Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_N08
(791 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 91 1e-19
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 91 2e-19
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 84 2e-17
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 72 1e-13
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 66 7e-12
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.76
SPAC23C11.04c |pnk1||DNA kinase/phosphatase Pnk1|Schizosaccharom... 29 0.76
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 29 1.0
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 27 2.3
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 4.1
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 27 4.1
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 5.4
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 25 9.4
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 91.5 bits (217), Expect = 1e-19
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = -3
Query: 438 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 259
KN LESY +S++++++D LK+K+ SDK+ I +TI+WLD N A K+EYE KQKE
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKE 596
Query: 258 LEGICNPIITKMYQ 217
LEG+ NPI+ K+YQ
Sbjct: 597 LEGVANPIMAKIYQ 610
Score = 88.6 bits (210), Expect = 9e-19
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -1
Query: 704 KDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTXQGEQ 555
KD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T + ++
Sbjct: 449 KDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
Score = 64.9 bits (151), Expect = 1e-11
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -2
Query: 565 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQ 437
K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQA+
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAK 537
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 90.6 bits (215), Expect = 2e-19
Identities = 38/74 (51%), Positives = 56/74 (75%)
Frame = -3
Query: 438 KNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKE 259
KN LESY +S++++++D LK+K+ SDK+T+ +TI+WLDSN A K+E+E KQKE
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKE 596
Query: 258 LEGICNPIITKMYQ 217
LE + NPI+ K+YQ
Sbjct: 597 LESVANPIMAKIYQ 610
Score = 88.6 bits (210), Expect = 9e-19
Identities = 40/50 (80%), Positives = 46/50 (92%)
Frame = -1
Query: 704 KDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTXQGEQ 555
KD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T + ++
Sbjct: 449 KDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQK 498
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -2
Query: 565 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQ 437
K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQA+
Sbjct: 495 KTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAK 537
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 84.2 bits (199), Expect = 2e-17
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = -1
Query: 704 KDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 573
KDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS
Sbjct: 478 KDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKS 521
Score = 62.9 bits (146), Expect = 5e-11
Identities = 28/75 (37%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = -3
Query: 438 KNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCNDTIKWLD-SNQLADKEEYEHKQ 265
+N LE+Y +S+K +D E+L K+ DKQ +LD D +WL+ + A KEE+E ++
Sbjct: 567 RNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQR 626
Query: 264 KELEGICNPIITKMY 220
++L+ + +PI K+Y
Sbjct: 627 QKLDAVVHPITQKLY 641
Score = 55.2 bits (127), Expect = 1e-08
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = -2
Query: 586 LSRSPPXKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAQECI 428
+ +S K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+ +
Sbjct: 518 VDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTL 570
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 71.7 bits (168), Expect = 1e-13
Identities = 30/45 (66%), Positives = 40/45 (88%)
Frame = -1
Query: 704 KDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 570
+DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+T
Sbjct: 492 RDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKAT 536
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -2
Query: 565 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ 443
K++ IT+ G L+ EIE MV +AEKYR D +KE I+
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIE 577
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 65.7 bits (153), Expect = 7e-12
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = -1
Query: 701 DNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 570
+N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+T
Sbjct: 455 ENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKTT 498
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.76
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 535 KGRLSKEEIERMVNEAEKYRNEDD 464
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC23C11.04c |pnk1||DNA kinase/phosphatase
Pnk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 29.1 bits (62), Expect = 0.76
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -3
Query: 468 MTSKRRPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSNQL 295
M+SK+R S P+ +L SY F KS+ +K + DSD + + I+W ++ L
Sbjct: 1 MSSKKRKSPPQESLTSY-FE-KSSKSSKKYGSQNKDSDSSSTCLQQKIEIQWSITDSL 56
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 378 KEKISDSDKQTILD-KCNDTIKWLDSNQLADKEEYEHKQKELE 253
+EKI +++TI D K + + ++ EEY KQKEL+
Sbjct: 427 EEKIDSDEEETIDDAKSEMFVDLSEEEEVRQYEEYRKKQKELQ 469
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 415 AVRFQCILGPGWSPFACHPRFCTSLPH*PYARSLPWRDDL 534
A+ F+C++G W PF C+ H Y + + WR+ L
Sbjct: 320 AIMFECLIG--WPPF------CSENSHETYRKIINWRETL 351
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 589 ETLRIPLASMSKVTSI*GTPRGAGGIP 669
E L PLA MS TSI G G GG P
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFP 102
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 444 RPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKW 313
R K E YC S+ ST + + K +SD T+L T+ W
Sbjct: 282 RRKEVFEEYCKSVVSTKKITRRKNTLSDF--WTLLHSLPSTLLW 323
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 5.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = -3
Query: 453 RPSRPKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKC-NDTIKWLDSNQLADKEEY 277
+ + PKNA ++ M DE+ E S K+ K +D + LD + E+
Sbjct: 118 KKASPKNAFDALADDMDDLSLDEEESESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKD 177
Query: 276 EHKQKE 259
+ K+K+
Sbjct: 178 KKKKKK 183
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 198 RGLLRHPGTSSLLSDCKCLPILSA-CAH 278
R ++ H GT + D CLP SA C H
Sbjct: 122 REVVHHEGTCEICYDEGCLPFFSAECDH 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,739,399
Number of Sequences: 5004
Number of extensions: 51420
Number of successful extensions: 224
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 223
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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