Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M15
(842 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 31 6.9
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 31 6.9
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 31 6.9
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 31 6.9
Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V) pr... 30 9.1
X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for ... 30 9.1
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 30 9.1
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 30 9.1
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 30 9.1
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 30 9.1
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 30 9.1
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 628 PGTNGDRXARXPXXXPGGXXGXGGLGGXSLXAXPDRPPXXAGS 500
PG G+R A+ P G G G G + A P+ PP AGS
Sbjct: 735 PGAKGERGAKGPKGE-NGVVGPTGPVGAAGPAGPNGPPGPAGS 776
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 628 PGTNGDRXARXPXXXPGGXXGXGGLGGXSLXAXPDRPPXXAGS 500
PG G+R A+ P G G G G + A P+ PP AGS
Sbjct: 735 PGAKGERGAKGPKGE-NGVVGPTGPVGAAGPAGPNGPPGPAGS 776
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 628 PGTNGDRXARXPXXXPGGXXGXGGLGGXSLXAXPDRPPXXAGS 500
PG G+R A+ P G G G G + A P+ PP AGS
Sbjct: 735 PGAKGERGAKGPKGE-NGVVGPTGPVGAAGPAGPNGPPGPAGS 776
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 30.7 bits (66), Expect = 6.9
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 628 PGTNGDRXARXPXXXPGGXXGXGGLGGXSLXAXPDRPPXXAGS 500
PG G+R A+ P G G G G + A P+ PP AGS
Sbjct: 555 PGAKGERGAKGPKGE-NGVVGPTGPVGAAGPAGPNGPPGPAGS 596
>Y14690-1|CAA75002.1| 1496|Homo sapiens procollagen alpha 2(V)
protein.
Length = 1496
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 628 PGTNGDRXARXPXXXPGGXXGXGGLGGXSLXAXPDRPPXXAGS 500
PG++G R P PGG G G G PD PP AG+
Sbjct: 944 PGSHGRVGVRGPAGPPGG-PGDKGDPGEDGQPGPDGPPGPAGT 985
>X04758-1|CAA28454.1| 1099|Homo sapiens protein ( Human mRNA for
pro-alpha 2 (V) collagen chain. ).
Length = 1099
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -2
Query: 628 PGTNGDRXARXPXXXPGGXXGXGGLGGXSLXAXPDRPPXXAGS 500
PG++G R P PGG G G G PD PP AG+
Sbjct: 547 PGSHGRVGVRGPAGPPGG-PGDKGDPGEDGQPGPDGPPGPAGT 588
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 504 PAXXGGLSGXAXNXXPPRPPXPXXPPGXXXGXRAXLSPXVPGARXP 641
P GL G PP PP P PPG G L P P P
Sbjct: 444 PPGMPGLRGPLPRLLPPGPP-PGRPPGPPPGPPPGLPPGPPPRGPP 488
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 504 PAXXGGLSGXAXNXXPPRPPXPXXPPGXXXGXRAXLSPXVPGARXP 641
P GL G PP PP P PPG G L P P P
Sbjct: 203 PPGMPGLRGPLPRLLPPGPP-PGRPPGPPPGPPPGLPPGPPPRGPP 247
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 504 PAXXGGLSGXAXNXXPPRPPXPXXPPGXXXGXRAXLSPXVPGARXP 641
P GL G PP PP P PPG G L P P P
Sbjct: 444 PPGMPGLRGPLPRLLPPGPP-PGRPPGPPPGPPPGLPPGPPPRGPP 488
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 504 PAXXGGLSGXAXNXXPPRPPXPXXPPGXXXGXRAXLSPXVPGARXP 641
P GL G PP PP P PPG G L P P P
Sbjct: 444 PPGMPGLRGPLPRLLPPGPP-PGRPPGPPPGPPPGLPPGPPPRGPP 488
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 30.3 bits (65), Expect = 9.1
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 504 PAXXGGLSGXAXNXXPPRPPXPXXPPGXXXGXRAXLSPXVPGARXP 641
P GL G PP PP P PPG G L P P P
Sbjct: 444 PPGMPGLRGPLPRLLPPGPP-PGRPPGPPPGPPPGLPPGPPPRGPP 488
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,163,728
Number of Sequences: 237096
Number of extensions: 1359571
Number of successful extensions: 8524
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7674
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10649685938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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