Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_O18
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 285 5e-78
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 281 1e-76
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 116 3e-27
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 62 9e-11
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 36 0.005
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.12
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 31 0.15
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 31 0.20
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.27
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.35
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.35
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.61
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.81
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 1.4
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 27 2.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 3.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.3
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.3
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 26 5.7
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 5.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 7.6
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 285 bits (699), Expect = 5e-78
Identities = 125/156 (80%), Positives = 140/156 (89%)
Frame = -1
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ +IK++RTIQ
Sbjct: 287 HESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRGDVIPRDVQAAVTSIKSRRTIQ 346
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FVDWCPTGFK+GI Y+PP VPG +AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KR
Sbjct: 347 FVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAEAWSRLDHKFDLMYSKR 406
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
AFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 407 AFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 442
Score = 78.6 bits (185), Expect = 1e-15
Identities = 41/69 (59%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Frame = -3
Query: 798 NFDIGXPTYTNL---IVSLDRLFPRSLXFEXDGALNWDLTEFQTNLVPYPRIHFPLVTYA 628
N DI PTY NL I + SL F G+LN DL EFQTNLVPYPRIHFPLVTY+
Sbjct: 220 NLDIERPTYENLNRLIAQVVSSITASLRFA--GSLNVDLNEFQTNLVPYPRIHFPLVTYS 277
Query: 627 PVISAEKAY 601
P++SA KA+
Sbjct: 278 PIVSAAKAF 286
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 281 bits (688), Expect = 1e-76
Identities = 124/156 (79%), Positives = 138/156 (88%)
Frame = -1
Query: 599 HEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQ 420
HE SV EITN CFEP NQMVKCDPR G+YMA C+LYRGDV+P+DV AA+ TIK KRTIQ
Sbjct: 283 HESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIPRDVQAAVTTIKAKRTIQ 342
Query: 419 FVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKR 240
FVDWCPTGFK+GI +PP + G ++AKV RAVCMLSNTT+IAEAW+RLDHKFDLMY+KR
Sbjct: 343 FVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSRLDHKFDLMYSKR 402
Query: 239 AFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 132
AFVHWYVGEGMEEGEFSEAREDLAALE+DYEEVG D
Sbjct: 403 AFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQD 438
Score = 80.6 bits (190), Expect = 3e-16
Identities = 42/69 (60%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Frame = -3
Query: 798 NFDIGXPTYTNL---IVSLDRLFPRSLXFEXDGALNWDLTEFQTNLVPYPRIHFPLVTYA 628
N DI P+Y NL I + SL FE G+LN DL EFQTNLVPYPRIHFPLVTYA
Sbjct: 216 NLDIERPSYENLNRLIAQVVSSITASLRFE--GSLNVDLAEFQTNLVPYPRIHFPLVTYA 273
Query: 627 PVISAEKAY 601
P++SA KA+
Sbjct: 274 PIVSAAKAF 282
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 116 bits (280), Expect = 3e-27
Identities = 59/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Frame = -1
Query: 596 EQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQF 417
+ +SV E+T F+ N MV DPRHG+Y+ L+RG V K+V+ I +++TK + F
Sbjct: 282 QAVSVPELTQQMFDANNMMVAADPRHGRYLTVAALFRGKVSMKEVDEQIRSVQTKNSAYF 341
Query: 416 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRA 237
V+W P + PP DL + + + N+T+I E + RL +F M+ ++A
Sbjct: 342 VEWIPDNVLKAVCSVPPK-----DL---KMSATFIGNSTSIQEIFRRLGDQFSAMFRRKA 393
Query: 236 FVHWYVGEGMEEGEFSEAR---EDLAALEKDYEEVGMD 132
F+HWY GEGM+E EF+EA DL + + Y+E G+D
Sbjct: 394 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAGID 431
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -3
Query: 723 FEXDGALNWDLTEFQTNLVPYPRIHFPLVTYAPV 622
F G LN DL + N+VP+PR+HF +V +AP+
Sbjct: 240 FRFPGELNSDLRKLAVNMVPFPRLHFFMVGFAPL 273
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 62.1 bits (144), Expect = 9e-11
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Frame = -1
Query: 689 PSSRLTWCLTPVSTSHWSRTRQSSLPRRPTHEQLSVAEITNACFEPANQMVKCDP-RHGK 513
PS R + LT + + ++ R+ T V ++ P NQMV +P +
Sbjct: 262 PSPRCHFLLTSYTPFTNQQVEEAKAIRKTT-----VLDVMRRLLLPKNQMVSVNPSKKSC 316
Query: 512 YMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 333
+++ + +G+ P DV+ ++ I+ +R F+ W P +V ++ + P + ++ +
Sbjct: 317 FISILDIIQGEADPADVHKSLLRIRERRYASFIPWGPASIQVALSKKSPYIKTNHRVSGL 376
Query: 332 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAAL 162
ML+N T+IA + R ++D + + AF+ Y E + E EF +R+ +A L
Sbjct: 377 -----MLANHTSIASLFKRTLDQYDRLRKRNAFLEQYKKEAIFEDDLNEFDSSRDVVADL 431
Query: 161 EKDYE 147
+YE
Sbjct: 432 INEYE 436
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 711 GALNWDLTEFQTNLVPYPRIHFPLVTYAP 625
G +N DL +L+P PR HF L +Y P
Sbjct: 247 GYMNNDLVSIIASLIPSPRCHFLLTSYTP 275
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 39.5 bits (88), Expect = 6e-04
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 4/174 (2%)
Frame = -2
Query: 595 NSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNS 416
NS PLP + T ++ +IP ++ V TV + + P P+ S S
Sbjct: 274 NSSPLPTTSTSCTTS-----TSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTS 328
Query: 415 STGVQPVSRSVST-TSHPPWCPEATWPRFNVP---SACCPTPPPSLKLGLALTTSSTSCT 248
S+ + S S +T TS PP T VP ++ TPPP T+SS +
Sbjct: 329 SSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLS 388
Query: 247 PSVLSCTGTSVRVWRRESSPKPVRTWLPSKRITKKSAWTPLKARVREPKSTKPV 86
S SCT TS + +S PV +P + T P ++ PV
Sbjct: 389 TST-SCT-TSTSIPPTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPV 440
Score = 30.7 bits (66), Expect = 0.27
Identities = 42/141 (29%), Positives = 57/141 (40%), Gaps = 15/141 (10%)
Frame = -2
Query: 595 NSFPLPRSQTHASS----PPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLP---SK 437
+S PLP + T ++ PPT +++ + + T TS P T S S
Sbjct: 104 SSSPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSN 163
Query: 436 P----SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKL----G 281
P S +ST + P S S ++ P P T P + S P PP S
Sbjct: 164 PLPTTSTSCTTSTSIPPTGGSSSLST--PITP--TVPPTSTSSTSIPIPPTSTSSTDTNS 219
Query: 280 LALTTSSTSCTPSVLSCTGTS 218
L T+STSCT S TG S
Sbjct: 220 SPLPTTSTSCTTSTSIPTGGS 240
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 36.3 bits (80), Expect = 0.005
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 7/133 (5%)
Frame = -2
Query: 475 YPRM*TRPSLP----SKPSVLSN-SSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 311
YP P+LP SKP V+ N V P +R + P+ ++P P+ C
Sbjct: 166 YPVSLPSPNLPHQPISKPPVIPNLPKLQVHP-NRLPHPIHNHPYSSPTSYPPPLCPATYC 224
Query: 310 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSP--KPVRTWLPSKRITKKSA 137
P+ PP L A+ SS S ++ + T + + P + WLP + T
Sbjct: 225 PSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINNHTAVPLSPTLAVWLPMTQPT---- 280
Query: 136 WTPLKARVREPKS 98
+ P A V +P S
Sbjct: 281 FQPPSANVYQPAS 293
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 31.9 bits (69), Expect = 0.12
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -2
Query: 325 PSACCPTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPS--KRI 152
P+ + P + G+ TS TS T S S++ S+P P W P+
Sbjct: 134 PATSSFSDPKAFSAGVPKFTSDTSSTVSSTPSLNHSLQNSMPPSTPTPPPVWAPTIVSSA 193
Query: 151 TKKSAWTPLKARVREPKSTK 92
S+ TP+ V EP+ TK
Sbjct: 194 LGTSSKTPVYVVVDEPRFTK 213
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.5 bits (68), Expect = 0.15
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = -2
Query: 442 SKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTS 263
S P+ S + PVS + T + PP A R N A P + + A T S
Sbjct: 1001 SMPAAKSKPAPMANPVSTAQQTQNRPP--APAMQARPNTTQAAAPVTSTTTTIKQATTVS 1058
Query: 262 STSCTPSVLSCTGTSVRVWRRESSP 188
++ PS ++ +S + S+P
Sbjct: 1059 ASKPAPSTVTSAASSPSNISKPSAP 1083
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -2
Query: 433 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTS 254
S+L +S+ P+S + STT+ T ++ TP S+ + T +STS
Sbjct: 280 SLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTS 339
Query: 253 CTP--SVLSCTGTS 218
TP SV S T TS
Sbjct: 340 STPLSSVNSTTATS 353
Score = 27.9 bits (59), Expect = 1.9
Identities = 34/127 (26%), Positives = 50/127 (39%)
Frame = -2
Query: 595 NSFPLPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNS 416
N+ L S T +S+P + + AS+ T+ T S S + + +
Sbjct: 277 NTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSANSTTAT 336
Query: 415 STGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVL 236
ST P+S STT+ T ++ TP S+ A + SST T S
Sbjct: 337 STSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLT-SAN 395
Query: 235 SCTGTSV 215
S T TSV
Sbjct: 396 STTSTSV 402
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.27
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -2
Query: 487 VVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCP 353
VV P + RP++P P LS V PV+ V + PP P
Sbjct: 552 VVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAP 596
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.35
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 433 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 257
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 256 SCTPSVLS 233
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.35
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -2
Query: 433 SVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGL-ALTTSST 257
S+L ST V + T P AT R+N + P P P G+ A+ T++T
Sbjct: 1581 SLLGEEST-VSTMYGVKPTLPETPKPAIATHSRYNASFSSSPPPQPGNSSGMSAMNTNTT 1639
Query: 256 SCTPSVLS 233
S TP LS
Sbjct: 1640 STTPVSLS 1647
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.61
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 445 PSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLG 281
P+ P + S P + S TS PP + P + P + P+ PPSL +G
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP-SAPPSLPPSAPPSLPMG 442
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = -2
Query: 451 SLPSKPSVLSNSSTGVQPVSRSVSTT-SHPPWCPEATWPRFNVPSACCPTPPPSLKLGLA 275
S P+ P + + S T PV S S PP P + P + + P PPS +
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 274 LTTSSTSCTP 245
L + P
Sbjct: 459 LPAGMPAAPP 468
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.81
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 7/139 (5%)
Frame = -2
Query: 685 VPD*LGALPPYPLPTGHVRASHLCREG----LPMNSFPLPRSQTHASS--PPTRW*NA-I 527
VP PP PLP+ + +P ++ P+P+S + A S PP ++ I
Sbjct: 1014 VPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEI 1073
Query: 526 PVMASTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEA 347
P + + A + P + +PS+ + P + S V PV P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPV-PKPSVAAPP--VPKPSVAVPPVPAPSGAPPVPK--PSV 1128
Query: 346 TWPRFNVPSACCPTPPPSL 290
P VPS P P PS+
Sbjct: 1129 AAPPVPVPSGAPPVPKPSV 1147
Score = 28.7 bits (61), Expect = 1.1
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = -2
Query: 481 TSYPRM*TRPSLP-SKPSVLSNSS--TGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACC 311
TS P PS P SKP S ++ V PV + +S+ + P P A P VPS
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPK-LSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 310 PTPPPSLKLGLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPV 179
P P P+ + ++S P + + + S PV
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV 1085
Score = 26.6 bits (56), Expect = 4.3
Identities = 23/73 (31%), Positives = 28/73 (38%)
Frame = -2
Query: 685 VPD*LGALPPYPLPTGHVRASHLCREGLPMNSFPLPRSQTHASSPPTRW*NAIPVMASTW 506
VP LPP P+PT +P S P T SS P+ NA P S+
Sbjct: 1219 VPTPSAGLPPVPVPTAKA-------PPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSS 1271
Query: 505 LAVCCTVVTSYPR 467
+A TS R
Sbjct: 1272 MASAAPARTSVSR 1284
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1
Query: 575 ITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAI 450
+ ACFEP N C H K C L + KD N ++
Sbjct: 361 LCGACFEPINAKCYCG-LHSKTYPCSSLPSPSISKKDENGSV 401
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 683 SRLTWCLTPVSTSHWSRTRQSSLPRRPTHEQLSVA 579
SR T CLTPV H+ + + + P H L +A
Sbjct: 216 SRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIA 250
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 447 SDGRVHILGYDVTTVQHTASHVLAMTGIAFHHLVGGLEACVCDLGNGK 590
S G +LGY ++ A++V+A + + HL+ G D K
Sbjct: 407 SAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESK 454
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.3
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 442 SKPSVLSNSSTGVQP--VSRSVSTTSHPPWC--PEATWPRFNVPSACCPTPPP 296
S P+ S++GV VS S S PP P A P ++PS P PPP
Sbjct: 141 SAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 391 RSVSTTSHPPWCPEATWPRFNVPSACCPTPPPSLKLGLALTTSSTSCTPSVLS 233
++ S T+ P P ++ FN PSA P P++ + +T TPS S
Sbjct: 453 KAPSATTDKPSPPVSSIFSFNAPSAASTKPSPAVSSTFSFNAPTT--TPSATS 503
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 780 PTYTNL-IVSLDRLFPRSLXFEXDGALNWDLTEFQTNLVPYP 658
PT T + IV + +FP S G + F++NLVPYP
Sbjct: 493 PTETAVSIVHVPLMFPCSDQTSSRGRAPIAILSFKSNLVPYP 534
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2
Query: 451 SLPSKPSV---LSNSSTGVQPVSRSVSTTSHP 365
+LP KPS+ +++S V+P S STTS+P
Sbjct: 5 TLPPKPSISPSIASSFPTVKPFSSQNSTTSNP 36
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 7.6
Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Frame = -2
Query: 634 VRASHLCREGLPMNSFP--LPRSQTHASSPPTRW*NAIPVMASTWLAVCCTVVTSYPRM* 461
++AS G P N P +P + HA +P P M + A P
Sbjct: 1428 LKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQP---KAPGMVTNAPAPSSAPAPPAPVSQ 1484
Query: 460 TRPSLPSKPSVLSNSSTGVQPVSRSVSTTSHPPWCPEATWPRFNVPSACCPTP 302
P++P+ P S QP S T+ P + +VPS P P
Sbjct: 1485 LPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAP 1537
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,384,059
Number of Sequences: 5004
Number of extensions: 77629
Number of successful extensions: 312
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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