Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_N08
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.61 
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   5.7  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   5.7  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   5.7  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   5.7  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   5.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.7  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.9  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 526 LSKEEIERMVNEAEKYRNED--DKQKET-IQAQECIGILLLQHEVYH 395
           L + ++E ++ EA+  +N D  DK K+  +    C+  +LL+  +YH
Sbjct: 577 LPEVDVEEILGEAKVLQNFDIKDKNKKVNVAGCRCVKGILLKSGLYH 623


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 HYQRQRSSLQGRDRAY 501
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 HYQRQRSSLQGRDRAY 501
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 HYQRQRSSLQGRDRAY 501
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 HYQRQRSSLQGRDRAY 501
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 HYQRQRSSLQGRDRAY 501
           HY R+RS  + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 548 HYQRQRSSLQGRDRAY 501
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 581 EKSTXQGEQDHHYQRQRSSLQGRDR 507
           E+++ + E+++   R+RS  + RDR
Sbjct: 279 EQNSYKNEREYRKYRERSKERSRDR 303


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 405 KSTMEDEKLKEKISDSDKQTILDKCN 328
           + +++ EK+K  +S    +T+  KCN
Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 646 PRGAGGIPVS 675
           PRG GG+P S
Sbjct: 399 PRGPGGVPTS 408


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,514
Number of Sequences: 438
Number of extensions: 4125
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)