Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP09_FL5_B02
(813 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 35 8e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.010
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.029
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.029
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.029
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.039
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.051
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.051
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.051
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.068
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.068
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.83
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 23 4.4
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 5.9
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 3e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 108 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 272
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 273 MNWIDKRLSWNA 308
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 35.1 bits (77), Expect = 8e-04
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 114 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 281
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 282 IDKRLSWNAGR 314
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.010
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +3
Query: 57 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 218
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 219 H-ANIRESESTVRIQADLQMNWIDKRLSWN 305
A I + + +Q + W+D+RL +N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFN 98
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 450
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 450
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
+ RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.029
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.029
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.029
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 319 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 450
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.039
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.1 bits (62), Expect = 0.051
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 346 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 453
+++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 186 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.051
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +1
Query: 319 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 450
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.051
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 313 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 450
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.068
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 450
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.068
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWI 453
V R+WRPD +L N A + VS+ G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 337 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 453
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 26.2 bits (55), Expect = 0.36
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 225 NIRESESTVRIQADLQMNWIDKRLSWNAGRVG 320
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.83
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 54 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 158
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.6 bits (46), Expect = 4.4
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +1
Query: 463 DLXTPXSMAVXXLGPTTC 516
D+ +P ++ +GPTTC
Sbjct: 356 DISSPDAVEYGIIGPTTC 373
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 346 ERLWRPDVVLLN 381
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,461
Number of Sequences: 438
Number of extensions: 3667
Number of successful extensions: 37
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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