Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_P18
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 113 2e-25
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 105 3e-23
12_02_1033 - 25552157-25552732,25553050-25553505,25553608-255536... 30 2.7
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 29 6.2
07_01_0761 + 5849466-5850677 29 6.2
06_03_0915 - 25929433-25930893 29 6.2
12_01_0582 - 4752576-4752786,4752955-4753037,4753324-4753530,475... 28 8.1
08_01_0332 + 2971361-2971439,2971596-2971783,2971985-2972062,297... 28 8.1
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 113 bits (271), Expect = 2e-25
Identities = 72/179 (40%), Positives = 96/179 (53%), Gaps = 8/179 (4%)
Frame = -2
Query: 629 KGKGYKGVTSRWHTKKLPRKTHQGS*ESCLHWSLASF*GVVHCSSCWSE-RLSSPY*NEQ 453
KGKGY+GV +RW +LPRKTH+G + V C W R+S
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRK-------------VACIGAWHPARVSYTVARAG 271
Query: 452 ENLSYWTKESTKRMAKLLKTMHLLSMICLRNPLHRWEVSPI-------MVK*TTTL**XK 294
+N + E K++ K+ K+ C +++P+ +VK + K
Sbjct: 272 QNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLM--IK 329
Query: 293 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
GCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K F G LK
Sbjct: 330 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQRFFGKLK 388
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = -3
Query: 697 EKPIPVDSVFAP-R*ND*LHWCXPRAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHP 521
EK IPVD+VF D + + + V+ G R P + +GLRKVACIGAWHP
Sbjct: 203 EKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW-GVTR-LPRKTHRGLRKVACIGAWHP 260
Query: 520 SRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 261 ARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
Score = 60.1 bits (139), Expect = 2e-09
Identities = 54/169 (31%), Positives = 80/169 (47%), Gaps = 5/169 (2%)
Frame = -1
Query: 771 AHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMIDCIGVXQGQRIQRCHFSLA 592
AH+MEI GTI + + G + + + + + +DEMID IGV +G+ + +
Sbjct: 179 AHLMEIQINGGTIADKVDYGYKFFEKEIPVDAV-FQKDEMIDIIGVTKGKGYEGV-VTRW 236
Query: 591 HKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITVLK*TRKSIVLDQGIHKKD 412
P T R L K+ + G R V TV + + ++KK
Sbjct: 237 GVTRLPRKTHRGLRKVACI--GAWHPAR---------VSYTVARAGQNGYHHRTEMNKKV 285
Query: 411 GKVIKNN-----ASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
K+ K+ A TE+D +EK ITPMGGFPHYG V D++M +G G
Sbjct: 286 YKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVG 334
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 105 bits (253), Expect = 3e-23
Identities = 68/171 (39%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Frame = -2
Query: 629 KGKGYKGVTSRWHTKKLPRKTHQGS*ESCLHWSLASF*GVVHCSSCWSE-RLSSPY*NEQ 453
KGKGY+GV +RW +LPRKTH+G + V C W R+S
Sbjct: 225 KGKGYEGVVTRWGVTRLPRKTHRGLRK-------------VACIGAWHPARVSYTVARAG 271
Query: 452 ENLSYWTKESTKRMAKLLKTMHLLSMICLRNPLHRWEVSPI-------MVK*TTTL**XK 294
+N + E K++ K+ K+ C +++P+ +VK + K
Sbjct: 272 QNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLM--IK 329
Query: 293 GCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADK 141
GCC+GPKKR++TLR+SL T R ALE+I LKFIDTSSKFGHGRFQT +K
Sbjct: 330 GCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEK 380
Score = 92.7 bits (220), Expect = 3e-19
Identities = 50/89 (56%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = -3
Query: 697 EKPIPVDSVFAP-R*ND*LHWCXPRAKDTKVSLLVGTQRSYPVRHTKGLRKVACIGAWHP 521
EK IPVD+VF D + + + V+ G R P + +GLRKVACIGAWHP
Sbjct: 203 EKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRW-GVTR-LPRKTHRGLRKVACIGAWHP 260
Query: 520 SRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 261 ARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
Score = 61.3 bits (142), Expect = 9e-10
Identities = 60/188 (31%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Frame = -1
Query: 825 LRVIAHXXXXXXXXXXXK-AHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMI 649
+RVIAH K AH+MEI GTI + + G + + + + + +DEMI
Sbjct: 160 VRVIAHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAV-FQKDEMI 218
Query: 648 DCIGVXQGQRIQRCHFSLAHKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIIT 469
D IGV +G+ + + P T R L K+ + G R V T
Sbjct: 219 DIIGVTKGKGYEGV-VTRWGVTRLPRKTHRGLRKVACI--GAWHPAR---------VSYT 266
Query: 468 VLK*TRKSIVLDQGIHKKDGKVIKNN-----ASTEYDLSEKSITPMGGFPHYGEVNNDFV 304
V + + ++KK K+ K+ A TE+D +EK ITPMGGFPHYG V D++
Sbjct: 267 VARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYL 326
Query: 303 MXQGLLHG 280
M +G G
Sbjct: 327 MIKGCCVG 334
>12_02_1033 -
25552157-25552732,25553050-25553505,25553608-25553659,
25553758-25553831,25553968-25554017,25554106-25554187,
25554265-25554314,25554405-25554447,25554544-25554624,
25554723-25554768,25554860-25554906,25554998-25555063,
25555334-25555400,25555528-25555613
Length = 591
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 181 PSSVMVDSRRRLTRLHSWVHSRRIVFAKKLRLPQPQRGCCAALSVVRE 38
PS V+ +RRR+ R +S + R + F+K P P+R ++ ++E
Sbjct: 292 PSDVVDSARRRMARRNSLGNERTVTFSK----PSPERNSVSSTRSIKE 335
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 166 VDSRRRLTRLHSWVHSRRIVFAKKLRLPQPQRGCCAALSVVRE 38
V S RL RL W + + LRL P+R C A+ VV E
Sbjct: 11 VSSWPRLPRLPPWPCASHAQRRRVLRLLPPRRRCAGAVRVVAE 53
>07_01_0761 + 5849466-5850677
Length = 403
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -3
Query: 610 VSLLVGTQRSYPVRHTKGLRKVACI--GAWHPSRVSFTVARAGQKGYHHR 467
V+LLVG R V V+ + G HP SFT+ RA H+
Sbjct: 129 VALLVGNDRRLRVLDAAASAAVSLVPDGEHHPINCSFTLGRAASSSGEHK 178
>06_03_0915 - 25929433-25930893
Length = 486
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 334 GETSHRCNGFLRQIILSRCIVFNNFAILFVDSLVQYDRFSCSFQY 468
GE H+ G I+ C++ NN +L V ++ D S S ++
Sbjct: 138 GEVVHKALGRPASIVAQMCVIINNAGVLIVYLIIIGDVMSGSLKH 182
>12_01_0582 -
4752576-4752786,4752955-4753037,4753324-4753530,
4755128-4755207,4756853-4756998,4757088-4757719
Length = 452
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 347 IGVMDFSDRSYSVDALFLITLPSFLWIPWSNTIDFLVHFSTVMI 478
+ +DF + ++ +L LPS W W + + + VH ++ I
Sbjct: 392 LSAIDFLKHAADLNTRWLKRLPSNFWATWVHPLTYKVHVKSLWI 435
>08_01_0332 +
2971361-2971439,2971596-2971783,2971985-2972062,
2972354-2972425,2972513-2972631,2972858-2972942,
2973096-2973185,2973268-2973369,2973448-2973624,
2973874-2973954,2974511-2974582,2974662-2974756,
2974831-2974919,2975016-2975078,2975161-2975204,
2975554-2975685
Length = 521
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 1 FFFFFFALSNVYFHGLHLRL 60
FFFFFF +N+ FH L+ L
Sbjct: 307 FFFFFFFCANILFHHLNYLL 326
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,280,870
Number of Sequences: 37544
Number of extensions: 508733
Number of successful extensions: 1279
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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