Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M18
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 106 2e-23
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 106 2e-23
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical pr... 30 2.4
U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone... 30 2.4
AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein. 30 2.4
AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein. 30 2.4
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 7.3
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 357 HEKINLKWI 365
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 298 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 353
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 354 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+++RQKK H++E + G Q +WAREHLEK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 357 HEKINLKWI 365
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 298 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 353
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 354 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+++RQKK H++E + G Q +WAREHLEK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 259 HEKINLKWI 267
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 200 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 255
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 256 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+++RQKK H++E + G Q +WAREHLEK + VD+VFAQDEMID I
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 132
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 133 VTSRWHTKKLPRKTHKG 149
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 309 HEKINLKWI 317
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 250 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 305
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 306 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -3
Query: 666 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTXQG 553
V A +MID I TSRWHTKKLPRKT +G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 357 HEKINLKWI 365
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 298 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 353
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 354 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+++RQKK H++E + G Q +WAREHLEK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 258
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 259 HEKINLKWI 267
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 199
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 200 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 255
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 256 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 298
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+++RQKK H++E + G Q +WAREHLEK + VD+VFAQDEMID I
Sbjct: 73 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 132
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 133 VTSRWHTKKLPRKTHKG 149
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 308
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 309 HEKINLKWI 317
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 249
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 250 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 305
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 306 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 348
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 22/38 (57%)
Frame = -3
Query: 666 VFAQDEMIDCIXXXXXXXXXXXTSRWHTKKLPRKTXQG 553
V A +MID I TSRWHTKKLPRKT +G
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKG 199
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 106 bits (255), Expect = 2e-23
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 394 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRAA 215
KNN STE+DL++K+ITPMGGFP YG VN D++M++G +GPKKR+ITLRKSL TKR A
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTKRVA 356
Query: 214 LEKINLKFI 188
EKINLK+I
Sbjct: 357 HEKINLKWI 365
Score = 105 bits (252), Expect = 4e-23
Identities = 71/163 (43%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 581 RSYPVRHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIGPRN-PQKGW 405
+ P + K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG ++G
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGK 297
Query: 404 QSY*KQCIY*V*LV*EIHYTNGRFPPLW*SKQRLCDDQGLLHGT*KAYHYS*KVSACAYK 225
+ + L + G FP Q +G + G K K K
Sbjct: 298 NNGSTE----FDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKRLITLRKSLITQTK 353
Query: 224 EGCTRKDQPQIHYTSSKFGHGRFQTPADKAAFMGTLKKDRIRE 96
K + TSSK GHGRFQT A+K AFMG LK+D + E
Sbjct: 354 RVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLKRDFLAE 396
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = -3
Query: 780 VKQRQKKXHIMESXLXGYHRGQS-EWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXX 604
+++RQKK H++E + G Q +WAREHLEK + VD+VFAQDEMID I
Sbjct: 171 LRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKG 230
Query: 603 XTSRWHTKKLPRKTXQG 553
TSRWHTKKLPRKT +G
Sbjct: 231 VTSRWHTKKLPRKTHKG 247
>Z50858-5|CAA90722.1| 534|Caenorhabditis elegans Hypothetical
protein F44A6.2 protein.
Length = 534
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 241 LRVHTKRAALEKINLKFITPRPSSVMVDSRRRLTRLHSW 125
LR HT + I ++ I RP +V ++ ++ RL++W
Sbjct: 261 LRAHTTFSFYTDIKIRSIVARPFNVRINEDSKMNRLNAW 299
>U13074-1|AAA96982.1| 534|Caenorhabditis elegans steroid hormone
receptor familymember CNR14 protein.
Length = 534
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 241 LRVHTKRAALEKINLKFITPRPSSVMVDSRRRLTRLHSW 125
LR HT + I ++ I RP +V ++ ++ RL++W
Sbjct: 261 LRAHTTFSFYTDIKIRSIVARPFNVRINEDSKMNRLNAW 299
>AF273840-1|AAG15187.1| 553|Caenorhabditis elegans sex-1 protein.
Length = 553
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 241 LRVHTKRAALEKINLKFITPRPSSVMVDSRRRLTRLHSW 125
LR HT + I ++ I RP +V ++ ++ RL++W
Sbjct: 258 LRAHTTFSFYTDIKIRSIVARPFNVRINEDSKMNRLNAW 296
>AF049869-1|AAC77795.1| 556|Caenorhabditis elegans SEX-1 protein.
Length = 556
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 241 LRVHTKRAALEKINLKFITPRPSSVMVDSRRRLTRLHSW 125
LR HT + I ++ I RP +V ++ ++ RL++W
Sbjct: 261 LRAHTTFSFYTDIKIRSIVARPFNVRINEDSKMNRLNAW 299
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Frame = +3
Query: 9 FFFALSNVYFHGRHLRLRSSRWGCGSRSFF--ANTILLE---CTH 128
+F + VY+ R +++ +SRWG S F A+T+L+ C H
Sbjct: 279 YFVCMIYVYYSSRKIQMVASRWGLAFASSFTVASTLLMTTGICAH 323
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 371 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 496
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,758,395
Number of Sequences: 27780
Number of extensions: 407239
Number of successful extensions: 1072
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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