Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_O08
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0065 + 20450814-20452748 33 0.34
12_01_0830 - 7678038-7678444,7678996-7680943,7681231-7681983,768... 32 0.45
05_07_0359 - 29539294-29540832,29542366-29542518 31 1.4
04_04_1330 - 32700333-32700770 31 1.4
12_02_1174 - 26696869-26698191 30 2.4
05_02_0099 - 6582498-6582725,6583148-6583235,6583437-6583830,658... 30 2.4
04_04_1421 - 33449539-33449994 29 3.2
01_04_0109 + 16112581-16112934 29 3.2
01_06_1076 + 34359922-34360452 29 4.2
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 5.5
05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004 29 5.5
05_01_0570 + 5061600-5062142,5062790-5062972 29 5.5
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 29 5.5
03_02_0816 + 11487811-11488708,11488835-11489235 29 5.5
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 28 7.3
03_03_0023 + 13839421-13840326 28 7.3
02_05_0781 + 31715100-31715672 28 7.3
02_05_0547 - 29894421-29894782,29894856-29895045 28 7.3
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 28 9.6
09_06_0374 + 22649455-22650024,22650085-22650637,22650812-226511... 28 9.6
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 28 9.6
07_03_1389 + 26212117-26212119,26212721-26212875,26213402-262134... 28 9.6
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 28 9.6
05_07_0104 + 27715123-27715350 28 9.6
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226... 28 9.6
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 28 9.6
>03_05_0065 + 20450814-20452748
Length = 644
Score = 32.7 bits (71), Expect = 0.34
Identities = 30/91 (32%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Frame = +3
Query: 186 PGSKPGQSRGVPAVNTTTRHAAPPRGRPTDGSS----RR*STTNDVSLRGTAALPGRP-- 347
PGSKP + T AA GR GS R + + G A R
Sbjct: 12 PGSKPRPAAATSVSTAATADAAVAGGRSGSGSGSGIGRLSALIRSLCSAGRTAEAARALA 71
Query: 348 --GDAAGVPGYPAGPEPACRVGTRYTADRVA 434
GDAAGV Y A CR G A R+A
Sbjct: 72 DAGDAAGVVAYNAMVAGYCRAGQLAAARRLA 102
>12_01_0830 -
7678038-7678444,7678996-7680943,7681231-7681983,
7682701-7682824,7683590-7683723
Length = 1121
Score = 32.3 bits (70), Expect = 0.45
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = +2
Query: 128 RAHPLNDSPXTLTPGVRSPSGVKTRSE*GGSRGQHYNQTRGATPRTPDRR 277
R P TLTP RSPS R S G N TRGA+P +RR
Sbjct: 141 RRSPTPPGNKTLTPPRRSPSPASRRMS-ATSSGPTLNGTRGASPVKTNRR 189
>05_07_0359 - 29539294-29540832,29542366-29542518
Length = 563
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/75 (33%), Positives = 29/75 (38%)
Frame = +3
Query: 171 ASDLRPGSKPGQSRGVPAVNTTTRHAAPPRGRPTDGSSRR*STTNDVSLRGTAALPGRPG 350
A+ LR G K G R T RG G R+ +T +SL G PGRP
Sbjct: 204 ATPLRLGVKRGPGRPRKNAAATPLRLGAKRG---PGRPRKNATATPLSL-GVKRGPGRPR 259
Query: 351 DAAGVPGYPAGPEPA 395
A P P PA
Sbjct: 260 KNAAAAASPVAPPPA 274
>04_04_1330 - 32700333-32700770
Length = 145
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 149 SPXTLT-PGVRSPSGVKTRSE*GGSRGQHYNQTRGATPRTPDRRVVEAIVDDQR 307
SP L G R G E GG R +H + A+P P+R VV + + +R
Sbjct: 12 SPHRLARAGSRRRGGGSDGEELGGGRDEHEGERERASPVEPEREVVGVVGERER 65
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Frame = +1
Query: 133 PPTKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPED----ARPTGRRGDSRR 300
PP + P Y P ++ + G P S+ P T+ P P GD R
Sbjct: 302 PPPPQQPSQRYWTPPPAITPEPAKPAAGKPTSSSPPSTKDSPRPPLPAPSPAANGGDPRL 361
Query: 301 PTTSVSAVRRPYQAARAMPLVFRDTPLGQNQPAGSERDTPP 423
P T+ + ++ + R +G+ A +E + PP
Sbjct: 362 PATTPLSKQKRKEEKREK----EAQEMGRAGAAAAEEERPP 398
>05_02_0099 -
6582498-6582725,6583148-6583235,6583437-6583830,
6585855-6585990,6586413-6586931
Length = 454
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 530 VRRSLNPLRSPRDHHREETASS*GPELDKRPPPTPGSTA 646
V R L+ L P+ HHR ++SS P PPP P + A
Sbjct: 47 VSRRLHSLDLPK-HHRRSSSSSPPPMPPPLPPPPPSANA 84
>04_04_1421 - 33449539-33449994
Length = 151
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/74 (37%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +3
Query: 222 AVNTTTRHAAPPRGRPTDGSSR-R*STTNDVSLRGTAALPGRPGDAAGVPGYPAGPEPAC 398
AV T AA DG+ R R NDV G P P AG GYPA P PA
Sbjct: 32 AVAATVAVAAVAAFGCADGAKRQRRKNRNDVYYYGQGYPPPPP---AGAYGYPAQPPPA- 87
Query: 399 RVGTRYTADRVALP 440
G Y A P
Sbjct: 88 --GYAYPAANAGRP 99
>01_04_0109 + 16112581-16112934
Length = 117
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = +3
Query: 231 TTTRHAAPPRGRPTDGSSRR*STTNDVSLRGTAALPGRPGDAAGVPGYPAGPEPA 395
T H + R +PT SRR + R AA P AG P + PEP+
Sbjct: 31 TANNHQSDARTKPTTAGSRRRQGRGSSAARKAAARPVAVEVYAG-PAFSVSPEPS 84
>01_06_1076 + 34359922-34360452
Length = 176
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +3
Query: 246 AAPPRGRPTDGSSRR*STTNDVSLRGTAALPGRPGDAAGVPGYPAGPEPAC 398
+A PR RP G SRR S+ R A P RPG G P AC
Sbjct: 68 SAQPRRRPR-GGSRRWSSRGRQPGRQQKAAPRRPGRRLKAEGVRCRPMVAC 117
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -1
Query: 386 WPSGVSRNTSGIARAAW*GRRTAETDVVGRRLSPRRPVGRASSGWRRVSG 237
W ++ +SG R +W G R +D + G +G RRV G
Sbjct: 48 WKVHTTKRSSGTRRISWVGERRQRSDEARPERRRQEGAGGRGAGVRRVEG 97
>05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004
Length = 591
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 164 TPGVRSPSGVKTRSE*GGSRGQHYNQTRGATPRTPDRRVVE 286
+P +RSPSG+K + + G N+ R T R PD ++++
Sbjct: 497 SPMLRSPSGLKNFNAELKAAGYDLNRWRETTRRRPDLQILD 537
>05_01_0570 + 5061600-5062142,5062790-5062972
Length = 241
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 208 VGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTS 312
VGG ++ RR P TG G +RRPT++
Sbjct: 159 VGGARGRAVRGSARRRPRKEETTGINGTARRPTST 193
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 183 RPGSKPGQSRGVPAVNTTTRHAAPPRGRPTDGSS 284
R G + G+ P+ TTRHA P R DG +
Sbjct: 583 RRGGRGGRRLPSPSTRPTTRHALPGEDRSHDGGA 616
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 608 LDKRPPPTPGSTAAARRRK 664
L RPPP P TAA +RRK
Sbjct: 152 LPTRPPPPPPETAAEKRRK 170
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 321 GTAALP-GRPGDAAGVPGYPAGPEPACRVG 407
G LP GRPG AAG AGP A R G
Sbjct: 650 GFTILPDGRPGSAAGASTSSAGPLAAARGG 679
>03_03_0023 + 13839421-13840326
Length = 301
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +3
Query: 240 RHAAPPRGRPTDGSSRR*STTNDVSLRGTAALPGRPGDAAGVPGYPAGPEPA 395
RHA PR PT ++RR V++ AL RP A VPG+P P PA
Sbjct: 7 RHARLPR--PTAPTARRSRRLRVVAV----ALRTRPTSLA-VPGFPPAPAPA 51
>02_05_0781 + 31715100-31715672
Length = 190
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Frame = +3
Query: 240 RHAAPPRGRPTDGSSRR*STT---NDV-SLRG-TAALPGRPGDA------AGVPGYPAGP 386
RHAA P RP+ +SRR STT DV S R L G P A +P + P
Sbjct: 64 RHAAAPPPRPSASTSRRSSTTVVATDVSSFRSMVQELTGFPAAAIFRPLPRRIPVHAVNP 123
Query: 387 EPACR 401
PA R
Sbjct: 124 SPAVR 128
>02_05_0547 - 29894421-29894782,29894856-29895045
Length = 183
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -1
Query: 659 GAVPPP-SSRGSEEGVCPAPAPM 594
G PPP SSR + PAPAP+
Sbjct: 136 GTTPPPGSSRKGDRAAAPAPAPL 158
>10_01_0030 -
386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +1
Query: 205 RVGGFPRSTLQPDTRRHPEDARPTGRRGDSRRPTTSVSAVRRPYQAARAMPLV 363
RVG P P P DAR G S + +VS V R Q + +V
Sbjct: 770 RVGSTPNKNAAPKQVWEPMDARKKASLGSSNGSSETVSGVDRSNQVGCSKDIV 822
>09_06_0374 +
22649455-22650024,22650085-22650637,22650812-22651147,
22651171-22652605,22652939-22653062
Length = 1005
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 106 RPR-AQGI*GPPTKRLPXHSYTRRPISVRGQNPVRVGGFPRSTLQPDTRRHPEDAR---P 273
RPR A G P +R P + R+P+ R P R G +P RR P AR P
Sbjct: 409 RPRIAYGKPRRPPRRPPGLARPRKPLGRRPPGPARPG-------KPLGRRPPGPARPGKP 461
Query: 274 TGRRGDSRR 300
GRR D R
Sbjct: 462 LGRRPDFAR 470
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -3
Query: 411 AFRPGRLVLAQRGIPEHQRHRPGGLVGPPYRG 316
AFR L A RG E Q+ GG GP YRG
Sbjct: 47 AFRYEALSAATRGFSERQKLGQGGF-GPVYRG 77
>07_03_1389 +
26212117-26212119,26212721-26212875,26213402-26213479,
26214211-26214375,26214453-26214554,26214661-26214786,
26215454-26215490
Length = 221
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 176 RSPSGVKTRSE*GGSRGQHYNQTRGATPR 262
+ PS +++R GSRG+ Y+Q +PR
Sbjct: 122 KKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +3
Query: 210 RGVPAVNTTTRHAAPPRGRPTDGSSRR*STTNDVSLRGTAALPGRPGDAAGVPGYPAGPE 389
+G P V + + A PP +P G+S + ++ +G + PG AAG G AG
Sbjct: 226 QGNPQVPSQAQAAPPPPVQPAGGASGPNANPLNLFPQGIPSAGSNPGAAAGA-GAGAGAL 284
Query: 390 PACR 401
A R
Sbjct: 285 DALR 288
>05_07_0104 + 27715123-27715350
Length = 75
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 302 GRRLSPRRPVGRASSGWRRVS 240
GRRL P P R W RVS
Sbjct: 31 GRRLHPPAPAARGGGAWNRVS 51
>02_05_0902 +
32620668-32621209,32621847-32622258,32622471-32622675,
32622712-32622806,32622945-32623557,32623652-32623820,
32624392-32624749,32625226-32625336,32626207-32626561,
32627262-32627484,32627837-32628058,32628628-32628781
Length = 1152
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 656 AVPPPSSRGSEEGVCPAPAPMR 591
+VPPP S S+E P PAP +
Sbjct: 81 SVPPPLSASSDEEEAPRPAPAK 102
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 332 GRRTAETDVVGRRLSPRRPVGRASSGWRRVSGCSVDRGN 216
G+ TA+ D G+ + + G + GCS +RG+
Sbjct: 586 GKSTADVDPAGKSTATQEEAQAVDVGQEKAGGCSRERGS 624
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,924,646
Number of Sequences: 37544
Number of extensions: 565508
Number of successful extensions: 2664
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2641
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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