Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_C12
         (816 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81571-7|CAB04620.1|  272|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical...    29   4.0  
AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical...    29   4.0  
Z81039-10|CAB02777.2|  181|Caenorhabditis elegans Hypothetical p...    28   7.0  
AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical ...    28   9.2  
AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical ...    28   9.2  

>Z81571-7|CAB04620.1|  272|Caenorhabditis elegans Hypothetical
           protein M01G12.9 protein.
          Length = 272

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/31 (35%), Positives = 23/31 (74%)
 Frame = +2

Query: 371 LFDFFCRECSKEQKLALKIGEVPELLCQTML 463
           + D++  + +K+ K+ +KIGE+P++L +T L
Sbjct: 8   VIDYYHSKINKDSKMEIKIGELPKVLNKTYL 38


>AL132949-35|CAI70419.1|  466|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27b protein.
          Length = 466

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 392 HGKRNQKARSGKSLDLLARESRKRRRESGLQQ 297
           H K  QKARS  +L+ LA++++K + E   Q+
Sbjct: 97  HSKTRQKARSSVTLEKLAQKNQKMKEELKKQE 128


>AL132949-34|CAB61101.3|  574|Caenorhabditis elegans Hypothetical
           protein Y53F4B.27a protein.
          Length = 574

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 392 HGKRNQKARSGKSLDLLARESRKRRRESGLQQ 297
           H K  QKARS  +L+ LA++++K + E   Q+
Sbjct: 205 HSKTRQKARSSVTLEKLAQKNQKMKEELKKQE 236


>Z81039-10|CAB02777.2|  181|Caenorhabditis elegans Hypothetical
           protein C25D7.7 protein.
          Length = 181

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 477 RNPRESIV*QRSSGTSPILRA-SFCSLEHSRQKKSKSAL 364
           RN +E IV  + S   PIL   + C L H RQ +S+  L
Sbjct: 94  RNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEEGL 132


>AF043706-2|AAB97604.2|  730|Caenorhabditis elegans Hypothetical
           protein ZC123.1 protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 469 RVSPGYHAPLYALLG*DRPPTFINSPL 549
           R +PG H     LLG   PPT I+ P+
Sbjct: 244 RDAPGLHCQPIGLLGQQSPPTLISKPV 270


>AC006832-6|AAY55905.1|  170|Caenorhabditis elegans Hypothetical
          protein ZK355.7 protein.
          Length = 170

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 60 DKDSLRGDVVLAVNDGKY 7
          D D++ GDVV+ VNDG+Y
Sbjct: 46 DCDAIFGDVVVDVNDGRY 63


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,178,920
Number of Sequences: 27780
Number of extensions: 295685
Number of successful extensions: 646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)