BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M18
(851 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 151 9e-37
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 151 9e-37
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 151 9e-37
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 151 9e-37
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 151 9e-37
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 151 bits (367), Expect = 9e-37
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = -2
Query: 448 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 269
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 293 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 352
Query: 268 KRIITLRKSLRVHTKRAALEKINLKFI 188
KRIITLRKSL HTKR+ALE+I LKFI
Sbjct: 353 KRIITLRKSLLKHTKRSALEQIKLKFI 379
Score = 126 bits (305), Expect = 3e-29
Identities = 77/163 (47%), Positives = 89/163 (54%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRNPQKGWQ 402
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG K +
Sbjct: 249 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 308
Query: 401 SY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYKE 222
L + G FP +G G+ K K K
Sbjct: 309 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 368
Query: 221 GCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
+ + + TSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 369 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 411
Score = 93.1 bits (221), Expect = 4e-19
Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYH-RGQSEWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+KQRQKK H+ME L G + +WAREHLEKPI V +VF QDEMIDC+
Sbjct: 182 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 241
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 242 VTSRWHTKKLPRKTHKG 258
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 151 bits (367), Expect = 9e-37
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = -2
Query: 448 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 269
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 282 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 341
Query: 268 KRIITLRKSLRVHTKRAALEKINLKFI 188
KRIITLRKSL HTKR+ALE+I LKFI
Sbjct: 342 KRIITLRKSLLKHTKRSALEQIKLKFI 368
Score = 126 bits (305), Expect = 3e-29
Identities = 77/163 (47%), Positives = 89/163 (54%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRNPQKGWQ 402
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG K +
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 401 SY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYKE 222
L + G FP +G G+ K K K
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 357
Query: 221 GCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
+ + + TSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 358 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 93.1 bits (221), Expect = 4e-19
Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYH-RGQSEWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+KQRQKK H+ME L G + +WAREHLEKPI V +VF QDEMIDC+
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 151 bits (367), Expect = 9e-37
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = -2
Query: 448 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 269
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 269 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 328
Query: 268 KRIITLRKSLRVHTKRAALEKINLKFI 188
KRIITLRKSL HTKR+ALE+I LKFI
Sbjct: 329 KRIITLRKSLLKHTKRSALEQIKLKFI 355
Score = 126 bits (305), Expect = 3e-29
Identities = 77/163 (47%), Positives = 89/163 (54%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRNPQKGWQ 402
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG K +
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 401 SY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYKE 222
L + G FP +G G+ K K K
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 344
Query: 221 GCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
+ + + TSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 345 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 93.1 bits (221), Expect = 4e-19
Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYH-RGQSEWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+KQRQKK H+ME L G + +WAREHLEKPI V +VF QDEMIDC+
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 218 VTSRWHTKKLPRKTHKG 234
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 151 bits (367), Expect = 9e-37
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = -2
Query: 448 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 269
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 269 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 328
Query: 268 KRIITLRKSLRVHTKRAALEKINLKFI 188
KRIITLRKSL HTKR+ALE+I LKFI
Sbjct: 329 KRIITLRKSLLKHTKRSALEQIKLKFI 355
Score = 126 bits (305), Expect = 3e-29
Identities = 77/163 (47%), Positives = 89/163 (54%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRNPQKGWQ 402
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG K +
Sbjct: 225 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 284
Query: 401 SY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYKE 222
L + G FP +G G+ K K K
Sbjct: 285 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 344
Query: 221 GCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
+ + + TSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 345 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 387
Score = 93.1 bits (221), Expect = 4e-19
Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYH-RGQSEWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+KQRQKK H+ME L G + +WAREHLEKPI V +VF QDEMIDC+
Sbjct: 158 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 217
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 218 VTSRWHTKKLPRKTHKG 234
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 151 bits (367), Expect = 9e-37
Identities = 70/87 (80%), Positives = 77/87 (88%)
Frame = -2
Query: 448 RKSIVLDQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPK 269
+K + GIH KDGKVIKNNASTEYDL++KSITPMGGFPHYGEVNNDFVMIKGCC+G K
Sbjct: 282 KKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSK 341
Query: 268 KRIITLRKSLRVHTKRAALEKINLKFI 188
KRIITLRKSL HTKR+ALE+I LKFI
Sbjct: 342 KRIITLRKSLLKHTKRSALEQIKLKFI 368
Score = 126 bits (305), Expect = 3e-29
Identities = 77/163 (47%), Positives = 89/163 (54%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRNPQKGWQ 402
+ P + K LRKVACIGAWHPSRVS TVARAGQKGYHHRTE+NKKIYRIG K +
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
Query: 401 SY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYKE 222
L + G FP +G G+ K K K
Sbjct: 298 VIKNNASTEYDLTDKSITPMGGFPHYGEVNNDFVMIKGCCIGSKKRIITLRKSLLKHTKR 357
Query: 221 GCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIREE 93
+ + + TSSK GHGRFQTPADK AFMG LKKDR++EE
Sbjct: 358 SALEQIKLKFIDTSSKMGHGRFQTPADKLAFMGPLKKDRLKEE 400
Score = 93.1 bits (221), Expect = 4e-19
Identities = 45/77 (58%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYH-RGQSEWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+KQRQKK H+ME L G + +WAREHLEKPI V +VF QDEMIDC+
Sbjct: 171 IKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKG 230
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,284,131
Number of Sequences: 53049
Number of extensions: 777749
Number of successful extensions: 1870
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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