Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M23
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical pr...    50   2e-06
AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.    50   2e-06
AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine re...    31   1.3  
Z92777-7|CAI79120.1|  294|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine rece...    29   4.0  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    28   9.3  

>Z92970-1|CAB07480.1|  488|Caenorhabditis elegans Hypothetical
           protein H06O01.1 protein.
          Length = 488

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = -1

Query: 728 PPHFXXPKDSSXKPQRYNGGRAXEDFIKYVSEQATSELKGWDRKGNAKQGKE 573
           P  F  PK++   P  YNGGR  +DF+ ++S+ +T  LKG+ R G  K+  E
Sbjct: 436 PTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487


>AB072567-1|BAB88817.1|  488|Caenorhabditis elegans ceERp57 protein.
          Length = 488

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = -1

Query: 728 PPHFXXPKDSSXKPQRYNGGRAXEDFIKYVSEQATSELKGWDRKGNAKQGKE 573
           P  F  PK++   P  YNGGR  +DF+ ++S+ +T  LKG+ R G  K+  E
Sbjct: 436 PTLFWLPKNAKSNPIPYNGGREVKDFVSFISKHSTDGLKGFSRDGKKKKKTE 487


>AF039053-5|AAC25875.2|  293|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 23 protein.
          Length = 293

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +1

Query: 373 HYYCKRNDNVSVPKECFSYLLSLGQI*HR*TQKSYFIVFHITFILHTNTHADLSWXSFES 552
           +Y+C  N  ++ P+ C +   S+     R   KS  ++F +TF       + L W  F+ 
Sbjct: 146 YYFC--NFELTFPRNCLTIGCSINACSSRFWTKSKLVIFVLTFSFAALLSSKLLWKVFKK 203

Query: 553 QQHAYNSS 576
               +N +
Sbjct: 204 DNKDFNKA 211


>Z92777-7|CAI79120.1|  294|Caenorhabditis elegans Hypothetical
           protein C17H1.10 protein.
          Length = 294

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/63 (26%), Positives = 36/63 (57%)
 Frame = -2

Query: 694 KNLRDIMEDVL*RTSSSMFLNKPQANLRAGTERVTPNKERKSCRRAVVIQNFXMKDLRVY 515
           K+ R++ME  + R ++  +     +N+ +G   +   K  +SC ++V + +  +KDL++ 
Sbjct: 106 KSERNVMEHQI-RMTNMNYAQNMLSNIESGQASLAVIKHMESCIKSVNVISDLLKDLKI- 163

Query: 514 LCE 506
           LCE
Sbjct: 164 LCE 166


>U39849-1|AAA81045.2|  332|Caenorhabditis elegans Serpentine
           receptor, class h protein39 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 10/51 (19%), Positives = 28/51 (54%)
 Frame = +3

Query: 252 CPVTLKAMRDETVFMHLCYFVNLVKLS*TCYQ*ILWLMNATLLLQEERQCL 404
           C   +  + +  +F + C+F+ +++L  T Y   L + ++   +++ ++CL
Sbjct: 3   CKQEVSLLENPVIFRNFCFFLTILELFPTSYAMYLLIYHSPTQMKDMKRCL 53


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 167 TQHMTTLAIFIKMFIISLPKGLKCYHTFVPRYTESN 274
           T  +T  AI   +FI+S+  GLKCY  F  +   SN
Sbjct: 418 TYAITGGAIIAILFILSVCAGLKCYKKFNNKKKASN 453


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,603,476
Number of Sequences: 27780
Number of extensions: 341870
Number of successful extensions: 953
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)