Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_C22
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 40 0.002
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 38 0.007
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 35 0.062
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 35 0.062
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.19
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 33 0.25
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 32 0.44
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 32 0.58
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.58
U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical pr... 27 0.59
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 31 0.77
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.77
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 31 1.0
Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 31 1.0
Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical ... 30 2.3
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical p... 29 3.1
Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical pr... 29 3.1
AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical ... 29 3.1
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 29 4.1
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 5.4
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 5.4
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 5.4
U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical pr... 29 5.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.4
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 28 7.2
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 28 7.2
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 28 7.2
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 7.2
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 28 7.2
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical pr... 28 9.5
Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA hai... 28 9.5
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 9.5
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 9.5
AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone stem-... 28 9.5
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 39.9 bits (89), Expect = 0.002
Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 10/154 (6%)
Frame = -3
Query: 590 AGSESRPSPSVEG---PTSQSERGSSTDYPVRGRGTEDRS---PQPRRGRL--RSRGGHP 435
A + R SPS P + + S P R R + S P PRR R +SR P
Sbjct: 343 APARRRRSPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAP 402
Query: 434 QAALVPAREKAGPGFYRAPPRAPTVGS**RR--VPRLRTPDGQTPGSPSPEPRPTCRRRN 261
+ + PAR + P ++PP S + PR R Q S SP PR RRR+
Sbjct: 403 KREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQ---SKSPAPR---RRRS 456
Query: 260 ILRSARGGDPE*RPAGPSRSRCSTGRGPRTDPLR 159
+S + P+G R P P R
Sbjct: 457 PSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRR 490
Score = 32.3 bits (70), Expect = 0.44
Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 8/133 (6%)
Frame = -3
Query: 584 SESR-PSPSVEGPTSQSERGSSTDY----PVRGRGTEDRSPQPRR--GRLRSRGGHPQAA 426
S+SR P+P E P ++ R S P R + P PRR +S+ P+
Sbjct: 395 SKSRSPAPKREIPPARRRRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRR 454
Query: 425 LVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSPEPRPT-CRRRNILRS 249
P++ P R+P GS R R R+P SP+ R + RRR+ S
Sbjct: 455 RSPSKSPQAPRRRRSPS-----GSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSS 509
Query: 248 ARGGDPE*RPAGP 210
+R P P P
Sbjct: 510 SRSRSPPPPPRRP 522
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 38.3 bits (85), Expect = 0.007
Identities = 44/131 (33%), Positives = 54/131 (41%)
Frame = -3
Query: 593 AAGSESRPSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPA 414
++ S S S G +S R SS+ R R RSP+ R R +RGG ++ P
Sbjct: 15 SSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRS---RSPRRRDTRPPARGGRSRS---PI 68
Query: 413 REKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSPEPRPTCRRRNILRSARGGD 234
R + P RA P S PR R P SPSP PR R R+ R R
Sbjct: 69 RRGSPPRGARADRDRPMRPS--PSPPRRRRP------SPSP-PRRDRRDRSGSRQRRRAS 119
Query: 233 PE*RPAGPSRS 201
P PA S S
Sbjct: 120 PRRSPAARSAS 130
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 35.1 bits (77), Expect = 0.062
Identities = 43/154 (27%), Positives = 59/154 (38%), Gaps = 14/154 (9%)
Frame = -3
Query: 572 PSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREKAGPG 393
PSP+V GP+S S +ST P R + RS + + + + P + G
Sbjct: 211 PSPNVPGPSSSS--AASTAEPSRLESSVRRSTRGTIASANRETRNTTSNITPRQSTPGST 268
Query: 392 FYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPS-------PEPRPTCRRRNILRSARGGD 234
R P AP S + RT T S P R T RN +A D
Sbjct: 269 PSRINPTAPRKSSRISEMTTRRTESSVTGSRSSLFTEPERPHTRATHSSRNRANAALNSD 328
Query: 233 PE*RPAGPSRSR---CSTGRG----PRTDPLRNT 153
E A +R+R S RG RT+P+R +
Sbjct: 329 TENSNASNTRTRSGIASVTRGSSSSQRTNPVRTS 362
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 35.1 bits (77), Expect = 0.062
Identities = 43/154 (27%), Positives = 59/154 (38%), Gaps = 14/154 (9%)
Frame = -3
Query: 572 PSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREKAGPG 393
PSP+V GP+S S +ST P R + RS + + + + P + G
Sbjct: 211 PSPNVPGPSSSS--AASTAEPSRLESSVRRSTRGTIASANRETRNTTSNITPRQSTPGST 268
Query: 392 FYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPS-------PEPRPTCRRRNILRSARGGD 234
R P AP S + RT T S P R T RN +A D
Sbjct: 269 PSRINPTAPRKSSRISEMTTRRTESSVTGSRSSLFTEPERPHTRATHSSRNRANAALNSD 328
Query: 233 PE*RPAGPSRSR---CSTGRG----PRTDPLRNT 153
E A +R+R S RG RT+P+R +
Sbjct: 329 TENSNASNTRTRSGIASVTRGSSSSQRTNPVRTS 362
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 33.5 bits (73), Expect = 0.19
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = -3
Query: 497 GTEDRSPQPRRGRLRSRGGHPQAALVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPD 318
GT P PR P A P +A P RAPP P +R P+
Sbjct: 289 GTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAP--ASQPPVREPE 346
Query: 317 GQTPGSPSPEPR 282
G PSP P+
Sbjct: 347 TPDSGYPSPAPQ 358
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Frame = -3
Query: 323 PDGQTPGSPSPEPRPT-CRRRNILRSARGGDPE-----*RPAGPSRSRCSTGRGPRTDPL 162
P+ T G PSP P P +IL + GGDP P+ PS STG P P
Sbjct: 1389 PESSTGGGPSPGPSPNEPSNPSILGPSTGGDPSPGPSPNEPSNPSILGPSTGGDPSPGPS 1448
Query: 161 RN 156
N
Sbjct: 1449 PN 1450
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = -3
Query: 311 TPGSPSPEPRPT-CRRRNILRSARGGDPE*RPA-----GPSRSRCSTGRGPRTDP 165
T G PSP P P +IL + GGDP P+ PS STG GP P
Sbjct: 1416 TGGDPSPGPSPNEPSNPSILGPSTGGDPSPGPSPNGPSNPSVPESSTGGGPSPGP 1470
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.44
Identities = 43/142 (30%), Positives = 53/142 (37%), Gaps = 6/142 (4%)
Frame = -3
Query: 584 SESRPSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPR-RGRLRSRGGHPQAALVPARE 408
S S S S E + D P+ + D S R R R S + P +
Sbjct: 15 SRSSRSSSRENRRRTNSGSGDKDKPM-WKSKRDSSRSSRSRSRSSSESDSRSRSSSPVVK 73
Query: 407 KAGPGFYRAPPRAPTVGS**RRVP-----RLRTPDGQTPGSPSPEPRPTCRRRNILRSAR 243
+ P R P RAP+ RR R R+P +T SPSP RRR I RS
Sbjct: 74 NSPPKRKREPIRAPSASPPRRRRDDSPRKRSRSPPRRTRRSPSPP-----RRRRISRS-- 126
Query: 242 GGDPE*RPAGPSRSRCSTGRGP 177
P R P R + S R P
Sbjct: 127 ---PVRRSRSPPRRQVSRSRSP 145
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.58
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Frame = -3
Query: 593 AAGSESRPSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPA 414
+AG S P+ +E G++ P +P+ + P+AA PA
Sbjct: 78 SAGGGSYPAKKRRVARDYAEGGAAPAAPAEPASAPAPAPEAAPAPEPTPAPAPEAAPAPA 137
Query: 413 REKA------GPGFYRAPPRAPTVG----S**RRVPRLRTPDGQTPGSPSPEPRPTCRRR 264
+ A G G Y A APT G S RRV R +G P +P+ EP P
Sbjct: 138 PDAAPTAPAAGAGGYSAGADAPTGGGSYPSKKRRVARDYAEEGAAPAAPA-EPAPVPAPE 196
Query: 263 NILRSARGGDPE*RP 219
+A PE P
Sbjct: 197 PAPEAAPAPAPEAAP 211
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.58
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Frame = -3
Query: 584 SESRPSPSVEGPTSQSERGSSTDYP-----VRGRGTEDRSPQPRRGRLRSRGGHP----- 435
S SR S P +S R S + P ++ + RSP P + R R+R G P
Sbjct: 117 SRSRSSSRSRSPVRESRRRSESRSPSPKRDLKREASRSRSPLPAKDRSRTRSGSPPKNGG 176
Query: 434 --QAALVPAREKAGPGFYRAPPRAPTVGS 354
+ ++ R + G R+ R+P+ GS
Sbjct: 177 DRKRSVSRGRSHSRDGSNRSVSRSPSPGS 205
>U49947-6|AAA93424.1| 85|Caenorhabditis elegans Hypothetical
protein C30G4.5 protein.
Length = 85
Score = 27.1 bits (57), Expect(2) = 0.59
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 547 LLKVSAEVPPTIQFEAEVPKTGHPNPD 467
L KV+ + PPTI E E PK + PD
Sbjct: 9 LRKVNEQQPPTIIEEDETPKRANRPPD 35
Score = 23.8 bits (49), Expect(2) = 0.59
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -1
Query: 430 RRSSRPVKKQGLGFIERHLEPQPSDPSDD 344
+R++RP QG ++ SD SDD
Sbjct: 28 KRANRPPDLQGFSILDEKWRSSCSDDSDD 56
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 300 TTGSLPVWRAQAWHTSSLGSDGWGSRWRSIKPRPCFFTGRD 422
TTG LP++ +WH +SLG S +K +P F G D
Sbjct: 652 TTGKLPIF--PSWHLTSLGDSSIYSHGAGLKNQPNFKIGGD 690
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.77
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 7/127 (5%)
Frame = -1
Query: 535 SAEVPPTIQFEAEVPKTGHPNPDADASDHEVGTHRRRSSRPVKKQGLGFIERHLEPQPSD 356
+A PP +F P+ A + +H SS PV++QG ++ P PS
Sbjct: 243 NAASPPVQEFAPPPPQ--QQQQQFQAPPPPMASHSSISSTPVQQQGFAPPQQFGGPPPSG 300
Query: 355 PSDDVCHAC--ARQTGRLPVVPPRSHDQRVVGVTYYAQPGEGTPNDA----PQDPVVADV 194
P + +Q + PP+ Q+ G P G P + P A
Sbjct: 301 PPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPS 360
Query: 193 PQA-GGP 176
PQ+ GGP
Sbjct: 361 PQSFGGP 367
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 1/93 (1%)
Frame = -3
Query: 437 PQAALVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSPEPRPTCRRRNI 258
PQ A + P +AP + + P+ P Q P P+P P P ++
Sbjct: 371 PQQAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQP 430
Query: 257 LRSARGGDPE*RPAGPSRS-RCSTGRGPRTDPL 162
+ + P P+ P ++ T + DP+
Sbjct: 431 VTQQQASAPPTSPSAPVQAPNTPTQKASSQDPI 463
>Z81131-1|CAB03423.4| 464|Caenorhabditis elegans Hypothetical
protein T24D1.2 protein.
Length = 464
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Frame = -3
Query: 590 AGSESRPSP----SVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGG 441
A + R SP + S+ G S+ VRGRGT + RRGR +RGG
Sbjct: 53 AAARERASPYSRSRIRSTAGTSDAGPSSSSSVRGRGTRG-TTSARRGRGSARGG 105
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.1 bits (67), Expect = 1.0
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 268 GVTYYAQPGE-GTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKRYIVPP 119
G YAQPG G P DA D + Q G PG G P S G PP
Sbjct: 257 GQAGYAQPGPAGPPGDAGPDGAPGNPGQPGAPGD--AGAPGSGGGCDHCPP 305
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 530 GSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREK 405
G + RGRG D SP+ RG +SRGG + R++
Sbjct: 152 GGRGGFTPRGRGGNDFSPRGGRGNFQSRGGGSRVGFSDKRKQ 193
>Z92773-4|CAB07130.2| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 593 AAGSESRP-SPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLR--SRGG 441
++ S RP S GP S DY +G +DR RRG +R SRGG
Sbjct: 321 SSASNRRPVESSSRGPPPPPSSSSRRDYSHQGDRNDDRFENHRRGVIRGASRGG 374
>Z81114-8|CAB97236.1| 584|Caenorhabditis elegans Hypothetical
protein W08E3.2 protein.
Length = 584
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 593 AAGSESRP-SPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLR--SRGG 441
++ S RP S GP S DY +G +DR RRG +R SRGG
Sbjct: 321 SSASNRRPVESSSRGPPPPPSSSSRRDYSHQGDRNDDRFENHRRGVIRGASRGG 374
>Z92797-1|CAB07234.1| 552|Caenorhabditis elegans Hypothetical
protein H25P06.1 protein.
Length = 552
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 305 RESARLACAGVAHVVTRIRRLGLEVALD 388
R SA LA A +A V+ R+RR + VA+D
Sbjct: 411 RRSANLAAAAIACVLNRVRRPNMLVAID 438
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 470 RRGRLRSRGGHPQAALVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSP 291
RR R R+R P P R P PP P ++ + + P Q P P P
Sbjct: 79 RRERCRNRRPQPTPGPPPPRNNCLP-----PPGPPPPC---QQYQQPQPPPCQRPQPPQP 130
Query: 290 EPRPTCRRR-NILRSARGGDPE*RPAGPSRSR 198
+P+P +R L S RG + + +P P + +
Sbjct: 131 QPQPYPQRTGGCLPSPRGYENQPQPPQPQQQQ 162
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 470 RRGRLRSRGGHPQAALVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSP 291
RR R R+R P P R P PP P ++ + + P Q P P P
Sbjct: 79 RRERCRNRRPQPTPGPPPPRNNCLP-----PPGPPPPC---QQYQQPQPPPCQRPQPPQP 130
Query: 290 EPRPTCRRR-NILRSARGGDPE*RPAGPSRSR 198
+P+P +R L S RG + + +P P + +
Sbjct: 131 QPQPYPQRTGGCLPSPRGYENQPQPPQPQQQQ 162
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -3
Query: 470 RRGRLRSRGGHPQAALVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSP 291
RR R R+R P P R P PP P ++ + + P Q P P P
Sbjct: 79 RRERCRNRRPQPTPGPPPPRNNCLP-----PPGPPPPC---QQYQQPQPPPCQRPQPPQP 130
Query: 290 EPRPTCRRR-NILRSARGGDPE*RPAGPSRSR 198
+P+P +R L S RG + + +P P + +
Sbjct: 131 QPQPYPQRTGGCLPSPRGYENQPQPPQPQQQQ 162
>AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical
protein Y108G3AL.3 protein.
Length = 685
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -3
Query: 323 PDGQTPGSPSPEPRPTCRRRNILRSA-RGGDPE*RPAGPSRSRCSTGRGPRTDPLRNTAL 147
P +TP + + RPT RR ++ ++A + D R S S + PLR
Sbjct: 510 PRAKTPNQKNKDERPTTRRSSVDKNAPKRNDSVPRERKSSVSHDESKPPKPIGPLRGNKY 569
Query: 146 DGEAVHRPTVSDALD 102
DG+ V S +D
Sbjct: 570 DGDVVLGRAESPGID 584
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 317 GQTPGSPSPEPRPTCRRRNILRSARGG 237
G P P PEP+P C+ ++A GG
Sbjct: 460 GNGPVPPIPEPKPLCKGLKFKKTANGG 486
>Z46787-10|CAA86749.1| 154|Caenorhabditis elegans Hypothetical
protein C16C10.11 protein.
Length = 154
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -3
Query: 461 RLRSRGGHPQAALVPAREKAGPGFYRAPPRAPTVGS**RRVPRLRTPDGQTPGSPSPEP 285
R R+ P A + A A + APP P + P TP G G+PS P
Sbjct: 3 RRRTASPSPSAPVRSAPRPAAQSSFAAPPPRPAAAAPAYHPPAAPTPMGAPMGAPSQGP 61
>Z34799-2|CAA84318.1| 692|Caenorhabditis elegans Hypothetical
protein F34D10.4 protein.
Length = 692
Score = 29.5 bits (63), Expect = 3.1
Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 4/157 (2%)
Frame = -3
Query: 539 SERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREKAGPGF-YRAPPRAPT 363
++ G+++ Y +R R + R+ P R+ ++ + +R +A RAP RAP
Sbjct: 334 AQNGNTSHYELRSR-SRGRATVPMNANFRAGHQTGSSSRLESRSRATASVGARAPSRAPA 392
Query: 362 VGS**RRVPRLRTPDGQTPGSPS-PEPRPTCRRRNILRSARGGDPE*RPAGPSRSRCSTG 186
S R R + P +P+ P + DP P P R R ST
Sbjct: 393 PSSTSRETRSTRRSPSKGPSAPAYTLPFGGSTPNHEPMDLELEDPV-PPPRPDRPRASTS 451
Query: 185 RGPRTDPL-RNTALDGEAVHRP-TVSDALDRPALEVG 81
+ RN G RP V D + + VG
Sbjct: 452 LNTSVSQIKRNEVQTGVYNIRPQRVQDTVQKARTAVG 488
>AC017117-3|AAF16619.1| 339|Caenorhabditis elegans Hypothetical
protein F43C11.9 protein.
Length = 339
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -1
Query: 595 KQPAQRAGRRHQSRAQLLKVSAEVPPTIQFEAEVPKTGHPNPDADASDHEVGTHRRRSSR 416
+QP + S +QL SA PP+ + ++G P DAD+S EV +R+
Sbjct: 226 RQPESKPSNEASS-SQLEPTSASQPPSRVDQILKSRSGLPTKDADSSS-EVAPRKRKPKS 283
Query: 415 P 413
P
Sbjct: 284 P 284
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 250 QPGE-GTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKRYIVPPCPMHWIDLPSR*EPI 74
+PG+ GTP +A V + + GGPG P G P G+ P +H P R P
Sbjct: 167 RPGQRGTPGEAGTPGPVGEPGETGGPG--PQGRPGQRGEP--GQPGTVHTPGNPGRPGPQ 222
Query: 73 SRRRYAGTP 47
R G P
Sbjct: 223 GPRGQQGEP 231
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 29.1 bits (62), Expect = 4.1
Identities = 39/145 (26%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Frame = -3
Query: 593 AAGSESRPSPSVEGPT-SQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVP 417
A+ + +R +PS + P + + R S PV P+P R G P+AA+ P
Sbjct: 248 ASAAPTRRAPSPKAPVVAPTRRAPSPKAPVAS--VAPVKPKPFVARPAPSFGKPRAAVAP 305
Query: 416 AREKAGPGFYRAPPRAPTVGS**RRV----PRLRTPDGQTPGSPSP-EPRPTCRRRNILR 252
AR P + P A + RV P + T +P +P R +
Sbjct: 306 AR---APQITQRAPAATRPSTSAIRVTPIAPNVVRNGAPTTAQQAPRKPIGIARPQTSSG 362
Query: 251 SARGGDPE*RPAGPSRSRCSTGRGP 177
A G P R A P+ S S R P
Sbjct: 363 IAAPGAPRSRIAMPTTSSSSLARRP 387
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 140 PRRARCSAGGLSWAPCLWNIGYDWVLRGVIRG--PLPGLSVICYADDTLVVAPGRD 301
P R + G + + +W++ +I+G P+ ++V+ + D+T VV+ G+D
Sbjct: 535 PDNQRLATGSIDTSVIIWDMKKPGEHPVIIKGAHPMSSVNVVRWLDETTVVSAGQD 590
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPG-QTPCGTPRSTG 140
PG P AP P A Q GGPG Q G P + G
Sbjct: 248 PGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG 284
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPG-QTPCGTPRSTG 140
PG P AP P A Q GGPG Q G P + G
Sbjct: 248 PGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG 284
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = -3
Query: 335 RLRTPDGQTPGSPSPEPRPTCRRRNILRSARGGDPE*RPAGPSRSRCSTGRGPRTDPLRN 156
R TP+ PG PS +P +R N + E P+G S S+GRG + +
Sbjct: 29 REETPEDDEPG-PSTKPSGKRQRGN---KCNNTESEPNPSGRKTSATSSGRGKYRNRRTD 84
Query: 155 TALDGEAVHRPTVSDAL 105
+ E PT S+ L
Sbjct: 85 GTEEEEEDDDPTDSEPL 101
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 264 TPTTRWSWLRGGTTGSLP 317
TPTT ++W GGTT LP
Sbjct: 487 TPTTTYNWPTGGTTWMLP 504
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 189 CGTSATTGSCGASFGV-PSPG*A*YVTPTTRWSWLRGGTTGSLP 317
C ++T S + F + P+P + + TT ++W GGTT +LP
Sbjct: 746 CKKTSTISSSSSKFSITPTPTPS---SGTTTYNWPTGGTTRTLP 786
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPG-QTPCGTPRSTG 140
PG P AP P A Q GGPG Q G P + G
Sbjct: 248 PGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG 284
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPG-QTPCGTPRSTG 140
PG P AP P A Q GGPG Q G P + G
Sbjct: 248 PGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPG 284
>U41031-2|AAA82619.2| 615|Caenorhabditis elegans Hypothetical
protein C16B8.2 protein.
Length = 615
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 559 SRAQLLKVSAEVPPTIQFEAEVP---KTGHPNPDADASDHE 446
S++ + K+ E+PPT+ P KT PNPD DAS+ E
Sbjct: 359 SQSHIKKIHLEMPPTLLPHRRKPKKMKTTTPNPD-DASEVE 398
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.4
Identities = 39/143 (27%), Positives = 46/143 (32%), Gaps = 5/143 (3%)
Frame = -3
Query: 578 SRPSPSVEGPTSQSERGSSTDYPV-RGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREKA 402
S P P G GS P RG P P+ G G P R+K
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP-PPPRQKR 337
Query: 401 GPGFYRAPPRAPTVGS**RRVPRLRTPDGQTP-GSPSPEPRPTCRRRNILRSARGGDPE* 225
+AP R+P GS P P G+ P G P + R R G P
Sbjct: 338 -----QAPERSPPTGS----PPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 388
Query: 224 RPAGPSRSRCST---GRGPRTDP 165
P S + RGPR P
Sbjct: 389 GPRKSSEESSESREEPRGPRRSP 411
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.4
Identities = 39/143 (27%), Positives = 46/143 (32%), Gaps = 5/143 (3%)
Frame = -3
Query: 578 SRPSPSVEGPTSQSERGSSTDYPV-RGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREKA 402
S P P G GS P RG P P+ G G P R+K
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP-PPPRQKR 358
Query: 401 GPGFYRAPPRAPTVGS**RRVPRLRTPDGQTP-GSPSPEPRPTCRRRNILRSARGGDPE* 225
+AP R+P GS P P G+ P G P + R R G P
Sbjct: 359 -----QAPERSPPTGS----PPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 409
Query: 224 RPAGPSRSRCST---GRGPRTDP 165
P S + RGPR P
Sbjct: 410 GPRKSSEESSESREEPRGPRRSP 432
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.4
Identities = 39/143 (27%), Positives = 46/143 (32%), Gaps = 5/143 (3%)
Frame = -3
Query: 578 SRPSPSVEGPTSQSERGSSTDYPV-RGRGTEDRSPQPRRGRLRSRGGHPQAALVPAREKA 402
S P P G GS P RG P P+ G G P R+K
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP-PPPRQKR 343
Query: 401 GPGFYRAPPRAPTVGS**RRVPRLRTPDGQTP-GSPSPEPRPTCRRRNILRSARGGDPE* 225
+AP R+P GS P P G+ P G P + R R G P
Sbjct: 344 -----QAPERSPPTGS----PPTGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRG 394
Query: 224 RPAGPSRSRCST---GRGPRTDP 165
P S + RGPR P
Sbjct: 395 GPRKSSEESSESREEPRGPRRSP 417
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = -3
Query: 563 SVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRS-RGGHPQAA---LVPAREKAG 399
S + +++ ++ S D + G G+ED++P+ +G+ S P+ A L+P+ +++G
Sbjct: 588 SEQETSAKDQKKSEADKDLSGEGSEDQAPELGKGKDESVESKDPEVAEANLIPSVQRSG 646
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 53 PRIPPPTDRLLPRGQVDPVHRTRWDDVP 136
P PPP LLP G++ P + + +D P
Sbjct: 3 PPPPPPPPPLLPSGEILPSRKWKTEDAP 30
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 247 PG-EGTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKR 134
PG +G+P + PQD D AG PG P G P G +
Sbjct: 203 PGPKGSPGEPPQDGKSGDDGMAGQPG--PIGRPGRDGMK 239
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 247 PG-EGTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKR 134
PG +G+P + PQD D AG PG P G P G +
Sbjct: 203 PGPKGSPGEPPQDGKSGDDGMAGQPG--PIGRPGRDGMK 239
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/59 (25%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = -3
Query: 563 SVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRS-RGGHPQAA---LVPAREKAG 399
S + +++ ++ S D + G G+ED++P+ +G+ S P+ A L+P+ +++G
Sbjct: 588 SEQETSAKDQKKSEADKDLSGEGSEDQAPELGKGKDESVESKDPEVAEANLIPSVQRSG 646
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/70 (30%), Positives = 28/70 (40%)
Frame = -3
Query: 587 GSESRPSPSVEGPTSQSERGSSTDYPVRGRGTEDRSPQPRRGRLRSRGGHPQAALVPARE 408
G+ S+ P PTS+ E S + P PQPR R +SRG P +
Sbjct: 395 GASSQSKPPAPSPTSR-ETDSIPEAPAEPIRNIS-PPQPRWTRSQSRGRSEATRRSPPKG 452
Query: 407 KAGPGFYRAP 378
+ P Y P
Sbjct: 453 PSAPPAYTLP 462
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 156 VPQGVCPGPPACGTS 200
V +GVCP PPAC T+
Sbjct: 917 VNRGVCPEPPACDTN 931
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKRYIVP 122
PG PN P P P G PGQ+ GTP G++ I P
Sbjct: 245 PGPKGPNGNPGQPGADGNP--GAPGQS--GTPGGVGEKGICP 282
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKRYIVP 122
PG PN P P P G PGQ+ GTP G++ I P
Sbjct: 212 PGPKGPNGNPGQPGADGNP--GAPGQS--GTPGGVGEKGICP 249
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPGQTPCGTPRSTGKRYIVP 122
PG PN P P P G PGQ+ GTP G++ I P
Sbjct: 245 PGPKGPNGNPGQPGADGNP--GAPGQS--GTPGGVGEKGICP 282
>Z46794-1|CAA86782.1| 367|Caenorhabditis elegans Hypothetical
protein R06F6.1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -3
Query: 218 AGPSRSRCSTGRGPRTDPLRNTALDGEAVHRPTVSDALDRPALEVGADQSAEVCGDAVIL 39
A PS+ R TG+ R P +G + S R E + + C D +L
Sbjct: 156 ASPSKRRPETGKSNRKAPRGRLFTNGGSDSSSVASSPSRRDHWE---EPTLGWCTDEAVL 212
Query: 38 QRRSRE 21
+RRSRE
Sbjct: 213 KRRSRE 218
>Y10114-1|CAA71200.1| 367|Caenorhabditis elegans histone RNA
hairpin-binding protein protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -3
Query: 218 AGPSRSRCSTGRGPRTDPLRNTALDGEAVHRPTVSDALDRPALEVGADQSAEVCGDAVIL 39
A PS+ R TG+ R P +G + S R E + + C D +L
Sbjct: 156 ASPSKRRPETGKSNRKAPRGRLFTNGGSDSSSVASSPSRRDHWE---EPTLGWCTDEAVL 212
Query: 38 QRRSRE 21
+RRSRE
Sbjct: 213 KRRSRE 218
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -1
Query: 247 PGEGTPNDAPQDPVVADVPQAGGPGQT-PCGTPRSTG 140
PGE N PQ + Q G PGQ P G P G
Sbjct: 196 PGENGNNGEPQPGAPGEPGQPGQPGQRGPAGEPGKDG 232
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 159 PQGVCPGPPACGTSATTGSCGASFGVPSP 245
P C PPACG CG FG P P
Sbjct: 29 PPQCCGPPPACG-----NPCGGGFGPPPP 52
>AB060649-1|BAB83255.1| 367|Caenorhabditis elegans histone
stem-loop binding proteinCDL-1 protein.
Length = 367
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -3
Query: 218 AGPSRSRCSTGRGPRTDPLRNTALDGEAVHRPTVSDALDRPALEVGADQSAEVCGDAVIL 39
A PS+ R TG+ R P +G + S R E + + C D +L
Sbjct: 156 ASPSKRRPETGKSNRKAPRGRLFTNGGSDSSSVASSPSRRDHWE---EPTLGWCTDEAVL 212
Query: 38 QRRSRE 21
+RRSRE
Sbjct: 213 KRRSRE 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,127,444
Number of Sequences: 27780
Number of extensions: 588207
Number of successful extensions: 2138
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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