3
Query: 285 ANGAAALGPGXSXRXTPXXGXXXSPXGGXXXXKTGGGGQXPXXGXGXGGXPK 440
ANG LG + R G P G + GGGG G G GG K
Sbjct: 76 ANGLRGLGSADAVRHRHRGGWIRPPAEG-RTSRGGGGGGWRRDGCGGGGGVK 126
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/70 (27%), Positives = 20/70 (28%)
Frame = -2
Query: 629 PPPXXXGXXPXXPXXXXXPXPXGAAXXXSLPPQGXAXXXXXXXPXGXDXEXXPPGGRPPX 450
PPP P P P P PPQ P G + PP PP
Sbjct: 56 PPPPPGPPPPHQPQFNFGPGPPQQQQPPP-PPQMYYQPPPPPPPYGVNSSQPPPPPPPPP 114
Query: 449 XAXLWXPPXP 420
PP P
Sbjct: 115 SPPPSAPPPP 124
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 97 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 252
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>07_01_0080 + 587674-588510
Length = 278
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPP 362
PP P P G PPPP PP
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPP 116
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 285 ANGAAALGPGXSXRXTPXXGXXXSPXGGXXXXKTGGGGQXPXXGXGXGGXPKXXXXRG 458
A G G G G P GG GGGG G G GG + RG
Sbjct: 35 AGGGGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGRGYGGGGGGGGYESGGGRG 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.136 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,039,704
Number of Sequences: 37544
Number of extensions: 476567
Number of successful extensions: 1706
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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