Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_P06
         (965 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    32   0.70 
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    32   0.70 
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    31   0.93 
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    31   0.93 
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    31   1.2  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -1

Query: 512 MFKVXRSDXXVX---SFGXSVQGIIMXXASYXGFYDTA 408
           + K+ +SD  +     F  SVQGII+  A+Y G +DTA
Sbjct: 164 LIKIVKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTA 201


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -1

Query: 512 MFKVXRSDXXVX---SFGXSVQGIIMXXASYXGFYDTA 408
           + K+ +SD  +     F  SVQGII+  A+Y G +DTA
Sbjct: 164 LIKIVKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTA 201


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -1

Query: 512 MFKVXRSDXXVX---SFGXSVQGIIMXXASYXGFYDTA 408
           + K+ +SD  +     F  SVQGII+  A+Y G +DTA
Sbjct: 177 LVKIAKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTA 214


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -1

Query: 512 MFKVXRSDXXVX---SFGXSVQGIIMXXASYXGFYDTA 408
           + K+ +SD  +     F  SVQGII+  A+Y G +DTA
Sbjct: 177 LVKIAKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTA 214


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = -1

Query: 506 KVXRSDXXVX---SFGXSVQGIIMXXASYXGFYDTA 408
           K+ +SD  +     F  SVQGII+  A+Y G +DTA
Sbjct: 166 KIVKSDGPIGLYRGFFVSVQGIIIYRAAYFGMFDTA 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,155,733
Number of Sequences: 27780
Number of extensions: 118800
Number of successful extensions: 150
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)