Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M12
         (835 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021997-1|AAH21997.1|  619|Homo sapiens zinc finger protein 668...    31   5.1  
AK027398-1|BAB55084.1|  619|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AK023541-1|BAB14602.1|  498|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AB209710-1|BAD92947.1|  624|Homo sapiens Hypothetical protein FL...    31   5.1  
Y08262-1|CAA69589.1|  914|Homo sapiens SCA2 protein.                   31   6.8  
U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.               31   6.8  
BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.        31   6.8  
BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.        31   6.8  
BC053671-1|AAH53671.1| 1056|Homo sapiens SH3RF1 protein protein.       31   6.8  
BC033203-1|AAH33203.1|  546|Homo sapiens SH3RF1 protein protein.       31   6.8  
AK021429-1|BAB13822.1|  712|Homo sapiens protein ( Homo sapiens ...    31   6.8  
AB040927-1|BAA96018.1|  638|Homo sapiens KIAA1494 protein protein.     31   6.8  
BC002448-1|AAH02448.1|  401|Homo sapiens ABLIM1 protein protein.       30   9.0  
AL354873-1|CAI10906.1|  651|Homo sapiens actin binding LIM prote...    30   9.0  
AL137724-1|CAB70894.1|  439|Homo sapiens hypothetical protein pr...    30   9.0  
AL133384-9|CAI40135.1|  455|Homo sapiens actin binding LIM prote...    30   9.0  
AL133384-8|CAI40136.1|  401|Homo sapiens actin binding LIM prote...    30   9.0  
AL133384-4|CAI40131.1|  651|Homo sapiens actin binding LIM prote...    30   9.0  
AC078834-1|AAS01989.1|  439|Homo sapiens unknown protein.              30   9.0  

>BC021997-1|AAH21997.1|  619|Homo sapiens zinc finger protein 668
           protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1

Query: 598 KEFAPGXSLRCHQRLHQRISPPRHWAWLKGFRPL 497
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264


>AK027398-1|BAB55084.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14492 fis, clone MAMMA1002937, weakly similar to
           ZINC FINGER PROTEIN 135. ).
          Length = 619

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1

Query: 598 KEFAPGXSLRCHQRLHQRISPPRHWAWLKGFRPL 497
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 231 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 264


>AK023541-1|BAB14602.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13479 fis, clone PLACE1003738, weakly similar to
           ZINC FINGER PROTEIN 135. ).
          Length = 498

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1

Query: 598 KEFAPGXSLRCHQRLHQRISPPRHWAWLKGFRPL 497
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 110 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 143


>AB209710-1|BAD92947.1|  624|Homo sapiens Hypothetical protein
           FLJ14492 variant protein.
          Length = 624

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1

Query: 598 KEFAPGXSLRCHQRLHQRISPPRHWAWLKGFRPL 497
           K F+   SL CHQR+H    P R  A  KGF  L
Sbjct: 236 KSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQL 269


>Y08262-1|CAA69589.1|  914|Homo sapiens SCA2 protein.
          Length = 914

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 671 NPRFHTPTTPRLNIHFHQSSDAVXEGVRAGVKP--PLSSEAPSAYLTPSSLGMAKGVSP 501
           +P+ H P +PR N   +  S  V    +AG+ P   ++   P+A  TP+S    + V+P
Sbjct: 603 SPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTP 661


>U70323-1|AAB19200.1| 1312|Homo sapiens ataxin-2 protein.
          Length = 1312

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 671 NPRFHTPTTPRLNIHFHQSSDAVXEGVRAGVKP--PLSSEAPSAYLTPSSLGMAKGVSP 501
           +P+ H P +PR N   +  S  V    +AG+ P   ++   P+A  TP+S    + V+P
Sbjct: 683 SPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTP 741


>BC114546-1|AAI14547.1| 1006|Homo sapiens ATXN2 protein protein.
          Length = 1006

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 671 NPRFHTPTTPRLNIHFHQSSDAVXEGVRAGVKP--PLSSEAPSAYLTPSSLGMAKGVSP 501
           +P+ H P +PR N   +  S  V    +AG+ P   ++   P+A  TP+S    + V+P
Sbjct: 395 SPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTP 453


>BC111757-1|AAI11758.1| 1127|Homo sapiens ATXN2 protein protein.
          Length = 1127

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 671 NPRFHTPTTPRLNIHFHQSSDAVXEGVRAGVKP--PLSSEAPSAYLTPSSLGMAKGVSP 501
           +P+ H P +PR N   +  S  V    +AG+ P   ++   P+A  TP+S    + V+P
Sbjct: 473 SPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASNRAVTP 531


>BC053671-1|AAH53671.1| 1056|Homo sapiens SH3RF1 protein protein.
          Length = 1056

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPLS--SEAPSAYLTPSSLGMAKGVSPPYFQV 486
           H  T+P+  +  H +        R  V+   +   E P+A +TP  +  A G+SP    +
Sbjct: 732 HIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGL 791

Query: 485 NDESQAS----RLISRHSTHT 435
           +  S AS     L+   +THT
Sbjct: 792 SHHSLASPQPAPLMPGSATHT 812


>BC033203-1|AAH33203.1|  546|Homo sapiens SH3RF1 protein protein.
          Length = 546

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPLS--SEAPSAYLTPSSLGMAKGVSPPYFQV 486
           H  T+P+  +  H +        R  V+   +   E P+A +TP  +  A G+SP    +
Sbjct: 392 HIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGL 451

Query: 485 NDESQAS----RLISRHSTHT 435
           +  S AS     L+   +THT
Sbjct: 452 SHHSLASPQPAPLMPGSATHT 472


>AK021429-1|BAB13822.1|  712|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11367 fis, clone HEMBA1000303, highly similar to
           Mus musculus Plenty of SH3s (POSH) mRNA. ).
          Length = 712

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPLS--SEAPSAYLTPSSLGMAKGVSPPYFQV 486
           H  T+P+  +  H +        R  V+   +   E P+A +TP  +  A G+SP    +
Sbjct: 564 HIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGL 623

Query: 485 NDESQAS----RLISRHSTHT 435
           +  S AS     L+   +THT
Sbjct: 624 SHHSLASPQPAPLMPGSATHT 644


>AB040927-1|BAA96018.1|  638|Homo sapiens KIAA1494 protein protein.
          Length = 638

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPLS--SEAPSAYLTPSSLGMAKGVSPPYFQV 486
           H  T+P+  +  H +        R  V+   +   E P+A +TP  +  A G+SP    +
Sbjct: 314 HIQTSPQAKVLLHMTGQMTVNQARNAVRTVAAHNQERPTAAVTPIQVQNAAGLSPASVGL 373

Query: 485 NDESQAS----RLISRHSTHT 435
           +  S AS     L+   +THT
Sbjct: 374 SHHSLASPQPAPLMPGSATHT 394


>BC002448-1|AAH02448.1|  401|Homo sapiens ABLIM1 protein protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPL-SSEAPSAYLTPSSLGMAKGVSPPYFQVN 483
           +TPTT R   HFH+      +G+    KPP+    A  A  + SS  + K    P  Q  
Sbjct: 124 YTPTTSRSPQHFHRPD----QGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKFPAAQAP 179

Query: 482 DESQASRLISRH 447
           D S+  ++ + H
Sbjct: 180 DPSETPKIETDH 191


>AL354873-1|CAI10906.1|  651|Homo sapiens actin binding LIM protein
           1 protein.
          Length = 651

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPL-SSEAPSAYLTPSSLGMAKGVSPPYFQVN 483
           +TPTT R   HFH+      +G+    KPP+    A  A  + SS  + K    P  Q  
Sbjct: 374 YTPTTSRSPQHFHRPD----QGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKFPAAQAP 429

Query: 482 DESQASRLISRH 447
           D S+  ++ + H
Sbjct: 430 DPSETPKIETDH 441


>AL137724-1|CAB70894.1|  439|Homo sapiens hypothetical protein
           protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -1

Query: 709 PPLXXRXHQPDHQIPDSIHQPPP 641
           PP     HQP HQ P   HQPPP
Sbjct: 46  PPQHQPPHQPPHQPPPQ-HQPPP 67


>AL133384-9|CAI40135.1|  455|Homo sapiens actin binding LIM protein
           1 protein.
          Length = 455

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPL-SSEAPSAYLTPSSLGMAKGVSPPYFQVN 483
           +TPTT R   HFH+      +G+    KPP+    A  A  + SS  + K    P  Q  
Sbjct: 178 YTPTTSRSPQHFHRPD----QGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKFPAAQAP 233

Query: 482 DESQASRLISRH 447
           D S+  ++ + H
Sbjct: 234 DPSETPKIETDH 245


>AL133384-8|CAI40136.1|  401|Homo sapiens actin binding LIM protein
           1 protein.
          Length = 401

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPL-SSEAPSAYLTPSSLGMAKGVSPPYFQVN 483
           +TPTT R   HFH+      +G+    KPP+    A  A  + SS  + K    P  Q  
Sbjct: 124 YTPTTSRSPQHFHRPD----QGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKFPAAQAP 179

Query: 482 DESQASRLISRH 447
           D S+  ++ + H
Sbjct: 180 DPSETPKIETDH 191


>AL133384-4|CAI40131.1|  651|Homo sapiens actin binding LIM protein
           1 protein.
          Length = 651

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -3

Query: 659 HTPTTPRLNIHFHQSSDAVXEGVRAGVKPPL-SSEAPSAYLTPSSLGMAKGVSPPYFQVN 483
           +TPTT R   HFH+      +G+    KPP+    A  A  + SS  + K    P  Q  
Sbjct: 374 YTPTTSRSPQHFHRPD----QGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKFPAAQAP 429

Query: 482 DESQASRLISRH 447
           D S+  ++ + H
Sbjct: 430 DPSETPKIETDH 441


>AC078834-1|AAS01989.1|  439|Homo sapiens unknown protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = -1

Query: 709 PPLXXRXHQPDHQIPDSIHQPPP 641
           PP     HQP HQ P   HQPPP
Sbjct: 46  PPQHQPPHQPPHQPPPQ-HQPPP 67


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,982,643
Number of Sequences: 237096
Number of extensions: 2350297
Number of successful extensions: 5966
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5954
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)