Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M16
         (823 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    42   0.004
BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   5.0  
Y12643-1|CAA73190.1|  486|Homo sapiens methyl-CpG binding protei...    31   6.7  
X99686-1|CAA68001.1|  486|Homo sapiens methyl-CpG-binding protei...    31   6.7  
X94628-1|CAA64331.1|  477|Homo sapiens  methyl-CpG-binding prote...    31   6.7  
X89430-1|CAA61599.1|  476|Homo sapiens methyl CpG binding protei...    31   6.7  
L37298-1|AAC32737.1|  486|Homo sapiens methyl-CpG-binding protei...    31   6.7  
BX538060-1|CAD97991.1|  516|Homo sapiens hypothetical protein pr...    31   6.7  
BC011612-1|AAH11612.1|  486|Homo sapiens methyl CpG binding prot...    31   6.7  
AY541280-1|AAS55455.1|  498|Homo sapiens methyl CpG binding prot...    31   6.7  
AJ132917-1|CAB46446.1|  486|Homo sapiens Methyl-CpG-binding prot...    31   6.7  
AF158180-1|AAF33023.1|  486|Homo sapiens methyl CpG binding prot...    31   6.7  
AF030876-2|AAC08757.1|  486|Homo sapiens Methyl-CpG binding prot...    31   6.7  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   8.8  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   8.8  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 41.5 bits (93), Expect = 0.004
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +1

Query: 577 MIGRADIEGSKSNVAMNAW 633
           MIGRADIEGSKS+VAMNAW
Sbjct: 1   MIGRADIEGSKSDVAMNAW 19


>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 26  AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 160
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>Y12643-1|CAA73190.1|  486|Homo sapiens methyl-CpG binding protein 2
           protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>X99686-1|CAA68001.1|  486|Homo sapiens methyl-CpG-binding protein 2
           protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>X94628-1|CAA64331.1|  477|Homo sapiens  methyl-CpG-binding protein
           protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 14  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 47


>X89430-1|CAA61599.1|  476|Homo sapiens methyl CpG binding protein 2
           protein.
          Length = 476

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 14  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 47


>L37298-1|AAC32737.1|  486|Homo sapiens methyl-CpG-binding protein
           protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>BX538060-1|CAD97991.1|  516|Homo sapiens hypothetical protein
           protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 53  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 86


>BC011612-1|AAH11612.1|  486|Homo sapiens methyl CpG binding protein
           2 (Rett syndrome) protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>AY541280-1|AAS55455.1|  498|Homo sapiens methyl CpG binding protein
           2 isoform B protein.
          Length = 498

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 35  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 68


>AJ132917-1|CAB46446.1|  486|Homo sapiens Methyl-CpG-binding protein
           2 protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>AF158180-1|AAF33023.1|  486|Homo sapiens methyl CpG binding protein
           2 protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>AF030876-2|AAC08757.1|  486|Homo sapiens Methyl-CpG binding protein
           2 protein.
          Length = 486

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +3

Query: 579 DRKSRHRRIKKQRRYERLGCHKPVIPGGNFSGPP 680
           D+  + +++KK ++ E+ G H+PV P  + S  P
Sbjct: 23  DKPLKFKKVKKDKKEEKEGKHEPVQPSAHHSAEP 56


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 353 TPLRPKPA*PNPARICSLWSPESRE 279
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 353 TPLRPKPA*PNPARICSLWSPESRE 279
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,891,827
Number of Sequences: 237096
Number of extensions: 2628342
Number of successful extensions: 5803
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5796
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)