Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP09_FL5_B01
         (799 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   207   8e-54
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    48   6e-06
Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   6.7  
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  207 bits (505), Expect = 8e-54
 Identities = 94/140 (67%), Positives = 116/140 (82%)
 Frame = +1

Query: 157 DEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPH 336
           +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+RKA++ HL  NP+LEKLLPH
Sbjct: 22  EEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPH 81

Query: 337 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPXKTSFFQAL 516
           I  NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  V +P  NTG+GP KTSFFQAL
Sbjct: 82  IVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQAL 141

Query: 517 SIPTKISKGTIEIINDVHXL 576
            IPTKI++GTIEI+NDVH +
Sbjct: 142 QIPTKIARGTIEILNDVHLI 161



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +3

Query: 93  MGREDKATWKSNYFVKIIQLLRRVPK 170
           M RED++TWK+NYF K+++L    PK
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPK 26


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
 Frame = +1

Query: 151 SCDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEK 324
           S D+Y   FI    N+ S +   IR   + +S    GKN ++  A+     +  A  L K
Sbjct: 33  SVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHK 92

Query: 325 LLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPXKTS 501
               +KG  G +FT     EV  +  E   +  AR G +A  +VV+P    +        
Sbjct: 93  ASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEP 152

Query: 502 FFQALSIPTKISKGTIEI 555
             + L +PTK+ KG I +
Sbjct: 153 QLRKLGLPTKLDKGVITL 170


>Z81117-4|CAB03319.1|  249|Caenorhabditis elegans Hypothetical
           protein T06E6.10 protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 13/56 (23%), Positives = 21/56 (37%)
 Frame = +2

Query: 242 PVSCSWEKTQ*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRT 409
           P  C+  +   C      T   ++P+  C H +  T   CSP +        C+ T
Sbjct: 109 PAGCAMVRPSGCMDSPTMTGCELKPT--CIHVNACTTTKCSPGKKCALHTVQCFTT 162


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 458 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 348
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 48  LVLKFHRSPYATLSRMGREDKATWKSNYFVK 140
           L+ K   S ++ +SR+ +EDK +  SN+++K
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,054,748
Number of Sequences: 27780
Number of extensions: 324127
Number of successful extensions: 935
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)