Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_B07
(857 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07194-1|CAA30172.1| 567|Drosophila melanogaster mature acetylc... 37 0.041
AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic ac... 36 0.054
AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA... 36 0.071
Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic acet... 36 0.094
Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic acet... 36 0.094
AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA... 36 0.094
X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subuni... 35 0.12
X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic acet... 35 0.12
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 35 0.12
AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p pro... 35 0.12
AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic ac... 35 0.12
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 35 0.12
AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-P... 35 0.12
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 35 0.12
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 35 0.12
AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB... 35 0.12
AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA... 35 0.12
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 34 0.22
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 34 0.22
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 34 0.22
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 34 0.22
X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR... 33 0.38
X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D. m... 33 0.50
M20316-1|AAA28311.1| 521|Drosophila melanogaster protein ( D.me... 33 0.50
AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic ac... 33 0.50
AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic ac... 33 0.50
AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA... 33 0.50
AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-P... 33 0.50
AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-P... 33 0.50
AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-P... 33 0.50
X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta su... 33 0.66
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 33 0.66
AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p pro... 33 0.66
AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p pro... 33 0.66
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 33 0.66
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 33 0.66
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 33 0.66
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 33 0.66
AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB... 33 0.66
AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA... 33 0.66
AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF... 33 0.66
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 33 0.66
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 33 0.66
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 33 0.66
X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein. 29 8.2
AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA... 29 8.2
>X07194-1|CAA30172.1| 567|Drosophila melanogaster mature
acetylcholine receptoralpha-like subunit protein.
Length = 567
Score = 36.7 bits (81), Expect = 0.041
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 99 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 272
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 273 WLVSSERLWRPDVV 314
V SE +W PD+V
Sbjct: 99 LHVPSEHIWHPDIV 112
>AJ272159-1|CAB77445.1| 568|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha 4 subunit protein.
Length = 568
Score = 36.3 bits (80), Expect = 0.054
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 129 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 302
K+ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 67 KVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVHMLHVPSDHIWR 124
Query: 303 PDVV 314
PD+V
Sbjct: 125 PDIV 128
>AE014297-3553|AAF56301.2| 567|Drosophila melanogaster CG5610-PA
protein.
Length = 567
Score = 35.9 bits (79), Expect = 0.071
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 99 RTIGSLPPXSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 272
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 41 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 98
Query: 273 WLVSSERLWRPDVV 314
V SE +W PD+V
Sbjct: 99 LHVPSEHIWLPDIV 112
>Y15594-1|CAA75689.1| 776|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 776
Score = 35.5 bits (78), Expect = 0.094
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ +W D +L W E+G L V S+ +WRPD+V
Sbjct: 59 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIV 94
>Y15593-1|CAA75688.1| 795|Drosophila melanogaster nicotinic
acetylcholine receptoralpha 3 subunit protein.
Length = 795
Score = 35.5 bits (78), Expect = 0.094
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ +W D +L W E+G L V S+ +WRPD+V
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIV 113
>AE014298-1164|AAF46361.2| 783|Drosophila melanogaster CG2302-PA
protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.094
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ +W D +L W E+G L V S+ +WRPD+V
Sbjct: 78 VEQSWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIV 113
>X53583-1|CAA37652.1| 576|Drosophila melanogaster alpha-2-subunit
nicotinic acetylcholinereceptor precursor protein.
Length = 576
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 132 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 299
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 300 RPDVV 314
PD+V
Sbjct: 128 LPDIV 132
>X52274-1|CAA36517.1| 576|Drosophila melanogaster nicotinic
acetylcholine receptoralpha subunit protein.
Length = 576
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 132 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 299
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 300 RPDVV 314
PD+V
Sbjct: 128 LPDIV 132
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
L++ W D L WN+ E+G L + RLW+PDV+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVL 148
>AY058446-1|AAL13675.1| 576|Drosophila melanogaster GH22843p
protein.
Length = 576
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 132 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 299
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 300 RPDVV 314
PD+V
Sbjct: 128 LPDIV 132
>AY036614-1|AAK67257.1| 219|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 subunit protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
L++ W D L WN+ E+G L + RLW+PDV+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVL 148
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
L++ W D L WN+ E+G L + RLW+PDV+
Sbjct: 91 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVL 126
>AE014298-2837|AAS65410.1| 219|Drosophila melanogaster CG32538-PC,
isoform C protein.
Length = 219
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
L++ W D L WN+ E+G L + RLW+PDV+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVL 148
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
L++ W D L WN+ E+G L + RLW+PDV+
Sbjct: 113 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVL 148
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 35.1 bits (77), Expect = 0.12
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
L++ W D L WN+ E+G L + RLW+PDV+
Sbjct: 94 LKLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVL 129
>AE014297-3556|AAF56303.1| 576|Drosophila melanogaster CG6844-PB,
isoform B protein.
Length = 576
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 132 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 299
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 300 RPDVV 314
PD+V
Sbjct: 128 LPDIV 132
>AE014297-3555|AAF56302.2| 576|Drosophila melanogaster CG6844-PA,
isoform A protein.
Length = 576
Score = 35.1 bits (77), Expect = 0.12
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 132 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 299
++V L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 70 VLVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFKWDPSEYGGVTELYVPSEHIW 127
Query: 300 RPDVV 314
PD+V
Sbjct: 128 LPDIV 132
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 96 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 272
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 273 WLVSSERLWRPDVV 314
++ +LW+PDV+
Sbjct: 104 LRITPNKLWKPDVL 117
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 96 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 272
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 273 WLVSSERLWRPDVV 314
++ +LW+PDV+
Sbjct: 104 LRITPNKLWKPDVL 117
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 96 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 272
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 273 WLVSSERLWRPDVV 314
++ +LW+PDV+
Sbjct: 104 LRITPNKLWKPDVL 117
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 34.3 bits (75), Expect = 0.22
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 96 QRTIGSLPPXSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCST 272
+R + + ++ LTL + ++ E + A L + W D L WN E+ G
Sbjct: 45 ERPVANESEPLEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLRWNETEYGGVKD 103
Query: 273 WLVSSERLWRPDVV 314
++ +LW+PDV+
Sbjct: 104 LRITPNKLWKPDVL 117
>X04016-3|CAA27641.1| 521|Drosophila melanogaster nicotinic AChR
protein.
Length = 521
Score = 33.5 bits (73), Expect = 0.38
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+V
Sbjct: 66 NVNEKNQVMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIV 115
>X07956-1|CAA30778.1| 521|Drosophila melanogaster protein ( D.
melanogaster ardgene exons 1-2 (fragment Xba-IN2 of
gARD5) for nicotinicacetylcholine receptor. ).
Length = 521
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+V
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIV 115
>M20316-1|AAA28311.1| 521|Drosophila melanogaster protein (
D.melanogaster acetylcholinereceptor-related protein
mRNA, complete cds. ).
Length = 521
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+V
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIV 115
>AY036613-1|AAK67256.1| 482|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 482
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L++ W D L WN ++ G + R+W+PDV+
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVL 400
>AF272778-1|AAM13390.1| 807|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha5 subunit protein.
Length = 807
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L++ W D L WN ++ G + R+W+PDV+
Sbjct: 364 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVL 399
>AE014296-848|AAF47900.1| 521|Drosophila melanogaster CG11348-PA,
isoform A protein.
Length = 521
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
N+ E ++ L++ W D +L W+ ++ G + +++W+PD+V
Sbjct: 66 NVNEKNQIMKSNVWLRLVWYDYQLQWDEADYGGIGVLRLPPDKVWKPDIV 115
>AE014134-2462|AAF53374.3| 570|Drosophila melanogaster CG32975-PA,
isoform A protein.
Length = 570
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L++ W D L WN ++ G + R+W+PDV+
Sbjct: 316 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVL 351
>AE014134-2461|AAS64703.1| 808|Drosophila melanogaster CG32975-PB,
isoform B protein.
Length = 808
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L++ W D L WN ++ G + R+W+PDV+
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVL 400
>AE014134-2460|AAS64702.1| 786|Drosophila melanogaster CG32975-PC,
isoform C protein.
Length = 786
Score = 33.1 bits (72), Expect = 0.50
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L++ W D L WN ++ G + R+W+PDV+
Sbjct: 365 LKLEWNDMNLRWNTSDYGGVKDLRIPPHRIWKPDVL 400
>X55676-1|CAA39211.1| 500|Drosophila melanogaster second beta
subunit of nicotinicacetylcholine receptor protein.
Length = 500
Score = 32.7 bits (71), Expect = 0.66
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ W D +L W+ E+G L V SE +W PD+V
Sbjct: 63 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIV 98
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 96 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 131
>AY089498-1|AAL90236.1| 238|Drosophila melanogaster GH09870p
protein.
Length = 238
Score = 32.7 bits (71), Expect = 0.66
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ W D +L W+ E+G L V SE +W PD+V
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIV 117
>AY060225-1|AAL25264.1| 121|Drosophila melanogaster GH01410p
protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 132
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>AE014297-3558|AAN13998.1| 304|Drosophila melanogaster CG6798-PB,
isoform B protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.66
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ W D +L W+ E+G L V SE +W PD+V
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIV 117
>AE014297-3557|AAF56304.1| 519|Drosophila melanogaster CG6798-PA,
isoform A protein.
Length = 519
Score = 32.7 bits (71), Expect = 0.66
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVV 314
++ W D +L W+ E+G L V SE +W PD+V
Sbjct: 82 VKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIV 117
>AE014134-1707|ABC65885.1| 121|Drosophila melanogaster CG4128-PF,
isoform F protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 97 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 132
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 32.7 bits (71), Expect = 0.66
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 210 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 314
L + W D L WN E+ G ++ +LW+PDV+
Sbjct: 82 LSLEWNDYNLRWNETEYGGVKDLRITPNKLWKPDVL 117
>X78349-1|CAA55144.1| 686|Drosophila melanogaster Grd protein.
Length = 686
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 171 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPD 308
I E + T + + +W+DKRL++ + + + R+W+PD
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPD 192
>AE014296-2969|AAF49298.2| 686|Drosophila melanogaster CG7446-PA
protein.
Length = 686
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 171 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPD 308
I E + T + + +W+DKRL++ + + + R+W+PD
Sbjct: 147 ISEVDMTYSMDCYFRQSWVDKRLAFEGAQDTLALSVSMLARIWKPD 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,773,597
Number of Sequences: 53049
Number of extensions: 459326
Number of successful extensions: 1152
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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