Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_D02
(834 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 38 0.034
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 38 0.034
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 38 0.034
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 37 0.078
AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein. 36 0.24
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 35 0.32
AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant pr... 32 2.2
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 2.9
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 32 2.9
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 2.9
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 32 2.9
BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein. 31 3.9
BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein. 31 3.9
BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled ... 31 3.9
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 31 3.9
AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein. 31 3.9
AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein. 31 5.1
AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein. 31 5.1
AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein. 31 5.1
AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein. 31 5.1
AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein. 31 5.1
AB037732-1|BAA92549.1| 889|Homo sapiens KIAA1311 protein protein. 31 5.1
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 30 9.0
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 30 9.0
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 30 9.0
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 30 9.0
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 30 9.0
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 30 9.0
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 30 9.0
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 30 9.0
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 30 9.0
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 30 9.0
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 30 9.0
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 30 9.0
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 30 9.0
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 30 9.0
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 30 9.0
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 30 9.0
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 38.3 bits (85), Expect = 0.034
Identities = 34/134 (25%), Positives = 36/134 (26%)
Frame = -3
Query: 691 GXGXXAXPXAXRXXSXAPPXXPPRXPXXXPPXXRPGGXXPXXXGXXXXXXXHPKGXXXXX 512
G G P PP PP P P PG P P
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFP 280
Query: 511 XXXXLXVSMXXXXPXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
+ P G P +G PP P P PPPP PP G P
Sbjct: 281 GQPFGQPPLGPLPP--GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP-GPLGPPLTL 337
Query: 331 VXRXXHPGPSAAAP 290
PGP AP
Sbjct: 338 APPPHLPGPPPGAP 351
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 38.3 bits (85), Expect = 0.034
Identities = 34/134 (25%), Positives = 36/134 (26%)
Frame = -3
Query: 691 GXGXXAXPXAXRXXSXAPPXXPPRXPXXXPPXXRPGGXXPXXXGXXXXXXXHPKGXXXXX 512
G G P PP PP P P PG P P
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFP 280
Query: 511 XXXXLXVSMXXXXPXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
+ P G P +G PP P P PPPP PP G P
Sbjct: 281 GQPFGQPPLGPLPP--GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP-GPLGPPLTL 337
Query: 331 VXRXXHPGPSAAAP 290
PGP AP
Sbjct: 338 APPPHLPGPPPGAP 351
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 38.3 bits (85), Expect = 0.034
Identities = 34/134 (25%), Positives = 36/134 (26%)
Frame = -3
Query: 691 GXGXXAXPXAXRXXSXAPPXXPPRXPXXXPPXXRPGGXXPXXXGXXXXXXXHPKGXXXXX 512
G G P PP PP P P PG P P
Sbjct: 222 GPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPP-PGQVLPPPLAGPPNRGDRPPPPVLFP 280
Query: 511 XXXXLXVSMXXXXPXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
+ P G P +G PP P P PPPP PP G P
Sbjct: 281 GQPFGQPPLGPLPP--GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP-GPLGPPLTL 337
Query: 331 VXRXXHPGPSAAAP 290
PGP AP
Sbjct: 338 APPPHLPGPPPGAP 351
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 37.1 bits (82), Expect = 0.078
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 4/117 (3%)
Frame = -3
Query: 628 PPRXPXXXPPXXRPGGXXPXXXGXXXXXXXHPKGXXXXXXXXXLXVSMXXXXPXG----G 461
PPR P P P G P P P G G
Sbjct: 273 PPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPG 332
Query: 460 GPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
P +G PP P P PPPP PP G P PGP AP
Sbjct: 333 PPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP-GPLGPPLTLAPPPHLPGPPPGAP 388
>AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.
Length = 1584
Score = 35.5 bits (78), Expect = 0.24
Identities = 26/79 (32%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = -3
Query: 472 PXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG--VXRXXHPGPSA 299
P GGP PP P P PPPP PP E P G HPGPS
Sbjct: 1398 PPSGGPPEAPPAQPPPPPPPP----PPPPQQPLPPPPNLEPAPPSLGDPGEPAAHPGPS- 1452
Query: 298 AAPFALRSNSVVCRSNSFE 242
P N +S E
Sbjct: 1453 TGPSTKNENVATLSVSSLE 1471
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 35.1 bits (77), Expect = 0.32
Identities = 20/58 (34%), Positives = 21/58 (36%)
Frame = -3
Query: 463 GGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
G P +G PP P P PPPP PP G P PGP AP
Sbjct: 222 GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP-GPLGPPLTLAPPPHLPGPPPGAP 278
>AB209373-1|BAD92610.1| 410|Homo sapiens CS0DA006YC23 variant
protein.
Length = 410
Score = 32.3 bits (70), Expect = 2.2
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 457 PRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
P F P P P G PPPP PP P V HP P P
Sbjct: 318 PPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTHAV--PPHPPPGLGLP 371
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFA 284
PP P P G PPPP PP P R P P + AP A
Sbjct: 277 PPPPPPSRGGPPPPP-----PPPHSSGPPPPPARGRGAPPPPPSRAPTA 320
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFA 284
PP P P G PPPP PP P R P P + AP A
Sbjct: 277 PPPPPPSRGGPPPPP-----PPPHNSGPPPPPARGRGAPPPPPSRAPTA 320
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFA 284
PP P P G PPPP PP P R P P + AP A
Sbjct: 277 PPPPPPSRGGPPPPP-----PPPHNSGPPPPPARGRGAPPPPPSRAPTA 320
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFA 284
PP P P G PPPP PP P R P P + AP A
Sbjct: 277 PPPPPPSRGGPPPPP-----PPPHNSGPPPPPARGRGAPPPPPSRAPTA 320
>BC064999-1|AAH64999.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.5 bits (68), Expect = 3.9
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFALRSNSVVCRSN 251
PP P P G PPPP PP G P P P A AL+ S+ +N
Sbjct: 553 PPPPLPG-GMLPPPP---PPLPPGGPPPPPGPPPLGAIMPPPGAPMGLALKKKSIPQPTN 608
Query: 250 SFEDLPVSARWTRTHE 203
+ + S W++ E
Sbjct: 609 ALK----SFNWSKLPE 620
>BC038428-1|AAH38428.1| 1068|Homo sapiens DAAM1 protein protein.
Length = 1068
Score = 31.5 bits (68), Expect = 3.9
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFALRSNSVVCRSN 251
PP P P G PPPP PP G P P P A AL+ S+ +N
Sbjct: 553 PPPPLPG-GMLPPPP---PPLPPGGPPPPPGPPPLGAIMPPPGAPMGLALKKKSIPQPTN 608
Query: 250 SFEDLPVSARWTRTHE 203
+ + S W++ E
Sbjct: 609 ALK----SFNWSKLPE 620
>BC024781-1|AAH24781.1| 662|Homo sapiens Similar to dishevelled
associated activator of morphogenesis 2 protein.
Length = 662
Score = 31.5 bits (68), Expect = 3.9
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFALRSNSVVCRSN 251
PP P P G PPPP PP G P P P A AL+ S+ +N
Sbjct: 147 PPPPLPG-GMLPPPP---PPLPPGGPPPPPGPPPLGAIMPPPGAPMGLALKKKSIPQPTN 202
Query: 250 SFEDLPVSARWTRTHE 203
+ + S W++ E
Sbjct: 203 ALK----SFNWSKLPE 214
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 31.5 bits (68), Expect = 3.9
Identities = 21/72 (29%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Frame = +3
Query: 219 HRA-DTGRSSNELDRQTTELERRANGAAALGPGXSXRXTPXXGXXXSPXGGXXXXKTGGG 395
H+A + G + + + L A GA A G P G GG GGG
Sbjct: 108 HQALEPGDLLDHISSPSLALMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGG 167
Query: 396 GQXPXXGXGXGG 431
G P G G G
Sbjct: 168 GGGPGGGGGGPG 179
>AB014566-1|BAA31641.1| 1085|Homo sapiens KIAA0666 protein protein.
Length = 1085
Score = 31.5 bits (68), Expect = 3.9
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAPFALRSNSVVCRSN 251
PP P P G PPPP PP G P P P A AL+ S+ +N
Sbjct: 560 PPPPLPG-GMLPPPP---PPLPPGGPPPPPGPPPLGAIMPPPGAPMGLALKKKSIPQPTN 615
Query: 250 SFEDLPVSARWTRTHE 203
+ + S W++ E
Sbjct: 616 ALK----SFNWSKLPE 627
>AL646016-1|CAI17009.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
PP P P G PPPP+ PP P G
Sbjct: 1340 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG 1372
Score = 30.3 bits (65), Expect = 9.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
PP P P G PPPP+ PP P G+ P P P
Sbjct: 1329 PPPPLPGVGIPPPPPLPGAGIPP----PPPLPGMGIPPAPAPPLPPP 1371
>AL590490-1|CAH70931.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
PP P P G PPPP+ PP P G
Sbjct: 1340 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG 1372
Score = 30.3 bits (65), Expect = 9.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
PP P P G PPPP+ PP P G+ P P P
Sbjct: 1329 PPPPLPGVGIPPPPPLPGAGIPP----PPPLPGMGIPPAPAPPLPPP 1371
>AL513342-1|CAI17121.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
PP P P G PPPP+ PP P G
Sbjct: 1340 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG 1372
Score = 30.3 bits (65), Expect = 9.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
PP P P G PPPP+ PP P G+ P P P
Sbjct: 1329 PPPPLPGVGIPPPPPLPGAGIPP----PPPLPGMGIPPAPAPPLPPP 1371
>AL359918-1|CAI15795.1| 1865|Homo sapiens formin 2 protein.
Length = 1865
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
PP P P G PPPP+ PP P G
Sbjct: 1340 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG 1372
Score = 30.3 bits (65), Expect = 9.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
PP P P G PPPP+ PP P G+ P P P
Sbjct: 1329 PPPPLPGVGIPPPPPLPGAGIPP----PPPLPGMGIPPAPAPPLPPP 1371
>AB209153-1|BAD92390.1| 1332|Homo sapiens formin 2 variant protein.
Length = 1332
Score = 31.1 bits (67), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXG 332
PP P P G PPPP+ PP P G
Sbjct: 807 PPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPG 839
Score = 30.3 bits (65), Expect = 9.0
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = -3
Query: 430 PPXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGPSAAAP 290
PP P P G PPPP+ PP P G+ P P P
Sbjct: 796 PPPPLPGVGIPPPPPLPGAGIPP----PPPLPGMGIPPAPAPPLPPP 838
>AB037732-1|BAA92549.1| 889|Homo sapiens KIAA1311 protein protein.
Length = 889
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 427 PXPXPXXGXWPPPPVXXXXXPPXGEXXXPXXGVXRXXHPGP 305
P P P G PPPP P G P G PGP
Sbjct: 144 PFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGP 184
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 30.3 bits (65), Expect = 9.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 133 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 294
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 30.3 bits (65), Expect = 9.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 133 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 294
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 30.3 bits (65), Expect = 9.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 133 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 294
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = -3
Query: 472 PXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPP----XGEXXXPXXGVXRXXHPGP 305
P G P F PP P P PPPP+ PP G P P P
Sbjct: 305 PLGSPPGPKPGFAPPPAPPP-----PPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHP 359
Query: 304 SAAAP 290
AAP
Sbjct: 360 DFAAP 364
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = -3
Query: 472 PXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPP----XGEXXXPXXGVXRXXHPGP 305
P G P F PP P P PPPP+ PP G P P P
Sbjct: 305 PLGSPPGPKPGFAPPPAPPP-----PPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHP 359
Query: 304 SAAAP 290
AAP
Sbjct: 360 DFAAP 364
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Frame = +1
Query: 61 AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 219
A+ C A + ++D LL Y+ P S ++++ L L A ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 220 TVRILADLQMNWIDKRLSWNAGR 288
+ L+ W D RL+WN+ R
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSR 96
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 30.3 bits (65), Expect = 9.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 133 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 294
Y++E P + + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 38 YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 30.3 bits (65), Expect = 9.0
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Frame = -3
Query: 472 PXGGGPRXXXXFGXPPXPXPXXGXWPPPPVXXXXXPP----XGEXXXPXXGVXRXXHPGP 305
P G P F PP P P PPPP+ PP G P P P
Sbjct: 305 PLGSPPGPKPGFAPPPAPPP-----PPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHP 359
Query: 304 SAAAP 290
AAP
Sbjct: 360 DFAAP 364
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.136 0.439
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,606,675
Number of Sequences: 237096
Number of extensions: 2485065
Number of successful extensions: 8276
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7177
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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