Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_O09
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 116 3e-26
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 78 9e-15
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 77 2e-14
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 39 0.004
05_04_0141 - 18364065-18364176,18364722-18364948,18365183-183653... 36 0.027
01_06_0888 + 32738275-32739567 31 1.3
01_05_0473 - 22549178-22549532,22549612-22550576 29 3.1
09_02_0375 + 8119112-8119215,8119497-8119572,8119882-8119934,812... 29 4.1
05_03_0601 - 16043516-16044037 29 4.1
09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135 29 5.4
01_05_0111 - 18230195-18230239,18230541-18230615,18231379-182315... 29 5.4
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 28 7.1
08_02_1047 - 23927822-23928112,23928736-23928981,23929119-239293... 28 9.4
07_03_0190 + 14893243-14893582,14893684-14893808 28 9.4
06_01_0917 - 7077934-7080339 28 9.4
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053... 28 9.4
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 116 bits (278), Expect = 3e-26
Identities = 58/132 (43%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Frame = -1
Query: 491 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 312
+ME+ V +KS F + + VK+P P T+ GKAKY AS +++VWKI++
Sbjct: 305 RMEINVKVKSVFGAKMFALGVVVKVPVPKQTAKTSFQTTSGKAKYNASIDSLVWKIRKFP 364
Query: 311 GMKETQLSAEIELLET-DTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHD 138
G E +SAE+EL+ T KK W RPPI M F+VP F SG +VR+LKV+E S ++
Sbjct: 365 GQTEATMSAEVELISTMGEKKSWNRPPIQMEFQVPMFTASGLRVRFLKVWEK----SGYN 420
Query: 137 VIKWVRYIGRSG 102
++WVRYI R+G
Sbjct: 421 TVEWVRYITRAG 432
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/31 (61%), Positives = 28/31 (90%)
Frame = -3
Query: 582 GEFELMRYRTTKDISLPFRVIPLVREVGRTQ 490
GEFELM+YR T+ ++LPFRV+P ++E+GRT+
Sbjct: 275 GEFELMKYRITEGVNLPFRVLPTIKELGRTR 305
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = -2
Query: 670 VVIDDCQFHQCVKLSKFETEHSISFIPPD 584
+ +DD FHQCV L++F +E ++SF+PPD
Sbjct: 246 IELDDVTFHQCVNLTRFNSEKTVSFVPPD 274
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 77.8 bits (183), Expect = 9e-15
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
Frame = -1
Query: 491 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 312
++++ V +S FK +E+++P P +++ + G A Y +A+VWKIK
Sbjct: 269 RIQITVKTRSQFKERSTATNVEIEVPVPEDSTNPNIRTSMGSAAYAPERDAMVWKIKSFP 328
Query: 311 GMKETQLSAEIEL--LETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDH 141
G KE AE L + ++ + PI + FE+P F SG +VRYLK+ E S +
Sbjct: 329 GGKEYMCRAEFSLPSITSEDGMPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGY 384
Query: 140 DVIKWVRYIGRSG 102
+ WVRYI +G
Sbjct: 385 QALPWVRYITMAG 397
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -2
Query: 664 IDDCQFHQCVKLSKFETEHSISFIPPD 584
+DD +FHQCV+L++FE + +ISFIPPD
Sbjct: 212 LDDIKFHQCVRLARFENDRTISFIPPD 238
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 76.6 bits (180), Expect = 2e-14
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Frame = -1
Query: 491 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 312
++E+ V +S FK +E+++P P + + + G A Y +A+VWK+K
Sbjct: 294 RIELMVKARSQFKERSTATNVEIEVPVPSDATNPNIRTSMGSAAYAPERDAMVWKVKSFP 353
Query: 311 GMKETQLSAEIEL--LETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDH 141
G K+ AE L + + + PI + FE+P F SG +VRYLK+ E S +
Sbjct: 354 GGKDYMCRAEFSLPSITAEEAAPEKKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGY 409
Query: 140 DVIKWVRYIGRSG 102
+ WVRYI +G
Sbjct: 410 QALPWVRYITMAG 422
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = -2
Query: 664 IDDCQFHQCVKLSKFETEHSISFIPPD 584
+DD +FHQCV+L++FE + +ISFIPPD
Sbjct: 237 LDDIKFHQCVRLARFENDRTISFIPPD 263
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 39.1 bits (87), Expect = 0.004
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 670 VVIDDCQFHQCVKLSKFETEHSISFIPPD 584
V++DDC FH+ V L F+ + ++ IPPD
Sbjct: 254 VILDDCNFHESVHLDSFDIDRTLHLIPPD 282
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 582 GEFELMRYRTTKDISLPFRVIPLVREVG 499
GEF +M YR T++ PFRV L+ E G
Sbjct: 283 GEFAVMNYRITQEFKPPFRVTALIEEAG 310
>05_04_0141 -
18364065-18364176,18364722-18364948,18365183-18365390,
18365497-18365706,18366078-18366180,18366214-18366325,
18367061-18367204,18367835-18367936,18368081-18368186,
18368301-18368335
Length = 452
Score = 36.3 bits (80), Expect = 0.027
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 667 VIDDCQFHQCVKLSKFETEHSISFIPPD 584
+I+D +FH CV+ +E+ +SF+PPD
Sbjct: 235 IINDVRFHPCVRFRPWESNQILSFVPPD 262
>01_06_0888 + 32738275-32739567
Length = 430
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 336 DSVLRGFILRFPLQANQLHPAGVQRSWNLHFDLL 437
D+V+R R P N++H AGV R W H + L
Sbjct: 12 DAVVREIANRLPCVYNRVHLAGVCRPWREHLERL 45
>01_05_0473 - 22549178-22549532,22549612-22550576
Length = 439
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -3
Query: 594 YHRTGEFELMRYRTTKDISLPFRVIPLV--REVGRTQDGSQGCAEE*LQALPAR-TEDRS 424
+ R E EL+R + P RV+P++ REVG+ C EE + +R +S
Sbjct: 147 FGRHEEKELIREFLLQPCDSPLRVLPIIRPREVGKNTLIEHVCNEESVHEHFSRVVRFKS 206
Query: 423 EDSNSAEHQ 397
+D N+ E+Q
Sbjct: 207 DDLNNEENQ 215
>09_02_0375 +
8119112-8119215,8119497-8119572,8119882-8119934,
8121443-8121951,8122127-8122287,8122416-8122493,
8122647-8122728,8122826-8123052
Length = 429
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -1
Query: 635 EAEQVRN*TFHL-LHTTGPESLSS*GIAPQKTYLCRFASSRSCGRWAAPKMEVK 477
E+E+VRN L LH T PE L + + + +++C AA M+VK
Sbjct: 278 ESERVRNVQGFLNLHATNPEKLRKLVVMSDRLWKATLHHAKTCDFRAAEMMQVK 331
>05_03_0601 - 16043516-16044037
Length = 173
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = -1
Query: 212 PFAPSGFKVRYLK-----VFEPKLNYSDHDVIKWVRYIGRSGLXRDQVLSDAGSNGFVNR 48
PF P+G+ Y + EP + + +W R +G S RD+ L D + G ++
Sbjct: 16 PFVPAGWSATYWRCGGVAAVEPAVAEVEDFSPEWWRLVGSSPAFRDRWLRDYSALGLLDD 75
Query: 47 NE 42
N+
Sbjct: 76 ND 77
>09_02_0139 - 4875234-4876210,4877532-4877932,4878056-4878135
Length = 485
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 221 TPWRWAGASTSSWCRSRGAQSR 286
TP A STS WCRSRG R
Sbjct: 377 TPISSAQQSTSIWCRSRGGNRR 398
>01_05_0111 -
18230195-18230239,18230541-18230615,18231379-18231566,
18232416-18232739,18232926-18233115
Length = 273
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 357 ILRFPLQANQLHPAGVQRSWNLHFDLLSEQGGLEVTLQHNLDFHLGCGPPP 509
+L F + ++ W FD+++ +T ++N D GCG PP
Sbjct: 131 VLMFNSRVKLFGHGKLRSKWEGPFDIINTSSHGAITFRNNSDQGKGCGIPP 181
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 397 LVFSGVGIFTSIFCPSREGLKLLFST---TLTSILGAAHLPHERDDAKRQRYVFCGAIPH 567
L F + ++ +R+ L LL ++ T TS+ AA H RQ CG P
Sbjct: 42 LAFGPEALLHTVMAKARKELGLLPASGPGTPTSVAAAAAAAHSPFMLSRQNSGRCGTAPS 101
Query: 568 ELKLSGP 588
L +S P
Sbjct: 102 PLSVSSP 108
>08_02_1047 -
23927822-23928112,23928736-23928981,23929119-23929395,
23929522-23929799,23931147-23931572
Length = 505
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 396 AGVQR--SWNLHFDLLSEQGGLEVTLQHNLDFHLG 494
A +QR WNL F SEQG + L H +D LG
Sbjct: 214 AAMQRVTQWNLDFTEHSEQGDRYMELAHRVDEALG 248
>07_03_0190 + 14893243-14893582,14893684-14893808
Length = 154
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 315 GGHEGDPAVCRD*APRD-RHQEEVDAPAHLHGVRSSLCTLRIQGP 184
GG P + R PRD R +DAP+ R++ CT R + P
Sbjct: 55 GGPRRWPGLSRTSPPRDLRRSGLIDAPSTTSTTRTARCTSRSEPP 99
>06_01_0917 - 7077934-7080339
Length = 801
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 306 HARHAFDLPHDSVLRGFILRFPLQANQL 389
H LP D++LRG + RFP +A L
Sbjct: 223 HPEEVAGLPVDAILRGSVRRFPDEAGAL 250
>04_03_0795 -
19704354-19704464,19705152-19705214,19705298-19705378,
19705468-19705623,19705711-19705785,19706477-19706587,
19707206-19707304,19707453-19707546,19707779-19707838,
19709262-19709334,19711448-19711490,19711533-19711606,
19711985-19712075,19712170-19712214,19712533-19712589,
19713440-19713544,19713817-19713932,19714625-19714634,
19714810-19714920,19715502-19715594,19715664-19715690,
19715736-19715798,19716326-19716451,19716812-19716949,
19717164-19717832,19717949-19718123,19718269-19718450
Length = 1015
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 575 NSPVRWYEGDGMFSFELAQLHALVELTVVNDHYWLPERAGSLSVLPDM 718
N +RW M FE+ +LHA EL W +R +L + D+
Sbjct: 377 NCTLRWLLLHRMLEFEVKELHA--ELLKTRKSMWYEKRHDALECMKDL 422
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,996,741
Number of Sequences: 37544
Number of extensions: 505648
Number of successful extensions: 1526
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -