Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M18
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342... 103 1e-22
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327... 103 1e-22
07_01_0328 - 2291696-2291951,2292462-2293708 29 3.6
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663... 29 3.6
>12_01_0435 +
3428552-3428636,3429242-3429352,3429434-3429738,
3429821-3430230,3430323-3430556,3430934-3431378,
3432300-3432390,3433292-3433518,3433786-3433861,
3434009-3434134,3434221-3434384
Length = 757
Score = 103 bits (248), Expect = 1e-22
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -2
Query: 385 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 206
A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R ALE+
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
Query: 205 INLKFI 188
I LKFI
Sbjct: 358 IKLKFI 363
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = -1
Query: 572 PVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
P + + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -3
Query: 771 RQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 595
+QKK H+ME + G ++ + EK IPVD+VF +DEMID I +
Sbjct: 175 KQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 234
Query: 594 RWHTKKLPRKTXQG 553
RW +LPRKT +G
Sbjct: 235 RWGVTRLPRKTHRG 248
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1
Query: 185 TSSKFGHGRFQTPADK 138
TSSKFGHGRFQT +K
Sbjct: 365 TSSKFGHGRFQTTDEK 380
>11_01_0427 +
3274817-3274901,3275587-3275697,3275979-3276283,
3276406-3276815,3276942-3277200
Length = 389
Score = 103 bits (248), Expect = 1e-22
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -2
Query: 385 ASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEK 206
A TE+D +EK ITPMGGFPHYG V D++MIKGCC+GPKKR++TLR+SL T R ALE+
Sbjct: 298 ACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEE 357
Query: 205 INLKFI 188
I LKFI
Sbjct: 358 IKLKFI 363
Score = 89.4 bits (212), Expect = 3e-18
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = -1
Query: 572 PVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 429
P + + LRKVACIGAWHP+RVS+TVARAGQ GYHHRTEMNKK+Y+IG
Sbjct: 242 PRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG 289
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -3
Query: 771 RQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXTS 595
+QKK H+ME + G ++ + EK IPVD+VF +DEMID I +
Sbjct: 175 KQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVT 234
Query: 594 RWHTKKLPRKTXQG 553
RW +LPRKT +G
Sbjct: 235 RWGVTRLPRKTHRG 248
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -1
Query: 185 TSSKFGHGRFQTPADKAAFMGTLK 114
TSSKFGHGRFQT +K F G LK
Sbjct: 365 TSSKFGHGRFQTTDEKQRFFGKLK 388
>07_01_0328 - 2291696-2291951,2292462-2293708
Length = 500
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/81 (25%), Positives = 32/81 (39%)
Frame = -2
Query: 370 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAALEKINLKF 191
+L I GG P +GE FV + C + TL S + + +K
Sbjct: 185 ELIRDLIVAGGGHPEHGETTGGFVSLAPCVFDDARDKKTLPPSSGITNVSSLATANGIKI 244
Query: 190 ITPRPSSVMVDSRRRLTRLHS 128
+ P S SRRRL+ + +
Sbjct: 245 MIP-VQSASKGSRRRLSSMQT 264
>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
30366541-30366849,30367544-30370567,30370640-30372290,
30372373-30373463,30373544-30373646,30373737-30374439,
30374654-30375783,30375913-30376027,30376504-30376695,
30377443-30377616,30378438-30378494,30378581-30378716,
30378842-30378927,30379023-30379092,30379993-30380021,
30380444-30380456,30380762-30381006
Length = 3582
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 370 DLSEKSITPMGGFPHYGEVNNDFVMIKGCCMG 275
D + + +P+GG P YG ++ D + C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,092,011
Number of Sequences: 37544
Number of extensions: 467636
Number of successful extensions: 1074
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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