Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_C16
(839 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 64 1e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 62 6e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 60 3e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 59 4e-11
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 55 9e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 55 9e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 1e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 1e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 54 2e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 8e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 46 6e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 5e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 1e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 36 6e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 36 6e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 36 6e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.004
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.023
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.6
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.9 bits (151), Expect = 9e-13
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Frame = +2
Query: 71 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVNLTLHLRHANIRESESTVRIQADLQ 244
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 245 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 418
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 419 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.9 bits (151), Expect = 9e-13
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Frame = +2
Query: 71 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVNLTLHLRHANIRESESTVRIQADLQ 244
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 245 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVS 418
+ W+D L WN E+G L ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 419 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
++ + + + +P D Q C KFGS + +++D V+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 64.5 bits (150), Expect = 1e-12
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 331
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 332 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 499
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 500 KFGSRMPNSDEMDFVI 547
KFGS N D++ +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
G Y V++NGS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.1 bits (144), Expect = 6e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 61.7 bits (143), Expect = 8e-12
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 370
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
G Y V+++GS ++ + M + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 60.9 bits (141), Expect = 1e-11
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDFVI 547
G Y V+++GS ++ + + + +P D Q C KFGS + +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 59.7 bits (138), Expect = 3e-11
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 331
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 332 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 508
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 509 S 511
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 59.7 bits (138), Expect = 3e-11
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 412
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 413 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
V W + + ++ +P D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 59.3 bits (137), Expect = 4e-11
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = +2
Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 403
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 404 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMD 538
G VSW + + ++ +P D Q+C KFGS N ++D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 58.0 bits (134), Expect = 1e-10
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +2
Query: 161 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 328
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 329 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKF 505
PD+VL N A G + +A + G V W + + + +P D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 506 GS 511
GS
Sbjct: 164 GS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 57.2 bits (132), Expect = 2e-10
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 331
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 332 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 499
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 500 KFGS 511
K GS
Sbjct: 170 KLGS 173
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 56.4 bits (130), Expect = 3e-10
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Frame = +2
Query: 158 KIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 328
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 329 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 499
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 500 KFGSRMPNSDEMDFVIDXRIYRM 568
FGS + + +E++ +D + + M
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.8 bits (126), Expect = 9e-10
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +2
Query: 200 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 370
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 371 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 54.8 bits (126), Expect = 9e-10
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +2
Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 412
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 413 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMD 538
++ + + + +P D Q C KFGS + ++D
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 54.4 bits (125), Expect = 1e-09
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +2
Query: 239 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 403
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 404 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
G V W + + ++ +P D QTC KFGS
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.4 bits (125), Expect = 1e-09
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 161 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 337
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 338 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 53.6 bits (123), Expect = 2e-09
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = +2
Query: 89 RNITVPHDRLAPRNVRSGLPPDSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWI 256
RNIT+ + L + LP K VV + +R + E + + + +W
Sbjct: 35 RNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWR 94
Query: 257 DKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIK 427
D RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 95 DSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
Query: 428 RLDISTPISMQLDNWPNDMQTCTFKFGS 511
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 48.4 bits (110), Expect = 8e-08
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
Frame = +2
Query: 152 DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 322
D +V + L +R A I + + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 323 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 493
+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 494 TFKFGSRMPNSDEMDFV 544
+ + S +D++ F+
Sbjct: 175 SLRMASYGWTTDDLVFL 191
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 46.8 bits (106), Expect = 2e-07
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Frame = +2
Query: 167 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 343
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 344 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMQTCTFKFGS 511
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
Query: 512 RMPNSDEM 535
S+E+
Sbjct: 180 WSHGSNEI 187
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.6 bits (103), Expect = 6e-07
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Frame = +2
Query: 152 DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 322
D VV + + +R + I + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 323 LWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 493
+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 494 TFKFGSRMPNSDEMDFV 544
+ + S +D++ F+
Sbjct: 175 SLRMASYGWTTDDLVFL 191
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 200 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 379
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 380 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 39.1 bits (87), Expect = 5e-05
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Frame = +2
Query: 92 NITVPHDRLAPRNVRSGLPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRL 268
+ +V +D+ N G PP + V +T++ L +++ E + + + W D RL
Sbjct: 18 SFSVSYDKRVRPNY--GGPP---VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRL 72
Query: 269 SWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSW 421
++ G T V SE +W PD +N ATT+ ++ R+ ++GS++
Sbjct: 73 AFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITR 128
Query: 422 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
RL I+ M L +P D Q C + S
Sbjct: 129 SIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.9 bits (84), Expect = 1e-04
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)
Frame = +2
Query: 92 NITVPHDRLAPRNVRSGLPPDSKIVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRL 268
+ +V +D+ N G PP + V +T++ L +++ E + + W D RL
Sbjct: 18 SFSVSYDKRVRPNY--GGPP---VEVGVTMYVLSISSVSEVLMDFTLDFYFRQFWTDPRL 72
Query: 269 SWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSW 421
++ G T V SE +W PD +N ATT+ ++ R+ ++GS++
Sbjct: 73 AFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITR 128
Query: 422 IKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
RL I+ M L +P D Q C + S
Sbjct: 129 SIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +2
Query: 251 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 403
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 404 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 511
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 35.5 bits (78), Expect = 6e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +2
Query: 116 LAPRNVRSGLPP-DSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 286
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 287 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 460
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 461 LDNWPNDMQTCTFKFGS 511
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 35.5 bits (78), Expect = 6e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +2
Query: 116 LAPRNVRSGLPP-DSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 286
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 287 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 460
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 461 LDNWPNDMQTCTFKFGS 511
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 35.5 bits (78), Expect = 6e-04
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Frame = +2
Query: 116 LAPRNVRSGLPP-DSKIVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 286
L+ R + LPP + VN++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 287 WGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQ 460
+ + + +W PD ++ R+ NG+V+++ R + +
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 461 LDNWPNDMQTCTFKFGS 511
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 33.5 bits (73), Expect = 0.002
Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 370
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 371 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMPNSDEMDF 541
+ ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
Query: 542 V 544
+
Sbjct: 163 I 163
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.004
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 161 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 334
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 335 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 508
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 509 S 511
S
Sbjct: 257 S 257
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 31.9 bits (69), Expect = 0.008
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 487
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 488 TCTFKFGSRMPNSDEMDFVID 550
C + S +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 30.3 bits (65), Expect = 0.023
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 11/131 (8%)
Frame = +2
Query: 134 RSGLPPDSKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGC 295
+ GLP ++V+ + + N I + R+ ++ +WI+ RL + G+
Sbjct: 6 KQGLP----VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYV 61
Query: 296 STWLVSSERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQ 460
+ + LW+PD LNA + AL + S+ N +V + R+ M+
Sbjct: 62 TLPPEFFDSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQME 119
Query: 461 LDNWPNDMQTC 493
+P D+Q C
Sbjct: 120 FQLYPMDIQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 304 PSAAAPLPCVPTQS 263
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,734
Number of Sequences: 438
Number of extensions: 4906
Number of successful extensions: 116
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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