Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_P18
(846 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 129 4e-30
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 129 4e-30
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 129 4e-30
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 129 4e-30
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 122 5e-28
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 129 bits (312), Expect = 4e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -2
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
Query: 116 KDRIREEAAATTTPA 72
KDR++EEAAATT A
Sbjct: 394 KDRLKEEAAATTAAA 408
Score = 122 bits (294), Expect = 6e-28
Identities = 76/185 (41%), Positives = 104/185 (56%)
Frame = -1
Query: 825 LRVIAHXXXXXXXXXXXKAHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMID 646
+RVIAH KAH+MEI G+I + + +E+ + + +S + QDEMID
Sbjct: 160 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMID 218
Query: 645 CIGVXQGQRIQRCHFSLAHKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITV 466
C+GV +G+ + S H + P T + L K+ + + +K
Sbjct: 219 CVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHR 277
Query: 465 LK*TRKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLL 286
+ +K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G
Sbjct: 278 TEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCC 337
Query: 285 HGT*K 271
G+ K
Sbjct: 338 IGSKK 342
Score = 103 bits (246), Expect = 4e-22
Identities = 56/94 (59%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -3
Query: 709 REHXEKPIPVDSVFAPR*ND*LHWCX--PRAKDTKVSLLVGTQRSYPVRHTKGLRKVACI 536
REH EKPI V +VF D + C + K K + P + KGLRKVACI
Sbjct: 198 REHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Query: 535 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
GAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 255 GAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 129 bits (312), Expect = 4e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -2
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 380
Query: 116 KDRIREEAAATTTPA 72
KDR++EEAAATT A
Sbjct: 381 KDRLKEEAAATTAAA 395
Score = 122 bits (294), Expect = 6e-28
Identities = 76/185 (41%), Positives = 104/185 (56%)
Frame = -1
Query: 825 LRVIAHXXXXXXXXXXXKAHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMID 646
+RVIAH KAH+MEI G+I + + +E+ + + +S + QDEMID
Sbjct: 147 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMID 205
Query: 645 CIGVXQGQRIQRCHFSLAHKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITV 466
C+GV +G+ + S H + P T + L K+ + + +K
Sbjct: 206 CVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHR 264
Query: 465 LK*TRKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLL 286
+ +K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G
Sbjct: 265 TEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCC 324
Query: 285 HGT*K 271
G+ K
Sbjct: 325 IGSKK 329
Score = 103 bits (246), Expect = 4e-22
Identities = 56/94 (59%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -3
Query: 709 REHXEKPIPVDSVFAPR*ND*LHWCX--PRAKDTKVSLLVGTQRSYPVRHTKGLRKVACI 536
REH EKPI V +VF D + C + K K + P + KGLRKVACI
Sbjct: 185 REHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 241
Query: 535 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
GAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 242 GAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 275
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 129 bits (312), Expect = 4e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -2
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 321 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 380
Query: 116 KDRIREEAAATTTPA 72
KDR++EEAAATT A
Sbjct: 381 KDRLKEEAAATTAAA 395
Score = 122 bits (294), Expect = 6e-28
Identities = 76/185 (41%), Positives = 104/185 (56%)
Frame = -1
Query: 825 LRVIAHXXXXXXXXXXXKAHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMID 646
+RVIAH KAH+MEI G+I + + +E+ + + +S + QDEMID
Sbjct: 147 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMID 205
Query: 645 CIGVXQGQRIQRCHFSLAHKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITV 466
C+GV +G+ + S H + P T + L K+ + + +K
Sbjct: 206 CVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHR 264
Query: 465 LK*TRKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLL 286
+ +K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G
Sbjct: 265 TEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCC 324
Query: 285 HGT*K 271
G+ K
Sbjct: 325 IGSKK 329
Score = 103 bits (246), Expect = 4e-22
Identities = 56/94 (59%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -3
Query: 709 REHXEKPIPVDSVFAPR*ND*LHWCX--PRAKDTKVSLLVGTQRSYPVRHTKGLRKVACI 536
REH EKPI V +VF D + C + K K + P + KGLRKVACI
Sbjct: 185 REHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 241
Query: 535 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
GAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 242 GAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 275
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 129 bits (312), Expect = 4e-30
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = -2
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 334 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 393
Query: 116 KDRIREEAAATTTPA 72
KDR++EEAAATT A
Sbjct: 394 KDRLKEEAAATTAAA 408
Score = 122 bits (294), Expect = 6e-28
Identities = 76/185 (41%), Positives = 104/185 (56%)
Frame = -1
Query: 825 LRVIAHXXXXXXXXXXXKAHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMID 646
+RVIAH KAH+MEI G+I + + +E+ + + +S + QDEMID
Sbjct: 160 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMID 218
Query: 645 CIGVXQGQRIQRCHFSLAHKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITV 466
C+GV +G+ + S H + P T + L K+ + + +K
Sbjct: 219 CVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHR 277
Query: 465 LK*TRKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLL 286
+ +K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G
Sbjct: 278 TEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCC 337
Query: 285 HGT*K 271
G+ K
Sbjct: 338 IGSKK 342
Score = 103 bits (246), Expect = 4e-22
Identities = 56/94 (59%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -3
Query: 709 REHXEKPIPVDSVFAPR*ND*LHWCX--PRAKDTKVSLLVGTQRSYPVRHTKGLRKVACI 536
REH EKPI V +VF D + C + K K + P + KGLRKVACI
Sbjct: 198 REHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 254
Query: 535 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
GAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 255 GAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 288
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 122 bits (295), Expect = 5e-28
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = -2
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTPADKAAFMGTLK 117
KGCC+G KKRIITLRKSL HTKR+ALE+I LKFIDTSSK GHGRFQTPADK AFMG LK
Sbjct: 345 KGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLK 404
Query: 116 KDRIREEAA 90
KDR++EEAA
Sbjct: 405 KDRLKEEAA 413
Score = 122 bits (294), Expect = 6e-28
Identities = 76/185 (41%), Positives = 104/185 (56%)
Frame = -1
Query: 825 LRVIAHXXXXXXXXXXXKAHIMEIXXXRGTIXXQSEMGQENXWRNLSLSILCLPQDEMID 646
+RVIAH KAH+MEI G+I + + +E+ + + +S + QDEMID
Sbjct: 171 IRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNV-FGQDEMID 229
Query: 645 CIGVXQGQRIQRCHFSLAHKEATP*DTPRVLGKLPALELGILLGCRSL*LVLVRKVIITV 466
C+GV +G+ + S H + P T + L K+ + + +K
Sbjct: 230 CVGVTKGKGFKGVT-SRWHTKKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHR 288
Query: 465 LK*TRKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLL 286
+ +K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVM +G
Sbjct: 289 TEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCC 348
Query: 285 HGT*K 271
G+ K
Sbjct: 349 IGSKK 353
Score = 103 bits (246), Expect = 4e-22
Identities = 56/94 (59%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = -3
Query: 709 REHXEKPIPVDSVFAPR*ND*LHWCX--PRAKDTKVSLLVGTQRSYPVRHTKGLRKVACI 536
REH EKPI V +VF D + C + K K + P + KGLRKVACI
Sbjct: 209 REHLEKPIQVSNVFG---QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACI 265
Query: 535 GAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
GAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG
Sbjct: 266 GAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIG 299
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,168,367
Number of Sequences: 53049
Number of extensions: 837400
Number of successful extensions: 2148
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2132
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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