Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_B14
(922 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 36 0.054
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.094
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.094
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.094
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 33 0.38
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 32 0.50
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 32 0.50
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 32 0.50
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 32 0.50
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 32 0.50
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 32 0.66
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.88
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.88
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.88
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.88
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.88
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 30 2.0
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen prot... 30 2.7
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 30 2.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 3.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.5
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 6.2
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 6.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.2
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 6.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 28 8.2
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 8.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 8.2
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 8.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 8.2
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 8.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.2
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 28 8.2
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 35.9 bits (79), Expect = 0.041
Identities = 39/155 (25%), Positives = 42/155 (27%), Gaps = 6/155 (3%)
Frame = +1
Query: 385 AXGGLTX*CXPRXXXPXAD*SSPXX-GXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVX 561
A GG T C P P P G P PG A GA P P P
Sbjct: 99 AGGGCTGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAG 158
Query: 562 XXXXLX--GIXXXXXXXXXQNSPXXGRXP-PLXPGAPXXPPGSXXXXXXXXXXXXXSXXV 732
G SP P P P P P G+
Sbjct: 159 PPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGEST 218
Query: 733 XCXXRPPXPSXXP--SGPXPPXGXPGRAXPXAXGP 831
P P+ P +GP P G A P A GP
Sbjct: 219 YPEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGP 253
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 35.5 bits (78), Expect = 0.054
Identities = 38/160 (23%), Positives = 42/160 (26%), Gaps = 6/160 (3%)
Frame = +1
Query: 370 GVLRNAXGGLTX*CXPRXXXPXAD*SSPXX-GXPXXPGXGXXAXXGAPGXXXXSGXPRXX 546
G GG T C P P P G P PG + GA S P
Sbjct: 104 GEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQ 163
Query: 547 PRPVXXXXXLX--GIXXXXXXXXXQNSPXXGRXP-PLXPGAPXXPPGSXXXXXXXXXXXX 717
P P G SP P P P P PPG+
Sbjct: 164 PCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQ 223
Query: 718 XSXXVXCXXRPPXPSXXP--SGPXPPXGXPGRAXPXAXGP 831
P P+ P +GP P G G GP
Sbjct: 224 DGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGP 263
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +2
Query: 698 GGXXXXXXPGXXXAXXGLPXPPXXHPG---PXPPXXPPGGXSPG 820
GG PG G P PP PG P PP PPGG G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 746 GLPXPPXXHP--GPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
G P PP P G PP PPGG P G PP + P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +1
Query: 622 PXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXP-SGPXPPXGX 798
P G PP+ G P PP C PP P G PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Query: 799 PGRAXPXA 822
PG P A
Sbjct: 790 PGMFAPMA 797
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 7/47 (14%)
Frame = +2
Query: 698 GGXXXXXXPGXXXAXXGLPXPP-------XXHPGPXPPXXPPGGXSP 817
GG PG G P PP GP PP PPGG P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +2
Query: 752 PXPPXXHP---GPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
P PP P G PP PPGG P G PP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +2
Query: 695 AGGXXXXXXPGXXXAXXGLPXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXV 859
+GG P P PP G PP PPG +P + PP V
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKV 809
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +2
Query: 698 GGXXXXXXPGXXXAXXGLPXPPXXHPG---PXPPXXPPGGXSPG 820
GG PG G P PP PG P PP PPGG G
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 746 GLPXPPXXHP--GPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
G P PP P G PP PPGG P G PP + P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +1
Query: 622 PXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXP-SGPXPPXGX 798
P G PP+ G P PP C PP P G PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Query: 799 PGRAXPXA 822
PG P A
Sbjct: 790 PGMFAPMA 797
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 7/47 (14%)
Frame = +2
Query: 698 GGXXXXXXPGXXXAXXGLPXPP-------XXHPGPXPPXXPPGGXSP 817
GG PG G P PP GP PP PPGG P
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +2
Query: 752 PXPPXXHP---GPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
P PP P G PP PPGG P G PP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +2
Query: 695 AGGXXXXXXPGXXXAXXGLPXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXV 859
+GG P P PP G PP PPG +P + PP V
Sbjct: 755 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKV 809
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +2
Query: 698 GGXXXXXXPGXXXAXXGLPXPPXXHPG---PXPPXXPPGGXSPG 820
GG PG G P PP PG P PP PPGG G
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 746 GLPXPPXXHP--GPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
G P PP P G PP PPGG P G PP + P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +1
Query: 622 PXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXP-SGPXPPXGX 798
P G PP+ G P PP C PP P G PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Query: 799 PGRAXPXA 822
PG P A
Sbjct: 373 PGMFAPMA 380
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 7/47 (14%)
Frame = +2
Query: 698 GGXXXXXXPGXXXAXXGLPXPP-------XXHPGPXPPXXPPGGXSP 817
GG PG G P PP GP PP PPGG P
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +2
Query: 752 PXPPXXHP---GPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
P PP P G PP PPGG P G PP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +2
Query: 695 AGGXXXXXXPGXXXAXXGLPXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXV 859
+GG P P PP G PP PPG +P + PP V
Sbjct: 338 SGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKV 392
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +1
Query: 616 NSPXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRP-PXPSXXPSGPXPPX 792
N+P G P P P P G+ P P + P GP P
Sbjct: 200 NTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPPGPA 259
Query: 793 GXPGRAXPXAXGP 831
G PG A GP
Sbjct: 260 GNPGSAGASEPGP 272
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 736 CXXRPPXPSXXPSGPXPPXGXPGRAXPXAXGPXXGG 843
C PP P+ GP P G PG A P GG
Sbjct: 172 CFDCPPGPAGPAGGPG-PAGPPGPAGADGNTPSGGG 206
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 PPYSKIVVNLTLDLRHA-NXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPE 383
PP + V L+L H E + T+ +L + + L+W+ G W P +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTWIPLD 142
Query: 384 RLXRPDVVM 410
++ PD+++
Sbjct: 143 KIWVPDIIV 151
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 PPYSKIVVNLTLDLRHA-NXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPE 383
PP + V L+L H E + T+ +L + + L+W+ G W P +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTWIPLD 142
Query: 384 RLXRPDVVM 410
++ PD+++
Sbjct: 143 KIWVPDIIV 151
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 PPYSKIVVNLTLDLRHA-NXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPE 383
PP + V L+L H E + T+ +L + + L+W+ G W P +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTWIPLD 142
Query: 384 RLXRPDVVM 410
++ PD+++
Sbjct: 143 KIWVPDIIV 151
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 PPYSKIVVNLTLDLRHA-NXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPE 383
PP + V L+L H E + T+ +L + + L+W+ G W P +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTWIPLD 142
Query: 384 RLXRPDVVM 410
++ PD+++
Sbjct: 143 KIWVPDIIV 151
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 PPYSKIVVNLTLDLRHA-NXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPE 383
PP + V L+L H E + T+ +L + + L+W+ G W P +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTWIPLD 142
Query: 384 RLXRPDVVM 410
++ PD+++
Sbjct: 143 KIWVPDIIV 151
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +3
Query: 207 PPYSKIVVNLTLDLRHA-NXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPE 383
PP + V L+L H E + T+ +L + + L+W+ G W P +
Sbjct: 83 PPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPALFGGITKTWIPLD 142
Query: 384 RLXRPDVVM 410
++ PD+++
Sbjct: 143 KIWVPDIIV 151
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.66
Identities = 39/143 (27%), Positives = 40/143 (27%), Gaps = 2/143 (1%)
Frame = +1
Query: 409 CXPRXXXPXAD*SSPXXGXPXXPGX-GXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGI 585
C P P G P PG G G+PG P P P G
Sbjct: 137 CEPITPPPWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP-GEPGPKGPK----GP 191
Query: 586 XXXXXXXXXQNSPXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSX 765
Q S R PL PG P PPG P P
Sbjct: 192 PGAPGAPEHQESQECPRGEPLIPGEPG-PPGEAGPQGPPGSPGQPG----ADGSPGQPG- 245
Query: 766 XPSGPXPPXGXPGR-AXPXAXGP 831
P GP P G PG P A GP
Sbjct: 246 -PKGPNGPDGQPGADGNPGAPGP 267
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPP 850
P PP P PP PP G +PG G+ PP
Sbjct: 288 PPPPSSGMWPPPPP-PPPGRTPGPPGMPGMPPP 319
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
P PP PG PP P PG G+ PP PG
Sbjct: 308 PGPPGM-PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPP 850
P PP P PP PP G +PG G+ PP
Sbjct: 298 PPPPSSGMWPPPPP-PPPGRTPGPPGMPGMPPP 329
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
P PP PG PP P PG G+ PP PG
Sbjct: 318 PGPPGM-PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.88
Identities = 32/137 (23%), Positives = 38/137 (27%)
Frame = +1
Query: 448 SPXXGXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGIXXXXXXXXXQNSPX 627
SP G P G G + + G PR PR + SP
Sbjct: 353 SPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPP 412
Query: 628 XGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXPSGPXPPXGXPGR 807
G P P P GS + + P P+G PP G P
Sbjct: 413 TGSPPTGSPPTGRPPRGS-------PPTGSPPTGLPSRQKRQAPEDRPTG-SPPTGSPPT 464
Query: 808 AXPXAXGPXXGGSSXXR 858
P GP SS R
Sbjct: 465 GRPHRGGPGKSESSESR 481
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Frame = +1
Query: 622 PXXGRXPPLXPGAPXXPP---GSXXXXXXXXXXXXXSXX-VXCXXRPPXPSXXPSGPX-- 783
P G PP G+P PP GS S PP P P
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 343
Query: 784 PPXGXPGRAXPXAXGPXXGG 843
PP G P P P GG
Sbjct: 344 PPTGSPPTGSPPTGRPPRGG 363
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.88
Identities = 32/137 (23%), Positives = 38/137 (27%)
Frame = +1
Query: 448 SPXXGXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGIXXXXXXXXXQNSPX 627
SP G P G G + + G PR PR + SP
Sbjct: 374 SPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPP 433
Query: 628 XGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXPSGPXPPXGXPGR 807
G P P P GS + + P P+G PP G P
Sbjct: 434 TGSPPTGSPPTGRPPRGS-------PPTGSPPTGLPSRQKRQAPEDRPTG-SPPTGSPPT 485
Query: 808 AXPXAXGPXXGGSSXXR 858
P GP SS R
Sbjct: 486 GRPHRGGPGKSESSESR 502
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Frame = +1
Query: 622 PXXGRXPPLXPGAPXXPP---GSXXXXXXXXXXXXXSXX-VXCXXRPPXPSXXPSGPX-- 783
P G PP G+P PP GS S PP P P
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 364
Query: 784 PPXGXPGRAXPXAXGPXXGG 843
PP G P P P GG
Sbjct: 365 PPTGSPPTGSPPTGRPPRGG 384
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.88
Identities = 32/137 (23%), Positives = 38/137 (27%)
Frame = +1
Query: 448 SPXXGXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGIXXXXXXXXXQNSPX 627
SP G P G G + + G PR PR + SP
Sbjct: 359 SPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPP 418
Query: 628 XGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXPSGPXPPXGXPGR 807
G P P P GS + + P P+G PP G P
Sbjct: 419 TGSPPTGSPPTGRPPRGS-------PPTGSPPTGLPSRQKRQAPEDRPTG-SPPTGSPPT 470
Query: 808 AXPXAXGPXXGGSSXXR 858
P GP SS R
Sbjct: 471 GRPHRGGPGKSESSESR 487
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/80 (28%), Positives = 24/80 (30%), Gaps = 6/80 (7%)
Frame = +1
Query: 622 PXXGRXPPLXPGAPXXPP---GSXXXXXXXXXXXXXSXX-VXCXXRPPXPSXXPSGPX-- 783
P G PP G+P PP GS S PP P P
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERS 349
Query: 784 PPXGXPGRAXPXAXGPXXGG 843
PP G P P P GG
Sbjct: 350 PPTGSPPTGSPPTGRPPRGG 369
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 736 CXXRPPXPSXXPSGPXPPXGXPGR-AXPXAXGPXXGGSS 849
C P P+ P P PP G PG P A GP G S+
Sbjct: 108 CQCEPTKPTCPPGPPGPP-GQPGAPGVPGAPGPRGGDST 145
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +1
Query: 736 CXXRPPXPSXXPSGPXPPXGXPGR-AXPXAXGPXXGGSS 849
C P P+ P P PP G PG P A GP G S+
Sbjct: 92 CQCEPTKPTCPPGPPGPP-GQPGAPGVPGAPGPRGGDST 129
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +2
Query: 749 LPXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXVSPGAXXXR 883
LP P P P P PPG P + APP P R
Sbjct: 54 LPDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHR 98
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/113 (26%), Positives = 33/113 (29%), Gaps = 3/113 (2%)
Frame = +2
Query: 539 GXTPGRXXXXTXXPXSXXPXXXPXXKTPPSXG--GXXXSXXXXXXXXXXXXXXXAGGXXX 712
G PG P P + PPS G G +G
Sbjct: 179 GGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPS 238
Query: 713 XXXPGXXXAXXGLPXPPXXHPGP-XPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
PG G P P PGP P PP G PG + APP PG
Sbjct: 239 GGPPGPFDPS-GAP-PSGGPPGPFNPSGAPPSGGPPGPFD-PSGAPPSGGPPG 288
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/113 (26%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Frame = +2
Query: 539 GXTPGRXXXXTXXPXSXXPXXXPXXKTPPSXG--GXXXSXXXXXXXXXXXXXXXAGGXXX 712
G PG P P PPS G G +G
Sbjct: 254 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPS 313
Query: 713 XXXPGXXXAXXGLPXPPXXHPGP-XPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
PG G P P PGP P PP G PG + APP PG
Sbjct: 314 GGPPGPFNPS-GAP-PSGGPPGPFDPSGAPPSGGPPGPFN-PSGAPPSGGPPG 363
Score = 29.1 bits (62), Expect = 4.7
Identities = 30/113 (26%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Frame = +2
Query: 539 GXTPGRXXXXTXXPXSXXPXXXPXXKTPPSXG--GXXXSXXXXXXXXXXXXXXXAGGXXX 712
G PG P P PPS G G +G
Sbjct: 314 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPS 373
Query: 713 XXXPGXXXAXXGLPXPPXXHPGP-XPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
PG G P P PGP P PP G PG + APP PG
Sbjct: 374 GGPPGPFDPS-GAP-PSGGPPGPFDPSGAPPSGGPPGPFN-PSGAPPSGGPPG 423
Score = 28.7 bits (61), Expect = 6.2
Identities = 30/113 (26%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Frame = +2
Query: 539 GXTPGRXXXXTXXPXSXXPXXXPXXKTPPSXG--GXXXSXXXXXXXXXXXXXXXAGGXXX 712
G PG P P PPS G G +G
Sbjct: 164 GGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPS 223
Query: 713 XXXPGXXXAXXGLPXPPXXHPGP-XPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
PG G P P PGP P PP G PG + APP PG
Sbjct: 224 GGPPGPFNPS-GAP-PSGGPPGPFDPSGAPPSGGPPGPFN-PSGAPPSGGPPG 273
Score = 28.7 bits (61), Expect = 6.2
Identities = 30/113 (26%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Frame = +2
Query: 539 GXTPGRXXXXTXXPXSXXPXXXPXXKTPPSXG--GXXXSXXXXXXXXXXXXXXXAGGXXX 712
G PG P P PPS G G +G
Sbjct: 329 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPS 388
Query: 713 XXXPGXXXAXXGLPXPPXXHPGP-XPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
PG G P P PGP P PP G PG + APP PG
Sbjct: 389 GGPPGPFDPS-GAP-PSGGPPGPFNPSGAPPSGGPPGPFN-PSGAPPSGGPPG 438
Score = 28.7 bits (61), Expect = 6.2
Identities = 30/113 (26%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Frame = +2
Query: 539 GXTPGRXXXXTXXPXSXXPXXXPXXKTPPSXG--GXXXSXXXXXXXXXXXXXXXAGGXXX 712
G PG P P PPS G G +G
Sbjct: 404 GGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 463
Query: 713 XXXPGXXXAXXGLPXPPXXHPGP-XPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
PG G P P PGP P PP G PG + APP PG
Sbjct: 464 GGPPGPFNPS-GAP-PSGGPPGPFDPSGAPPSGGPPGPFN-PSGAPPSGGPPG 513
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/59 (27%), Positives = 19/59 (32%)
Frame = +1
Query: 640 PPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXPSGPXPPXGXPGRAXP 816
PP PG P P + + C + P P GP P G G A P
Sbjct: 105 PPGPPGEPGQPGSAGPPGPPGEDNTATFAPITCPPKDPSCVKCPEGPAGPPGPEGPAGP 163
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +1
Query: 736 CXXRPPXPSXXPSGPXPPXGXPG-RAXPXAXG--PXXGG 843
C PP P+ P GP PP G PG P G P GG
Sbjct: 159 CFDCPPGPAGPPGGPGPP-GPPGPEGAPGEDGNTPSRGG 196
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGGXS--PGXXGL 832
P PP +PG P PPGG PG G+
Sbjct: 448 PGPPGAYPGNGAPGGPPGGPPQFPGHPGM 476
>AF047652-2|AAC04393.3| 256|Caenorhabditis elegans Collagen protein
107, isoform a protein.
Length = 256
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = +1
Query: 616 NSPXXGRXPPLXPGAPXXP--PGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXPSGPXPP 789
N P PP PGAP PG S + P P+GP P
Sbjct: 88 NCPAGPAGPPGAPGAPGEDGTPGQAGKNGGNGIGIVNSADAGGCIKCPAGEPGPAGPDGP 147
Query: 790 XGXPGR-AXPXAXG 828
G PG P A G
Sbjct: 148 AGAPGADGQPGAPG 161
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = +1
Query: 616 NSPXXGRXPPLXPGAPXXP--PGSXXXXXXXXXXXXXSXXVXCXXRPPXPSXXPSGPXPP 789
N P PP PGAP PG S + P P+GP P
Sbjct: 88 NCPAGPAGPPGAPGAPGEDGTPGQAGKNGGNGIGIVNSADAGGCIKCPAGEPGPAGPDGP 147
Query: 790 XGXPGR-AXPXAXG 828
G PG P A G
Sbjct: 148 AGAPGADGQPGAPG 161
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 746 GLPXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXVSPG 868
G P P PGP P PPG PG G A P + PG
Sbjct: 221 GAPPGPPGPPGPPGPQGPPG--PPGKDGQPGKAGPPGL-PG 258
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGG 808
P PP GP PP PPGG
Sbjct: 580 PPPPPMLGGPPPPPPPPGG 598
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 722 PGXXXAXXGLPXPPXXHPGPXPPXXPPGGXS-PGXXGLXAXAPPXXVSPGA 871
PG P P PGP P PGG S PG G A P +PG+
Sbjct: 163 PGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAG-PAGPPGPDGNPGS 212
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 722 PGXXXAXXGLPXPPXXHPGPXPPXXPPGGXS-PGXXGLXAXAPPXXVSPGA 871
PG P P PGP P PGG S PG G A P +PG+
Sbjct: 163 PGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAG-PAGPPGPDGNPGS 212
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXX--PPGGXSPGXXGLXAXAPPXXVSPG 868
P PP PG PP PP G G G+ P PG
Sbjct: 780 PMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXXPPGG-XSPGXXGLXA-XAPPXXVSP 865
P P PGP P PPGG PG G PP P
Sbjct: 148 PAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGP 187
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 761 PXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXVSP 865
P PGP P PP PG G PP P
Sbjct: 240 PSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 722 PGXXXAXXGLPXPPXXHPGPXPPXXPPGGXSPGXXGLXAXAPP 850
P G P PP P P PP PP PG G PP
Sbjct: 240 PSDPPGPPGPPGPPTRRP-PGPPG-PPTRRPPGPPGPPTRRPP 280
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 752 PXPPXXHPGPXPPXX--PPGGXSPGXXGLXAXAPPXXVSPG 868
P PP PG PP PP G G G+ P PG
Sbjct: 780 PMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +2
Query: 722 PGXXXAXXGLPXPPXXHPGPXPPXXP--PGGXSPGXXGLXAXAPPXXVSPGA 871
P A G P P + GP PP P PG P G PP PGA
Sbjct: 394 PSAFGAPQG-PGGPGGY-GPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGA 443
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 758 PPXXHPGPXPPXXPPGGXSPGXXGLXAXAPPXXVSPGAXXXRAA 889
PP P P PP PP +P +P V G AA
Sbjct: 354 PPAPPPPPPPPPPPPPPQTPSASSSVTFSPTKSVDGGRSDLMAA 397
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/74 (27%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +1
Query: 616 NSPXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXR--PPXPSXXPSGPXPP 789
N+P G P P P PG+ + PP P P+GP P
Sbjct: 194 NTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPPGPPG-PAGPPGP 252
Query: 790 XGXPGRAXPXAXGP 831
G G+A GP
Sbjct: 253 AGNAGQAGYAQPGP 266
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 34/137 (24%), Positives = 38/137 (27%), Gaps = 1/137 (0%)
Frame = +1
Query: 409 CXPRXXXPXAD*SSPXXGXPXXPGX-GXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGI 585
C P P G P PG G G PG P P P G
Sbjct: 139 CEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAP-GSPGPRGPPGPA-GE 196
Query: 586 XXXXXXXXXQNSPXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSX 765
+P PL PGAP P S + PP P
Sbjct: 197 AGAPGPAGEPGTPAISE--PLTPGAPGEPGDSGPPGPPGPPGAPGNDG---PPGPPGPKG 251
Query: 766 XPSGPXPPXGXPGRAXP 816
P GP P G G++ P
Sbjct: 252 AP-GPDGPPGVDGQSGP 267
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 35/153 (22%), Positives = 38/153 (24%), Gaps = 6/153 (3%)
Frame = +1
Query: 391 GGLTX*CXPRXXXPXAD*SSPXX-GXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXX 567
GG C P P P G P PG GA P P P
Sbjct: 96 GGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 568 XXLX--GIXXXXXXXXXQNSPXXGRXP-PLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXC 738
G SP P P P P P G+
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
Query: 739 XXRPPXPSXXP--SGPXPPXGXPGRAXPXAXGP 831
P P+ P +GP G PG P GP
Sbjct: 216 GPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 5/39 (12%)
Frame = +2
Query: 749 LPXPPXXHPGPXPPXXPP----GGXSPGXXGL-XAXAPP 850
+P PP PGP P P GG PG L APP
Sbjct: 154 VPEPPIPAPGPVAPPTPSGPLFGGVEPGAGALTPGVAPP 192
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 35/153 (22%), Positives = 38/153 (24%), Gaps = 6/153 (3%)
Frame = +1
Query: 391 GGLTX*CXPRXXXPXAD*SSPXX-GXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXX 567
GG C P P P G P PG GA P P P
Sbjct: 96 GGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 568 XXLX--GIXXXXXXXXXQNSPXXGRXP-PLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXC 738
G SP P P P P P G+
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
Query: 739 XXRPPXPSXXP--SGPXPPXGXPGRAXPXAXGP 831
P P+ P +GP G PG P GP
Sbjct: 216 GPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 34/137 (24%), Positives = 38/137 (27%), Gaps = 1/137 (0%)
Frame = +1
Query: 409 CXPRXXXPXAD*SSPXXGXPXXPGX-GXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGI 585
C P P G P PG G G PG P P P G
Sbjct: 134 CEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAP-GSPGPRGPPGPA-GE 191
Query: 586 XXXXXXXXXQNSPXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSX 765
+P PL PGAP P S + PP P
Sbjct: 192 AGAPGPAGEPGTPAISE--PLTPGAPGEPGDSGPPGPPGPPGAPGNDG---PPGPPGPKG 246
Query: 766 XPSGPXPPXGXPGRAXP 816
P GP P G G++ P
Sbjct: 247 AP-GPDGPPGADGQSGP 262
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 35/153 (22%), Positives = 38/153 (24%), Gaps = 6/153 (3%)
Frame = +1
Query: 391 GGLTX*CXPRXXXPXAD*SSPXX-GXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXX 567
GG C P P P G P PG GA P P P
Sbjct: 96 GGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 568 XXLX--GIXXXXXXXXXQNSPXXGRXP-PLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXC 738
G SP P P P P P G+
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
Query: 739 XXRPPXPSXXP--SGPXPPXGXPGRAXPXAXGP 831
P P+ P +GP G PG P GP
Sbjct: 216 GPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 34/137 (24%), Positives = 38/137 (27%), Gaps = 1/137 (0%)
Frame = +1
Query: 409 CXPRXXXPXAD*SSPXXGXPXXPGX-GXXAXXGAPGXXXXSGXPRXXPRPVXXXXXLXGI 585
C P P G P PG G G PG P P P G
Sbjct: 134 CEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAP-GSPGPRGPPGPA-GE 191
Query: 586 XXXXXXXXXQNSPXXGRXPPLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXCXXRPPXPSX 765
+P PL PGAP P S + PP P
Sbjct: 192 AGAPGPAGEPGTPAISE--PLTPGAPGEPGDSGPPGPPGPPGAPGNDG---PPGPPGPKG 246
Query: 766 XPSGPXPPXGXPGRAXP 816
P GP P G G++ P
Sbjct: 247 AP-GPDGPPGADGQSGP 262
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.2
Identities = 35/153 (22%), Positives = 38/153 (24%), Gaps = 6/153 (3%)
Frame = +1
Query: 391 GGLTX*CXPRXXXPXAD*SSPXX-GXPXXPGXGXXAXXGAPGXXXXSGXPRXXPRPVXXX 567
GG C P P P G P PG GA P P P
Sbjct: 96 GGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 568 XXLX--GIXXXXXXXXXQNSPXXGRXP-PLXPGAPXXPPGSXXXXXXXXXXXXXSXXVXC 738
G SP P P P P P G+
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQG 215
Query: 739 XXRPPXPSXXP--SGPXPPXGXPGRAXPXAXGP 831
P P+ P +GP G PG P GP
Sbjct: 216 GPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGP 248
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 5/72 (6%)
Frame = +1
Query: 631 GRXPPLXPGAPXXPPGS-XXXXXXXXXXXXXSXXVXCXXRP--PXPSXXPSGPXPP--XG 795
G PP P P PPG+ + P P P+ P P PP G
Sbjct: 208 GSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDG 267
Query: 796 XPGRAXPXAXGP 831
G A P GP
Sbjct: 268 SGGAAQPGPPGP 279
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +3
Query: 222 IVVNLTLDLRHANXRESESTVRILAXLXXXGIGKRLSWNAGXMGLXPXGWCPPERLXRPD 401
I L LD + + E + + + L + RLSWN G P E L PD
Sbjct: 33 IEFKLRLD-QIVDVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPD 91
Query: 402 VVMXXTA 422
+++ A
Sbjct: 92 IILYNNA 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,534,163
Number of Sequences: 27780
Number of extensions: 301157
Number of successful extensions: 2157
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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