Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_C02
         (1172 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p pro...    31   3.0  
AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA...    31   3.0  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    31   3.0  
AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA...    31   4.0  

>AY069683-1|AAL39828.1|  993|Drosophila melanogaster LD45449p
           protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
 Frame = -2

Query: 628 GPNPXKFLGXLIFSKTPXPXKGXWALFPQKXKGXFFXPPPKXRX----PPPXXGFFPPPX 461
           GP P    G   +   P P  G +   P    G +  PPP        PPP   + PPP 
Sbjct: 434 GPPPPPPSGN--YGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 491

Query: 460 GXXXXXXPP 434
                  PP
Sbjct: 492 PSGNYGPPP 500


>AE014298-2035|AAF48374.1|  993|Drosophila melanogaster CG9411-PA
           protein.
          Length = 993

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 20/69 (28%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
 Frame = -2

Query: 628 GPNPXKFLGXLIFSKTPXPXKGXWALFPQKXKGXFFXPPPKXRX----PPPXXGFFPPPX 461
           GP P    G   +   P P  G +   P    G +  PPP        PPP   + PPP 
Sbjct: 434 GPPPPPPSGN--YGPPPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPPPSGNYGPPPP 491

Query: 460 GXXXXXXPP 434
                  PP
Sbjct: 492 PSGNYGPPP 500


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 31.1 bits (67), Expect = 3.0
 Identities = 29/113 (25%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
 Frame = -2

Query: 760 PTLLXXKXPILKFIXFPNPQ--KPF*ISKGLXXKKKXIXPXAGPPXGPNPXKFLGXLIFS 587
           P ++    P+ K++  P P    P    +G    K  I P   PP  P P K+L  +  +
Sbjct: 246 PPVVPTSPPVPKYVPPPTPTYIPPPPKKQGYDYPKPAI-PFP-PPTAP-PQKYLPPVTTT 302

Query: 586 KTPXPXKGXWALFPQKXKGXFFXPPPKXRXPP--PXXGFFPPPXGXXXXXXPP 434
           + P P    +   PQ  +G  +  P     PP  P   + PP         PP
Sbjct: 303 QAPPPPPPKYLPPPQVKQGYDYPKPAIPFPPPTAPPQKYLPPVTTTKAPPPPP 355



 Score = 31.1 bits (67), Expect = 3.0
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = -2

Query: 637 PPXGPNPXKFLGXLIFSKTPXPXKGXWALFPQKXKGXFFXPPPKXRXPPP 488
           PP  P P K+L  +  +K P P      L P + K  +  P P    PPP
Sbjct: 333 PPTAP-PQKYLPPVTTTKAPPPPPTVKYLPPPQVKQGYDYPKPAVPFPPP 381


>AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA
            protein.
          Length = 440

 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 1090 PXKKKKXXPPPXVFF*KXPPPKKXXXFXPPPP 995
            P  KK    PP V+    PPP K   + PPPP
Sbjct: 142  PPTKKVVIAPPPVYV---PPPTKKVVYTPPPP 170



 Score = 30.7 bits (66), Expect = 4.0
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 1090 PXKKKKXXPPPXVFF*KXPPPKKXXXFXPPPP 995
            P  KK    PP V+    PPP K   + PPPP
Sbjct: 255  PPTKKVVIAPPPVYV---PPPTKKVIYTPPPP 283



 Score = 29.5 bits (63), Expect = 9.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 1066 PPPXVFF*KXPPPKKXXXFXPPPP 995
            PPP V+    PP KK   + PPPP
Sbjct: 384  PPPPVYI--PPPTKKVVVYTPPPP 405


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,569,891
Number of Sequences: 53049
Number of extensions: 286044
Number of successful extensions: 1446
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6209550816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)