Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M23
         (821 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    25   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.5  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    24   1.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.0  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   7.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   7.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   7.9  

>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = +1

Query: 160 YQYTTYDNTSDFYKNVYY 213
           Y+Y+ Y+N +++ K +YY
Sbjct: 89  YKYSNYNNYNNYNKKLYY 106


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 12/56 (21%), Positives = 29/56 (51%)
 Frame = +2

Query: 68  NAIKLTVFRTILIINGHLNLCN*FITHKSRFISTQHMTTLAIFIKMFIISLPKGLK 235
           NA  LT+  T   +  ++ +C+ FI+H    +S      + I++    +++P+ ++
Sbjct: 139 NATVLTI--TAFTVERYIAICHPFISHTMSKLSRAVKFIIVIWLLALCLAVPQAIQ 192


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 396 VVPLAIVMLHSLTIIFTDNRS 334
           V+P   +ML +LT+++ D+RS
Sbjct: 260 VIPAVTMMLLTLTVLWLDSRS 280


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 160 YQYTTYDNTSDFYKNVYYFLTKRSKMLSYI 249
           Y+Y+ Y+N +++  N Y    K+    +YI
Sbjct: 322 YKYSNYNNYNNYNNNNYNNYNKKLYYKNYI 351


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +1

Query: 376 YYCKRNDNVSVPKECFSYLLSLGQI 450
           Y  +  DN+ +P++C  + + L ++
Sbjct: 116 YLRRYEDNIFLPEDCLLFTIELDRV 140


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +1

Query: 376 YYCKRNDNVSVPKECFSYLLSLGQI 450
           Y  +  DN+ +P++C  + + L ++
Sbjct: 131 YLRRYEDNIFLPEDCLLFTIELDRV 155


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 160 YQYTTYDNTSDFYKNVY 210
           Y+Y+ Y+N ++ Y N Y
Sbjct: 89  YKYSNYNNYNNNYNNNY 105


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 160 YQYTTYDNTSDFYKNVY 210
           Y+Y+ Y+N ++ Y N Y
Sbjct: 89  YKYSNYNNYNNNYNNNY 105


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +1

Query: 496 TFILHTNTHADLSWXS 543
           T + H  TH +++W S
Sbjct: 172 TIVFHLETHPNVTWYS 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,749
Number of Sequences: 438
Number of extensions: 4531
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)