Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_C15
(796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 40 0.003
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.15
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 32 0.46
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 0.46
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 30 1.8
11_06_0447 - 23710477-23710668,23711547-23712026 29 3.2
08_02_1291 + 25930056-25930067,25930289-25930334,25930434-259305... 29 3.2
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.3
09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715 29 5.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.4
07_03_0809 - 21669632-21669637,21669871-21670131,21670573-216707... 28 7.4
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 7.4
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 28 7.4
03_01_0515 - 3864796-3865425 28 9.8
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 766 GXAGXPXXEPPGXXAXGPXAXXXXXXGXXGGXGPAPTGXXGXGXXXXXPXGXGXXPXXXA 587
G G PPG G G GG G AP G G G P G G
Sbjct: 151 GGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGG 210
Query: 586 GXXXXGAP 563
G GAP
Sbjct: 211 GGGEGGAP 218
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = -1
Query: 775 GXXGXAGXPXXEPPGXXAXG-PXAXXXXXXGXXGGXGPAPTGXXGXGXXXXXPXGXG 608
G G G PPG G P + G G PAP G G G G G
Sbjct: 96 GAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGG 152
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 766 GXAGXPXXEPPGXXAXGPXAXXXXXXGXXGGXGPAPTGXXGXGXXXXXPXGXG 608
G G P PPG G G GG G G G P G G
Sbjct: 112 GGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGG 164
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.15
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +1
Query: 496 PXXXXGPPXXXXKXPXPXLXXLXGPQXXXAPRPXXXXPPXXXGXXXXXPXPXXPWGXGPX 675
P PP K P P GP P+ PP G P P P G
Sbjct: 330 PPPKAAPPPPPPKGPPPP-PPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASR 388
Query: 676 PPXXP 690
PP P
Sbjct: 389 PPAAP 393
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = +3
Query: 537 PXXXSXXAXGAPXXXXPAXXXGXXPXPXGXXXXXPX---PXXPVGAGPXPPXXPXXXXXX 707
P A AP P P P G P P P GP PP P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Query: 708 AXGPXAXXPGGSXXGXPAXPXXP 776
GP P G PA P P
Sbjct: 375 G-GPPPPPPKGGASRPPAAPGVP 396
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 3/73 (4%)
Frame = +3
Query: 558 AXGAPXXXXPAXXXGXXPXPXGXXXXXPXPXXPVGAGPXPP---XXPXXXXXXAXGPXAX 728
A AP P P P P P P G P PP P P
Sbjct: 309 ASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPP 368
Query: 729 XPGGSXXGXPAXP 767
PGG G P P
Sbjct: 369 PPGGKKGGPPPPP 381
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/61 (24%), Positives = 19/61 (31%)
Frame = +2
Query: 515 PPRXXXRXPXPXSGXXGGPXXXXPRXXXRXXPPXXXXXXXXAXPXXPRGGXAXAPXXXPX 694
PP + P P G P P+ PP P P+GG + P
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGV 395
Query: 695 P 697
P
Sbjct: 396 P 396
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +3
Query: 609 PXPXGXXXXXPXPXXPVGAGPXPPXXPXXXXXXAXGPXAXXPGGSXXGXPAXPXXPXXGF 788
P P P P P A P PP A GP P P P G
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 789 P 791
P
Sbjct: 377 P 377
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 343 HQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQM-QGQVDYDFGVGG 179
H P AAA P VP++ P L + GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.3 bits (70), Expect = 0.46
Identities = 31/118 (26%), Positives = 35/118 (29%), Gaps = 2/118 (1%)
Frame = +1
Query: 394 NHRRGLRSPRPWYLITASXPWDXGXGXXPXXFSXPXXXXGPPXXXXKXPXPXLXXLX-GP 570
+H G P P L + G G P + P PP P P GP
Sbjct: 295 HHHHGHHPPPPHPLPPGAGA-GAGTGAPPPPPAHPAAPAPPPPA----PSPSAAGAGSGP 349
Query: 571 QXXXAPR-PXXXXPPXXXGXXXXXPXPXXPWGXGPXPPXXPXXXXXXXXXPXRXSPGA 741
P P PP P G GP PP P P + SPGA
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPFKKSPGA 407
Score = 31.5 bits (68), Expect = 0.80
Identities = 23/94 (24%), Positives = 25/94 (26%), Gaps = 3/94 (3%)
Frame = +3
Query: 495 PXXXXGAPXEXXXGPXXXSXXAXGAPXXXXPAXXXGXXPXPXGXXXXXPXPXXPVG---A 665
P AP P + A P P P P G P P G
Sbjct: 324 PPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAA-PRPPGPGPGPPPPPGAAGRGGG 382
Query: 666 GPXPPXXPXXXXXXAXGPXAXXPGGSXXGXPAXP 767
GP PP P P PG + A P
Sbjct: 383 GPPPPALPGGPRARGPPPFKKSPGAAAAAAQADP 416
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 241 VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTL 357
V+ H + R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>11_06_0447 - 23710477-23710668,23711547-23712026
Length = 223
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/97 (26%), Positives = 29/97 (29%)
Frame = -1
Query: 679 GGXGPAPTGXXGXGXXXXXPXGXGXXPXXXAGXXXXGAPXAXXXXXXGPXXXSXGAPXXX 500
GG A G G G G G GA G GA
Sbjct: 51 GGASAASAGLPGGGAVVL---GGGASAAGAGLPGGGGAAVPGVDATGGEEVAGGGASVPG 107
Query: 499 XGXKXGXVXSQXXYPRGXXPLLDTTGAESVVPGGGCS 389
G + + R P +DTTG E V GGG S
Sbjct: 108 GGAGPLGSGASAAFVRMVVPGVDTTGGEEVAAGGGAS 144
>08_02_1291 +
25930056-25930067,25930289-25930334,25930434-25930546,
25930645-25930930,25931357-25931421,25931642-25931693,
25931774-25931883,25932611-25932641,25932853-25933004,
25934622-25934840
Length = 361
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 256 HGGLGLTNVSMSQMQGQVDYDFGVGGRLPI 167
+GG L ++Q G Y +G GGRLP+
Sbjct: 100 YGGPALPRYGIAQFPGGSGYPYGYGGRLPM 129
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 514 PPXXXXKXPXPXLXXLXGPQXXXAPRPXXXXPPXXXGXXXXXPXPXXPWGXGPXPPXXP 690
PP P P P +P P PP P P P GP P P
Sbjct: 1140 PPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAP 1198
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/101 (23%), Positives = 27/101 (26%)
Frame = +3
Query: 483 PXFXPXXXXGAPXEXXXGPXXXSXXAXGAPXXXXPAXXXGXXPXPXGXXXXXPXPXXPVG 662
P + P GAP P + G P P G P P +G
Sbjct: 1049 PHYLPGEVGGAPSPPSPPPPQRENTSVGIQGGIPPLPPP--LPPTLGDYGVAPPPPS-IG 1105
Query: 663 AGPXPPXXPXXXXXXAXGPXAXXPGGSXXGXPAXPXXPXXG 785
AG PP P P G PA P G
Sbjct: 1106 AGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIG 1146
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 4/86 (4%)
Frame = +2
Query: 446 PSPGIXXLGXX--PPXFXAXXXXGGPPRXXXRXPXPXSGXXGGPXXXXPRXXXR-XXPPX 616
P P I LG PP GG P P P G GGP P R PP
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVP------PPPPVGGLGGPPAPPPPAGFRGGTPPP 1176
Query: 617 XXXXXXXAXPXXPRG-GXAXAPXXXP 691
P PRG G P P
Sbjct: 1177 NAHGGVAPPPPPPRGHGGVGGPPTPP 1202
>09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715
Length = 462
Score = 28.7 bits (61), Expect = 5.6
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +1
Query: 220 ETC*HS*VRVHRADTGRSSNELDRQTTELERRGMGLQHLAGVLGTLVEA*RGTAKRGCNH 399
E C + V V + D RS L T++ ++ G H A L T +E G R C H
Sbjct: 57 EKCKNVEVNVQQEDQQRSIPLLLYLTSQSDKNGSTPLHFAASLKTSIE---GFTSRLCEH 113
Query: 400 RRGLRSP 420
R +SP
Sbjct: 114 FRPKQSP 120
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = +3
Query: 489 FXPXXXXGAPXEXXXGPXXXSXXAXGAPXXXXPAXXXGXXPXPXGXXXXXPXPXXPVGAG 668
+ P P + P G P PA G P P G P P G
Sbjct: 4 YRPYAPHPPPPQGGFPPQPPPMNPYGPPPPQQPAY--GHMPPPQGAPPPFLAPPPPPPPG 61
Query: 669 PXPPXXP 689
P PP P
Sbjct: 62 PPPPHQP 68
>07_03_0809 -
21669632-21669637,21669871-21670131,21670573-21670752,
21671458-21672819
Length = 602
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 128 SLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMN 283
+L +D L+ YD+ PPDS+ V HA + +R+L + +N
Sbjct: 160 NLWTQVDILILRYDK--PPDSRFVQEALAAHAHATEGSETTAIRLLEVISLN 209
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 425 GRGERSPRRWLQPRLAVPRQASTSVPRTP 339
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 370 VRPPQAFRGHQPSAAAPFPCVPTQSFVDPIHLKICQYPHGGLGLTNVSMSQMQGQV 203
++PP H + AP P +P+ S P++ + PH S +QM Q+
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQM 606
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/71 (23%), Positives = 19/71 (26%)
Frame = +3
Query: 522 EXXXGPXXXSXXAXGAPXXXXPAXXXGXXPXPXGXXXXXPXPXXPVGAGPXPPXXPXXXX 701
E P A P P+ P G P P V + P PP P
Sbjct: 34 EAEASPPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPP 93
Query: 702 XXAXGPXAXXP 734
A P P
Sbjct: 94 PPAASPPPPPP 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,101,925
Number of Sequences: 37544
Number of extensions: 462928
Number of successful extensions: 1438
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1367
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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