Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M12
         (835 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    28   7.2  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.5  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.5  

>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
           protein Y53C10A.10 protein.
          Length = 1582

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -3

Query: 620 QSSDAVXEGVRAGVKPPLSSEAPSAYLTPSSLGMAKGVSPPYFQVNDESQASRLISRHST 441
           ++S    EG    ++   SS +PS + TP  +G    VS    Q +  S +S   +   T
Sbjct: 727 KTSTVTSEGTTLSIESTESSASPSDFTTPDFIGFTSSVSRTSEQYSSSSPSSDTTTMDVT 786

Query: 440 HT 435
            T
Sbjct: 787 ST 788


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 727 PYASSHPPLXXRXHQPDHQIPDS 659
           P +S HPPL    H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 572  PLSSEAPSAYLTPSSLGMAKGVSPP 498
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 572  PLSSEAPSAYLTPSSLGMAKGVSPP 498
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,461,819
Number of Sequences: 27780
Number of extensions: 335922
Number of successful extensions: 974
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)