Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_O09
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 242 2e-64
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 242 2e-64
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 242 2e-64
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 84 1e-16
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 83 2e-16
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 83 3e-16
Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical pr... 47 2e-05
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 39 0.005
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 28 8.4
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 28 8.4
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 28 8.4
AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical ... 28 8.4
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 242 bits (593), Expect = 2e-64
Identities = 114/133 (85%), Positives = 122/133 (91%), Gaps = 2/133 (1%)
Frame = -1
Query: 491 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 312
KMEVKVV+KSNFKPSLL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMA
Sbjct: 304 KMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMA 363
Query: 311 GMKETQLSAEIELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKVFEPKLNYSDHD 138
GMKE+Q+SAEI+LL T KKKW RPP+SM FEVPFAPSG KVRYLKVFEPKLNYSDHD
Sbjct: 364 GMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKVFEPKLNYSDHD 423
Query: 137 VIKWVRYIGRSGL 99
VIKWVRYIGRSGL
Sbjct: 424 VIKWVRYIGRSGL 436
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -2
Query: 679 KPVVVIDDCQFHQCVKLSKFETEHSISFIPPD 584
+ V IDDCQFHQCVKL+KFETEH+ISFIPPD
Sbjct: 242 RAAVAIDDCQFHQCVKLTKFETEHAISFIPPD 273
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 582 GEFELMRYRTTKDISLPFRVIPLVREVGRTQ 490
GE+ELMRYRTTKDI LPFRVIPLVREV R +
Sbjct: 274 GEYELMRYRTTKDIQLPFRVIPLVREVSRNK 304
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 242 bits (593), Expect = 2e-64
Identities = 114/133 (85%), Positives = 122/133 (91%), Gaps = 2/133 (1%)
Frame = -1
Query: 491 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 312
KMEVKVV+KSNFKPSLL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMA
Sbjct: 298 KMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMA 357
Query: 311 GMKETQLSAEIELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKVFEPKLNYSDHD 138
GMKE+Q+SAEI+LL T KKKW RPP+SM FEVPFAPSG KVRYLKVFEPKLNYSDHD
Sbjct: 358 GMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKVFEPKLNYSDHD 417
Query: 137 VIKWVRYIGRSGL 99
VIKWVRYIGRSGL
Sbjct: 418 VIKWVRYIGRSGL 430
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -2
Query: 679 KPVVVIDDCQFHQCVKLSKFETEHSISFIPPD 584
+ V IDDCQFHQCVKL+KFETEH+ISFIPPD
Sbjct: 236 RAAVAIDDCQFHQCVKLTKFETEHAISFIPPD 267
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 582 GEFELMRYRTTKDISLPFRVIPLVREVGRTQ 490
GE+ELMRYRTTKDI LPFRVIPLVREV R +
Sbjct: 268 GEYELMRYRTTKDIQLPFRVIPLVREVSRNK 298
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 242 bits (593), Expect = 2e-64
Identities = 114/133 (85%), Positives = 122/133 (91%), Gaps = 2/133 (1%)
Frame = -1
Query: 491 KMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA 312
KMEVKVV+KSNFKPSLL QK+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMA
Sbjct: 304 KMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMA 363
Query: 311 GMKETQLSAEIELLETDT--KKKWTRPPISMGFEVPFAPSGFKVRYLKVFEPKLNYSDHD 138
GMKE+Q+SAEI+LL T KKKW RPP+SM FEVPFAPSG KVRYLKVFEPKLNYSDHD
Sbjct: 364 GMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVPFAPSGLKVRYLKVFEPKLNYSDHD 423
Query: 137 VIKWVRYIGRSGL 99
VIKWVRYIGRSGL
Sbjct: 424 VIKWVRYIGRSGL 436
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -2
Query: 679 KPVVVIDDCQFHQCVKLSKFETEHSISFIPPD 584
+ V IDDCQFHQCVKL+KFETEH+ISFIPPD
Sbjct: 242 RAAVAIDDCQFHQCVKLTKFETEHAISFIPPD 273
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -3
Query: 582 GEFELMRYRTTKDISLPFRVIPLVREVGRTQ 490
GE+ELMRYRTTKDI LPFRVIPLVREV R +
Sbjct: 274 GEYELMRYRTTKDIQLPFRVIPLVREVSRNK 304
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 83.8 bits (198), Expect = 1e-16
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = -1
Query: 506 RWAAPKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWK 327
R A ++E V KS FK + +EV IP P + S + G AKY NAIVW
Sbjct: 288 RHAHSRVEYMVKAKSQFKRQSVANHVEVIIPVPSDVSAPKFKTGAGTAKYVPELNAIVWS 347
Query: 326 IKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPKLNY 150
I+ G +E + + L +++ RPPI++ FE+P + SG +VRYLK+ E
Sbjct: 348 IRSFPGGREYIMRSSFMLPSIGSEELEGRPPINVKFEIPYYTTSGLQVRYLKIIEK---- 403
Query: 149 SDHDVIKWVRYIGRSG 102
S + + WVRY+ ++G
Sbjct: 404 SGYQALPWVRYVTQNG 419
Score = 48.0 bits (109), Expect = 7e-06
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = -2
Query: 670 VVIDDCQFHQCVKLSKFETEHSISFIPPD 584
V ++D +FHQCV+LS+F++E +ISFIPPD
Sbjct: 234 VELEDIKFHQCVRLSRFDSERTISFIPPD 262
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 83.4 bits (197), Expect = 2e-16
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Frame = -1
Query: 515 SCGRWAAPKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAI 336
S R + ++ + KS FK +E+ IP P + + G KY ++A
Sbjct: 281 SIERHSHSRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAF 340
Query: 335 VWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPK 159
VW IK G KE L+A + L +++ RPPI + FE+P F SG +VRYLK+ E
Sbjct: 341 VWTIKNFPGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEK- 399
Query: 158 LNYSDHDVIKWVRYIGRSG 102
S + + WVRYI ++G
Sbjct: 400 ---SGYQALPWVRYITQNG 415
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = -2
Query: 670 VVIDDCQFHQCVKLSKFETEHSISFIPPD 584
V ++D +FHQCV+LS+F+T+ +ISFIPPD
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPD 258
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 82.6 bits (195), Expect = 3e-16
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Frame = -1
Query: 515 SCGRWAAPKMEVKVVLKSNFKPSLLGQKIEVKIPTPLNTSGVQLICLKGKAKYKASENAI 336
S R + ++ + KS FK +E+ IP P + + G KY ++A
Sbjct: 281 SIERHSHSRVSFIIKAKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAF 340
Query: 335 VWKIKRMAGMKETQLSAEIELLETDTKKKWTRPPISMGFEVP-FAPSGFKVRYLKVFEPK 159
VW IK G KE L+A + L +++ RPPI + FE+P F SG +VRYLK+ E +
Sbjct: 341 VWTIKNFPGGKEYLLTAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEKR 400
Query: 158 LNYSDHDVIKWVRYIGRSG 102
+ + WVRYI ++G
Sbjct: 401 ----GYQALPWVRYITQNG 415
Score = 48.4 bits (110), Expect = 6e-06
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = -2
Query: 670 VVIDDCQFHQCVKLSKFETEHSISFIPPD 584
V ++D +FHQCV+LS+F+T+ +ISFIPPD
Sbjct: 230 VELEDVKFHQCVRLSRFDTDRTISFIPPD 258
>Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical
protein K11D2.3b protein.
Length = 58
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = -1
Query: 242 RPPISMGFEVP-FAPSGFKVRYLKVFEPKLNYSDHDVIKWVRYIGRSG 102
RPPI + FE+P F SG +VRYLK+ E S + + WVRYI ++G
Sbjct: 8 RPPIKVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRYITQNG 51
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 38.7 bits (86), Expect = 0.005
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -2
Query: 667 VIDDCQFHQCVKLSKFETEHSISFIPPD 584
++DD FH CV+ ++E E +SF+PPD
Sbjct: 227 LLDDVSFHPCVRYKRWENEKVLSFVPPD 254
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 35.1 bits (77), Expect = 0.055
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = -1
Query: 380 CLKGKAKYKASENAIVWKIKRM-----AGMKETQLSAEIELLETDTKKKWTRPPISMGFE 216
C G+AKY+ ++VW+I R+ A K L EL D + P + F
Sbjct: 1469 CAIGEAKYEHVYRSLVWRIPRLPEKHHAAYKSHLLKCRFELSSFDLMPEEFLPRCDVDFT 1528
Query: 215 VPFAP-SGFKVRYLKVFEPKLNYSDHD-VIKWVRYIGR 108
+P A S VR + V + + D D V K+VRY+ +
Sbjct: 1529 MPLATVSNTVVRSVSVEQ----HEDSDRVEKFVRYVAK 1562
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 429 DLLSEQGGLEVTLQHNLDFHLGCGPPP 509
D +S G H+ D HLG GPPP
Sbjct: 47 DSMSHHRGEHSPNHHHQDNHLGSGPPP 73
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 429 DLLSEQGGLEVTLQHNLDFHLGCGPPP 509
D +S G H+ D HLG GPPP
Sbjct: 47 DSMSHHRGEHSPNHHHQDNHLGSGPPP 73
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 429 DLLSEQGGLEVTLQHNLDFHLGCGPPP 509
D +S G H+ D HLG GPPP
Sbjct: 47 DSMSHHRGEHSPNHHHQDNHLGSGPPP 73
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 429 DLLSEQGGLEVTLQHNLDFHLGCGPPP 509
D +S G H+ D HLG GPPP
Sbjct: 47 DSMSHHRGEHSPNHHHQDNHLGSGPPP 73
>AC006832-8|AAF40000.1| 465|Caenorhabditis elegans Hypothetical
protein ZK355.6 protein.
Length = 465
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 407 LNTSGVQLICL--KGKAKYKASENAIVWKIKRM 315
LN S ++ CL GK +A + VWK+K+M
Sbjct: 335 LNMSSLEPFCLFIYGKVVLEAGDEEFVWKLKKM 367
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,255,612
Number of Sequences: 27780
Number of extensions: 377311
Number of successful extensions: 1131
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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