Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_C01
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 35 0.30
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 35 0.30
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 35 0.30
AK126599-1|BAC86607.1| 123|Homo sapiens protein ( Homo sapiens ... 33 1.2
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 32 2.1
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 31 3.7
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein. 31 3.7
AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy ch... 31 4.8
AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen lon... 31 6.4
AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence si... 30 8.5
AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence si... 30 8.5
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 35.1 bits (77), Expect = 0.30
Identities = 33/113 (29%), Positives = 39/113 (34%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 PGPXHVTAGVPQGSALSPXTIQFVYQRYTPXLRRP-IWRSSPMTPPSTTRVGRRRCFIDD 258
P P A P + S T + P P + RS P T + RR
Sbjct: 511 PAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAP 570
Query: 259 FRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLXASITPPP 417
RP +PP SGS +S P S G PR S L A PPP
Sbjct: 571 ARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 622
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 35.1 bits (77), Expect = 0.30
Identities = 33/113 (29%), Positives = 39/113 (34%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 PGPXHVTAGVPQGSALSPXTIQFVYQRYTPXLRRP-IWRSSPMTPPSTTRVGRRRCFIDD 258
P P A P + S T + P P + RS P T + RR
Sbjct: 511 PAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAP 570
Query: 259 FRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLXASITPPP 417
RP +PP SGS +S P S G PR S L A PPP
Sbjct: 571 ARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 622
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 35.1 bits (77), Expect = 0.30
Identities = 33/113 (29%), Positives = 39/113 (34%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 PGPXHVTAGVPQGSALSPXTIQFVYQRYTPXLRRP-IWRSSPMTPPSTTRVGRRRCFIDD 258
P P A P + S T + P P + RS P T + RR
Sbjct: 431 PAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRTKRPAP 490
Query: 259 FRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLXASITPPP 417
RP +PP SGS +S P S G PR S L A PPP
Sbjct: 491 ARPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 542
>AK126599-1|BAC86607.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ44636 fis, clone BRACE2025452. ).
Length = 123
Score = 33.1 bits (72), Expect = 1.2
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 262 RPQLPPWD--SGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLXASITPPPPFAQSR 435
RP W SG GSG S K R SS G +L R + + PP P QSR
Sbjct: 20 RPLTTDWRILSGKGSGGSARAVSKL-RSSSSGNSLLRIRDLGVRKSQEEAAPPSPRPQSR 78
Query: 436 C---TTSPY 453
TT+PY
Sbjct: 79 AHAQTTNPY 87
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 32.3 bits (70), Expect = 2.1
Identities = 33/113 (29%), Positives = 39/113 (34%), Gaps = 1/113 (0%)
Frame = +1
Query: 82 PGPXHVTAGVPQGSALSPXTIQFVYQRYTPXLRRP-IWRSSPMTPPSTTRVGRRRCFIDD 258
P P A P + S T + P P + RS P T + RR
Sbjct: 448 PAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRT----- 502
Query: 259 FRPQLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTPR*ASLSRLXASITPPP 417
RP +PP SGS +S P S G PR S L A PPP
Sbjct: 503 -RPTMPP-PQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPTVPPP 553
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 289 GSGSGASTLTPRKAQRCSSKGVALRTPR*ASL---SRLXASITPPPPFAQSRCTTSPY-R 456
G G G + +PR+ R S+G + R S SR S P+++SR + SPY R
Sbjct: 111 GGGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYSRSRYSRSPYSR 170
Query: 457 GPRRSNIYG 483
R + YG
Sbjct: 171 SRYRESRYG 179
>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
Length = 4957
Score = 31.5 bits (68), Expect = 3.7
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +3
Query: 357 PPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAPKVKYLRRHPXX*DD-IPPPHQDGT 533
PP + PLP +P P P++ + P +P + R P D PP +D
Sbjct: 67 PPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSP 126
Query: 534 XSWPPSSLXRLYPXD 578
S PP P +
Sbjct: 127 ASPPPEDSLMSLPLE 141
>AF174114-1|AAD53860.1| 133|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 133
Score = 31.1 bits (67), Expect = 4.8
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 195 LFADDTAIYYSCRKKALLHRRLQTAATTM-GQWFRKW 302
L +DDTA+YY R + + H + T G WF W
Sbjct: 86 LRSDDTAVYYCARDQGIPHYDFWSGITPEDGDWFDPW 122
>AY484971-2|AAR83296.1| 1751|Homo sapiens type XVIII collagen long
variant protein.
Length = 1751
Score = 30.7 bits (66), Expect = 6.4
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +1
Query: 169 PXLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPRKA---QRC 339
P L RP W +P+T PS R + PPW S + L+P A Q+
Sbjct: 196 PSLGRP-W--APLTGPSVPPPSSGRASLSSLLGGAPPWGSLQDPDSQGLSPAAAAPSQQL 252
Query: 340 SSKGVALRTP 369
V LRTP
Sbjct: 253 QRPDVRLRTP 262
>AL691447-4|CAI13277.1| 655|Homo sapiens family with sequence
similarity 22, member F protein.
Length = 655
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 294 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTXRVNNPAPA 419
R WR+ +P S+ +L GR P L P R +P+P+
Sbjct: 549 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 590
>AL158827-6|CAH72568.1| 622|Homo sapiens family with sequence
similarity 22, member G protein.
Length = 622
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 294 RKWRIDINPTKSTAVLFKRGRPPNTTLSIPLPTXRVNNPAPA 419
R WR+ +P S+ +L GR P L P R +P+P+
Sbjct: 516 RPWRLSQSPVPSSGLLSPGGRGPQGALQSPSAQKRGLSPSPS 557
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,385,452
Number of Sequences: 237096
Number of extensions: 2513924
Number of successful extensions: 19018
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19010
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -