Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M24
         (836 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-9|CAH10778.1|  403|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z80216-8|CAB02284.2|  261|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical ...    30   1.8  

>Z80216-9|CAH10778.1|  403|Caenorhabditis elegans Hypothetical
           protein F10G8.9b protein.
          Length = 403

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 518 HDGLIPAHVPLLMGEQSNAWRILLRNDRXSDIEGSKSNVAM 640
           +D ++PA+  L   ++ N   +L  N + SD+ G+KS +++
Sbjct: 345 NDDVLPANRNLEETDEGNGLNLLRENQKWSDVSGNKSRISI 385


>Z80216-8|CAB02284.2|  261|Caenorhabditis elegans Hypothetical
           protein F10G8.9a protein.
          Length = 261

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +2

Query: 518 HDGLIPAHVPLLMGEQSNAWRILLRNDRXSDIEGSKSNVAM 640
           +D ++PA+  L   ++ N   +L  N + SD+ G+KS +++
Sbjct: 203 NDDVLPANRNLEETDEGNGLNLLRENQKWSDVSGNKSRISI 243


>AC084158-3|AAL00872.1|  313|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.18b protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 625 KQRRYERLAAKSQLSLVVPFLAPLA-KNSLF*RIDRPCFRS 744
           K+     L A   LSL VPFL PL  K SLF R + P F+S
Sbjct: 245 KESATSELPASKYLSLSVPFLHPLLFKLSLFRRPNFPHFKS 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,105,058
Number of Sequences: 27780
Number of extensions: 372491
Number of successful extensions: 1025
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)