Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_B16
(983 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.027
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.062
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.082
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.19
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.33
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.58
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.58
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 0.76
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 0.76
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 3.1
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 9.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +2
Query: 752 PXPPTXXAPXXPPAHHTXXXLPPPNPPXQXXXPPPPGXPPXPA 880
P P P PPA PPP PP PPP PP PA
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 31.1 bits (67), Expect = 0.25
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPP 688
P PP P G PPP PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.33
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = +2
Query: 740 KRXXPXPPTXXAPXXPPAHHTXXXLPPPNPPXQXXXPPPPGXPPXPAXEXRXP 898
K P PP P PA +PPP P PPPP PP A P
Sbjct: 730 KSPPPPPPAVIVPTPAPA---PIPVPPPAPIMGGPPPPPP--PPGVAGAGPPP 777
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPP 688
P PP P PPP PPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPP 688
P PP G PPP PPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPP 688
P P P G PPP PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPP 768
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.027
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 752 PXPPTXXAPXXPPAHHTXXXLPPPNPPXQXXXPPPPGXPPXPAXEXRXP 898
P P P P + P PP PPPP PP PA P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 33.1 bits (72), Expect = 0.062
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 758 PPTXXAPXXPPAHHTXXXLPPPNPPXQXXXPPPPGXPPXPA 880
PP AP PP + PPP+ P PP PP PA
Sbjct: 1699 PPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPPPLPA 1737
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.062
Identities = 25/91 (27%), Positives = 28/91 (30%), Gaps = 3/91 (3%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXAGXXG-GXXXKRXXPXPPTXXAPXXPPAHHTXXX 811
PP P + PP P P A G K PP PP
Sbjct: 1150 PPVPAP---SGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Query: 812 LPPPNPPXQXXXPPPP--GXPPXPAXEXRXP 898
+PP PP P P G PP P + P
Sbjct: 1207 VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 30.3 bits (65), Expect = 0.44
Identities = 24/90 (26%), Positives = 24/90 (26%), Gaps = 2/90 (2%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXXPPAHHTXXXL 814
PP P PP P P A K PP PP
Sbjct: 1092 PPVPKPSVAA--PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAA 1149
Query: 815 PP-PNPPXQXXXPPPP-GXPPXPAXEXRXP 898
PP P P P P PP PA P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/90 (25%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXA-GXXGGXXXKRXXPXP-PTXXAPXXPPAHHTXX 808
PP P P P P A G P P P+ P PP T
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS-TAP 1217
Query: 809 XLPPPNPPXQXXXPPPPGXPPXPAXEXRXP 898
+P P+ P PP PA P
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/91 (24%), Positives = 23/91 (25%), Gaps = 3/91 (3%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXXPPAHHTXXXL 814
PP P + PP P P K PP PP
Sbjct: 1112 PPVPAP---SGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 815 PPPNPPXQXXXP---PPPGXPPXPAXEXRXP 898
PP P P P G PP P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 26.6 bits (56), Expect = 5.4
Identities = 20/82 (24%), Positives = 21/82 (25%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXXPPAHHTXXXL 814
PP P G PP P P K PP PP L
Sbjct: 1169 PPVPAPSSGI--PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 815 PPPNPPXQXXXPPPPGXPPXPA 880
PP P P P P+
Sbjct: 1227 PPVPVPTAKAPPVPAPSSEAPS 1248
Score = 25.8 bits (54), Expect = 9.4
Identities = 22/91 (24%), Positives = 24/91 (26%), Gaps = 3/91 (3%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXX-APXXPPAHHTXXX 811
PP P P P P + P P + AP PP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 812 LPP--PNPPXQXXXPPPPGXPPXPAXEXRXP 898
P P P P P G PP P P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.082
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = +2
Query: 668 PPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXXPPAHHTXXXLPPPNPPXQXXX 847
PPP PP G P PP A P PPP PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS--- 368
Query: 848 PPPPGXPPXPAXEXR 892
P G P P R
Sbjct: 369 APSTGRQPPPLSSSR 383
Score = 31.1 bits (67), Expect = 0.25
Identities = 26/99 (26%), Positives = 29/99 (29%), Gaps = 11/99 (11%)
Frame = +2
Query: 635 PPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXA----------PXX 784
PP PP PPP A G + P PT + P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 785 PPAHHTXXXLPPPNPPXQXXXPP-PPGXPPXPAXEXRXP 898
PP+ PP PP PP P G P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 29.5 bits (63), Expect = 0.76
Identities = 25/89 (28%), Positives = 27/89 (30%)
Frame = +2
Query: 605 GGXXRXYPXXPPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXX 784
G R PTP + PP PP A P PP+ AP
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA--------PAAPPLPPS--APIA 456
Query: 785 PPAHHTXXXLPPPNPPXQXXXPPPPGXPP 871
PP PP PP PP P P
Sbjct: 457 PPL-PAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/76 (26%), Positives = 24/76 (31%)
Frame = +2
Query: 671 PPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXXPPAHHTXXXLPPPNPPXQXXXP 850
PP PPP G P PP PP + +P P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP-------PPRSNAAGSIPLP--PQGRSAP 361
Query: 851 PPPGXPPXPAXEXRXP 898
PPP P+ + P
Sbjct: 362 PPPPPRSAPSTGRQPP 377
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 773 APXXPPAHHTXXXLPPPNPPXQXXXPPPPGXPPXPAXEXRXP 898
AP PP+ LP P P P PP PA P
Sbjct: 446 APPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.19
Identities = 25/67 (37%), Positives = 25/67 (37%)
Frame = -3
Query: 975 GIXRGGXRXGXXGGAXTG*LPGGXXXGXRXSXAGXGGXPGGGGXXXXSGGLGGGXXXXVW 796
G G G GG G PGG G G GG PGG G GG GGG
Sbjct: 212 GFGGEGHHHGGHGGFGGG--PGGFEGGP----GGFGGGPGGFGGG--LGGFGGGPGGFGG 263
Query: 795 WAGGXXG 775
GG G
Sbjct: 264 GPGGHGG 270
Score = 30.7 bits (66), Expect = 0.33
Identities = 27/78 (34%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Frame = -3
Query: 960 GXRXGXXGGAXTG*LPG-------GXXXGXRXSXAGXGGXPGG-GGXXXXSGGLGGGXXX 805
G G GG G PG G G G GG GG GG GG GGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 804 XVWWAGGXXGAXXVGGXG 751
GG G GG G
Sbjct: 247 FGGGLGGFGGGP--GGFG 262
Score = 29.5 bits (63), Expect = 0.76
Identities = 24/70 (34%), Positives = 24/70 (34%)
Frame = -3
Query: 960 GXRXGXXGGAXTG*LPGGXXXGXRXSXAGXGGXPGGGGXXXXSGGLGGGXXXXVWWAGGX 781
G G GG G GG G G GG G G GG GGG GG
Sbjct: 184 GHNGGGFGGFGGG--SGGPPPGP-GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 780 XGAXXVGGXG 751
G GG G
Sbjct: 241 GGGP--GGFG 248
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.33
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = +2
Query: 752 PXPPTXXAPXXPPAHHTXXXLPPP-----NPPXQXXXPPPPGXPPXP 877
P PP P PP LP P N Q PPPP P P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +2
Query: 752 PXPPTXXAPXXPPAHHTXXX-LPPPNP----PXQXXXPPPPGXPPXPA 880
P PPT + PP +PPP+P P PP P P PA
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/82 (23%), Positives = 23/82 (28%), Gaps = 4/82 (4%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPPXXXXXXXXAGXXGGXXXKRXXPXPPTXXAPXXPPAH--- 796
P P P PP P + + P P + P P A
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 797 -HTXXXLPPPNPPXQXXXPPPP 859
+ LP PP PPPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.58
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = -3
Query: 948 GXXGGAXTG*LPGGXXXGXRXSXAGXGGXPGGG--GXXXXSGGLGGGXXXXVWWAGGXXG 775
G GG+ G GG G G GG GGG G GG GG +GG G
Sbjct: 9 GGRGGSRGG--RGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Query: 774 A 772
A
Sbjct: 67 A 67
Score = 29.9 bits (64), Expect = 0.58
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -3
Query: 975 GIXRGGXRXGXXGGAXTG-*LPGGXXXGXRXSXAGXGGXPGG 853
G RGG R G GGA G GG G S G GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.5 bits (63), Expect = 0.76
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 912 GGXXXGXRXSXAGXGGXPGGGGXXXXSGGLGGGXXXXVWWAGGXXGAXXVGGXGXXR 742
GG G S G GG GG GG GGG GG G G G R
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGS------RGGSRGGFRGGSRGGFR 191
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 752 PXPPTXXAPXXPPAHHTXXXLPPPNPPXQXXXPPP-PGXPPXPA 880
P PP AP P + + + PP P P PG P PA
Sbjct: 504 PLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPA 547
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPP 688
P PP P + PPP PPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 626 PXXPPTPXXXXGTXPPPXPPP 688
P PP P G PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPP 26
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 815 PPPNPPXQXXXPPPPGXPPXP 877
PPP PP PP PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 5.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 815 PPPNPPXQXXXPPPPGXPPXP 877
PPP PP P P PP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Frame = +2
Query: 761 PTXXAPXXP--PAHHTXXXLPPPNPPXQXXXPPP--PGXPPXPAXEXRXP 898
P P P P+H LP PN P Q PP P P R P
Sbjct: 151 PVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLP 200
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 821 PNPPXQXXXPPPPGXPPXPAXEXRXP 898
P P Q PPPP PP PA P
Sbjct: 347 PTPQVQGSRPPPP--PPMPAPIYNVP 370
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,561,331
Number of Sequences: 5004
Number of extensions: 20284
Number of successful extensions: 193
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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