Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_C01
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 37 0.019
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.42
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 29 2.9
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 29 3.9
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 6.8
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/75 (28%), Positives = 29/75 (38%)
Frame = +3
Query: 327 STAVLFKRGRPPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAPKVKYLRRHPXX*DD 506
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 449 STGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 508
Query: 507 IPPPHQDGTXSWPPS 551
PPP + S PP+
Sbjct: 509 PPPPALEQEISGPPT 523
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 327 STAVLFKRGRPPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAP 464
ST + PP T P P R+ NP+P+ +P + P P P
Sbjct: 456 STGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPP 501
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 345 KRGRPPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAPKVKYLRRHPXX*DDIPPPHQ 524
K +PP + +PLP R + P V P + P P P + +PPP +
Sbjct: 233 KTTKPPQHLIILPLPPRRASPAPPRVIPHVIMQPPRP-RPPISTADLCTPAFQQLPPPRE 291
Query: 525 D 527
+
Sbjct: 292 E 292
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +3
Query: 354 RPPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAPK--VKYLRRHPXX*DDIPPPHQD 527
+PP + LP R P P V+P Y QP P P V + PPP D
Sbjct: 771 QPPFNPFDVALP--RAQQP-PIVQPTRTYQQPAPIPPPNLVNGFNPYNPSHSQCPPPPMD 827
Query: 528 GTXSWPPSSLXRLYPXDMY 584
+ + S+L + P +
Sbjct: 828 YSNNRRNSNLTPMPPSSTF 846
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +3
Query: 354 RPPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAPK--VKYLRRHPXX*DDIPPPHQD 527
+PP + LP R P P V+P Y QP P P V + PPP D
Sbjct: 771 QPPFNPFDVALP--RAQQP-PIVQPTRTYQQPAPIPPPNLVNGFNPYNPSHSQCPPPPMD 827
Query: 528 GTXSWPPSSLXRLYPXDMY 584
+ + S+L + P +
Sbjct: 828 YSNNRRNSNLTPMPPSSTF 846
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 14 LVLIIRDYLSNRSFXISSRGNAFPAPXTSQPESRKAPPSPRLLFSLYINDI 166
L++ + ++LSNRSF + + + A SP LLF +Y+NDI
Sbjct: 46 LLIWVNEFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSP-LLFGIYVNDI 95
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 403 LTRXVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 278
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/78 (24%), Positives = 31/78 (39%)
Frame = +3
Query: 321 TKSTAVLFKRGRPPNTTLSIPLPTXRVNNPAPAVRPITMYDQPIPWAPKVKYLRRHPXX* 500
++S + LF P + + + NNP PA +MY +P + P
Sbjct: 157 SESNSTLFDNNFSPRELSPLSVASEYCNNPQPA----SMYGHRSVQSPVPAFQDAPPRGY 212
Query: 501 DDIPPPHQDGTXSWPPSS 554
D++PPP + P S
Sbjct: 213 DNVPPPQSYKQPTHPSPS 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,540,146
Number of Sequences: 27780
Number of extensions: 342154
Number of successful extensions: 1123
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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