Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M06
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 4e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 6e-04
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 36 0.006
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.010
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.041
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.22
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.29
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.43
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 28 1.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 2.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.3
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 43.6 bits (98), Expect = 4e-05
Identities = 34/121 (28%), Positives = 35/121 (28%), Gaps = 9/121 (7%)
Frame = +3
Query: 552 APHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXPXXXPXA-------PPXPXPXHXPXXXX 710
AP P P + PP P R P P PP P P P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Query: 711 XXXPXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPP--PQXPPXPXXXPPX 884
P P P PS P PLP PP PP P PP P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAP--PLPAGMPAAPPLPPAAPAPPPAPAPAPAA 486
Query: 885 P 887
P
Sbjct: 487 P 487
Score = 40.3 bits (90), Expect = 4e-04
Identities = 31/116 (26%), Positives = 33/116 (28%), Gaps = 4/116 (3%)
Frame = +3
Query: 555 PHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXXPXXQX 734
P P P P P+ P R P APP P +
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSN--PPAPPPAIPGRSAPALPPLGNASRT 412
Query: 735 PPPPXXXXXXXXXSPSXXXPPKXP--LPWXPXXXPPXPP--PQXPPXPXXXPPXPP 890
PP S PP P LP PP PP P PP P P PP
Sbjct: 413 STPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 39.9 bits (89), Expect = 5e-04
Identities = 29/106 (27%), Positives = 30/106 (28%), Gaps = 2/106 (1%)
Frame = +3
Query: 579 PXXPXXXPTPPPXPXXXXXXRXXPXXXPXAPPXPXPX--HXPXXXXXXXPXXQXPPPPXX 752
P P PPP P R P PP P P P P
Sbjct: 352 PLPPQGRSAPPPPPP-----RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL 406
Query: 753 XXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPPXPP 890
+P PP P P P PP PP P PP PP
Sbjct: 407 GNASRTSTPPVPTPPSLP-PSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 32.7 bits (71), Expect = 0.072
Identities = 24/94 (25%), Positives = 25/94 (26%), Gaps = 4/94 (4%)
Frame = +1
Query: 541 PXPPPP----TXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTPPXXX 708
P PPPP +P P PPPPP PP PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP-APPPAIP 396
Query: 709 XXXHPXXXPPXRPXXXXXXXXXPPPXXXPPXPPS 810
P P PP P PPS
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAP 621
P PP +P P P P PPPAP
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.5 bits (63), Expect = 0.67
Identities = 25/102 (24%), Positives = 26/102 (25%), Gaps = 5/102 (4%)
Frame = +3
Query: 600 PTPPPXPXXXXXXRXXPXXXPXAPPXPXPXHX--PXXXXXXXPXXQXPPPPXXXXXXXXX 773
P PPP P PP P + P PPPP
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS 350
Query: 774 SPSXXXPPKXPLPWXPXXXPPX---PPPQXPPXPXXXPPXPP 890
P P P P P PPP PP PP
Sbjct: 351 IPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/94 (21%), Positives = 21/94 (22%)
Frame = +3
Query: 579 PXXPXXXPTPPPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXXPXXQXPPPPXXXX 758
P P PP P R P PP P P + P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPA 283
Query: 759 XXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPP 860
P P PPP PP
Sbjct: 284 INSTSKPPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 27.1 bits (57), Expect = 3.6
Identities = 22/90 (24%), Positives = 22/90 (24%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTPPXXXXXXH 720
P PP P P PPP P S P P P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 721 PXXXPPXRPXXXXXXXXXPPPXXXPPXPPS 810
P P R P PP PPS
Sbjct: 291 PLPPPSSRVSAAALAANKKRP--PPPPPPS 318
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/56 (26%), Positives = 17/56 (30%)
Frame = +2
Query: 644 PPXXTXXSPPXPXPXPXPPRXPXXXTXTXXPPXAPXXXXRXXXXPLPXPXPQXPPP 811
P T SPP P P P + P P R L + PPP
Sbjct: 259 PSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.3 bits (90), Expect = 4e-04
Identities = 35/128 (27%), Positives = 37/128 (28%), Gaps = 14/128 (10%)
Frame = +3
Query: 549 PAPHXXXXPXPXXPXXXPTP---PPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXX 719
P+ P P P P PP P P PP P P P
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPK--- 1125
Query: 720 PXXQXPPPPXXXXXXXXXSPSXXXPP------KXPLPWXPXXXPPXPPPQ--XPPXP--- 866
P PP P PS PP P+P PP P P PP P
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 867 XXXPPXPP 890
PP PP
Sbjct: 1186 AGVPPVPP 1193
Score = 39.9 bits (89), Expect = 5e-04
Identities = 31/119 (26%), Positives = 31/119 (26%), Gaps = 5/119 (4%)
Frame = +3
Query: 549 PAPHXXXXPXPXXPXXXPTPPPX---PXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXX 719
P P P P P P P P P P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 720 PXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQ--XPPXPXXXPPXPP 890
P PP P PS PP P P PP P P PP P PP
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPP----PSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/92 (25%), Positives = 23/92 (25%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTPPXXXXXXH 720
P P L P P PP P PP P TPP
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG 1058
Query: 721 PXXXPPXRPXXXXXXXXXPPPXXXPPXPPSPG 816
PP P P P PP P G
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Score = 35.1 bits (77), Expect = 0.014
Identities = 30/108 (27%), Positives = 32/108 (29%), Gaps = 5/108 (4%)
Frame = +3
Query: 579 PXXPXXXPTPPPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXXPXXQXPPPPXXXX 758
P P PP P P APP P P P PPP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPST-APPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 759 XXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQX--PPXPXX---XPPXP 887
P+ P P+P P PP P P PP P PP P
Sbjct: 1071 SEIPSIPAPSGAP--PVP-APSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 31.9 bits (69), Expect = 0.13
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTPPXXXXXXH 720
P P PT P PPP P S PP P PP
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK---- 1096
Query: 721 PXXXPPXRPXXXXXXXXXPPPXXXPPXP 804
P P P P P PP P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 31.9 bits (69), Expect = 0.13
Identities = 21/82 (25%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Frame = +2
Query: 647 PXXTXXSPPXPXPXPXPPRXPXXXTXTXX-PPXA---PXXXXRXXXXPLPXPXPQXPPPL 814
P + +PP P P P P PP + P P+P P P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 815 GAXXXXPXPPPSXXPXPXXXPS 880
+ P P P+ P PS
Sbjct: 1222 PSAGLPPVPVPTAKAPPVPAPS 1243
Score = 31.5 bits (68), Expect = 0.17
Identities = 23/79 (29%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +2
Query: 647 PXXTXXSPPXPXPXPXPPRXPXXXTXTXXPPXAPXXXXRXXXXPLPXPXPQXPP-PLGAX 823
P + +P P P P P P AP P+P P PP P +
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSE---IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 824 XXXPXPPPSXXPXPXXXPS 880
P P PS P P PS
Sbjct: 1110 AVPPVPAPSGAP-PVPKPS 1127
Score = 30.7 bits (66), Expect = 0.29
Identities = 27/105 (25%), Positives = 29/105 (27%), Gaps = 13/105 (12%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPP------PPAPXXXXXXXSXXXXXLXPPXXPPXXTPPX 702
P P P+ +P P P P PP P PP P PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 703 XXXXXHPXXXP------PXRPXXXXXXXXXPPPXXXPPXP-PSPG 816
P P P PPP PP P PS G
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Frame = +3
Query: 660 PXAPPXPXPXHXPXXXXXXXPXXQXP---PPPXXXXXXXXXSPSXXXPPKXPLPWXPXXX 830
P APP P P P + P PP SP+ P+P
Sbjct: 963 PAAPPS-IPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKA 1021
Query: 831 PPXPPPQXP----PXPXXXPPXP 887
PP P P P P PP P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVP 1044
Score = 28.3 bits (60), Expect = 1.6
Identities = 30/108 (27%), Positives = 31/108 (28%), Gaps = 3/108 (2%)
Frame = +3
Query: 573 PXPXXPXXXPTPPPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXXPXXQXPPPPXX 752
P P P P P P P P P P P P + PP P
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEP---PKDHPPSAPLSKPVSTSPAAPLARVPPVPKL 1017
Query: 753 XXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXP---PXPXXXPPXP 887
S PP PLP PP P P P P PP P
Sbjct: 1018 ---------SSKAPP-VPLP--SADAPPIPVPSTAPPVPIPTSTPPVP 1053
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/80 (26%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Frame = +3
Query: 660 PXAPPXPXPXHXPXXXXXXXPXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPX 839
P A P P P PP P P+ P P PP
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV 1066
Query: 840 PPP--QXP--PXPXXXPPXP 887
P P + P P P PP P
Sbjct: 1067 PAPSSEIPSIPAPSGAPPVP 1086
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/57 (26%), Positives = 16/57 (28%)
Frame = +3
Query: 720 PXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPPXPP 890
P P P P PP PL P P + PP P PP
Sbjct: 967 PSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPP 1023
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXP-PPPPAPXXXXXXXSXXXXXLXPP-XXPPXXTP 696
P P P+ +P P P PPP+ S + PP PP TP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/71 (26%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Frame = +2
Query: 665 SPPXPXPXPXPPRXPXXXTXTXXP-PXA---PXXXXRXXXXPLPXPXPQXPPPLGAXXXX 832
+PP P P P P T P P A P P+P P + P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSV 1256
Query: 833 PXPPPSXXPXP 865
P P + P P
Sbjct: 1257 PSPHSNASPSP 1267
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.5 bits (88), Expect = 6e-04
Identities = 27/89 (30%), Positives = 27/89 (30%)
Frame = -3
Query: 877 GXXXGXGGX*GGGXGGXXXGXQGRGXLGGXXXEGXXXXSXXXXXGGGGXXXXGXXXXXXX 698
G G G GGG GG G G G GG EG GG G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 697 GXWXGXGXGGAXGXXXGXXRXXXXXXGXG 611
G G GG G G G G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 36.7 bits (81), Expect = 0.004
Identities = 28/89 (31%), Positives = 29/89 (32%)
Frame = -2
Query: 806 GGFGGXXXGGGXXXXXXXXXGRXGGLXXGXXXXXXXGGVXWGGXXGGXRXXXXXXXXXXX 627
GGFGG G G G GG GG +GG GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG--FGGGPGGFE--GGPGGFGGG 243
Query: 626 XXGAGGGGGXXXGXXGXXGXXXVGGGGXG 540
G GGG G G G G G GG G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -3
Query: 889 GGXGGXXXGXGGX*GGGXGGXXXGXQGRGXLG 794
GG GG G GG GGG GG G G G G
Sbjct: 242 GGPGGFGGGLGGF-GGGPGGFGGGPGGHGGPG 272
Score = 29.5 bits (63), Expect = 0.67
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -3
Query: 889 GGXGGXXXGXGGX*GGGXGGXXXGXQGRGXLGGXXXEGXXXXSXXXXXGGGGXXXXG 719
GG G G GG GGG GG G G G G G GGG G
Sbjct: 214 GGEGHHHGGHGGF-GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -3
Query: 889 GGXGGXXXGXGGX*GGGXGGXXXGXQGRGXLGG 791
GG GG G GG GGG GG G GRG G
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 889 GGXGGXXXGXGGX*GGGXGGXXXGXQGRGXLGG 791
GG GG G GG GG GG GRG G
Sbjct: 38 GGRGGARGGRGGR-GGARGGRGGSSGGRGGAKG 69
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 876 GXXXGXGXXEGGGXGXXXXAPRGGGXWGXGXGRGXXXXRXXXXGAXGG 733
G G G GGG G RGG G G G R G GG
Sbjct: 20 GFNGGRGGF-GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 876 GXXXGXGXXEGGGXGXXXXAPRGGGXWGXGXGRGXXXXRXXXXGAXGGXXVXV 718
G G G GG G RGG G G GA GG V +
Sbjct: 23 GGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVII 75
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.010
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = +3
Query: 666 APPXPXPXHXPXXXXXXXPXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPP 845
APP P P P PPP S + P P P P P P
Sbjct: 129 APPTPQSELRPPTSAPPRPSI---PPPSPASAPPIPSKAPPIPSSLPPPAQP-AAPVKSP 184
Query: 846 PQXPPXPXXXPPXPP 890
P P P PP PP
Sbjct: 185 PSAPSLPSAVPPMPP 199
Score = 33.1 bits (72), Expect = 0.055
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 2/88 (2%)
Frame = +3
Query: 600 PTPPPXPXXXXXXRXXPXXXPXAP--PXPXPXHXPXXXXXXXPXXQXPPPPXXXXXXXXX 773
P P P P P P P P P P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 774 SPSXXXPPKXPLPWXPXXXPPXPPPQXP 857
PS P +P P PP P Q P
Sbjct: 184 PPSAPSLPS-AVPPMPPKVPPPPLSQAP 210
Score = 32.3 bits (70), Expect = 0.095
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTPPXXXXXXH 720
P PP P L P PPP+P S P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP--IPSSLPPPAQPAA------ 179
Query: 721 PXXXPPXRPXXXXXXXXXPPPXXXPPXPPSP 813
P PP P PP PP +P
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 30.7 bits (66), Expect = 0.29
Identities = 31/126 (24%), Positives = 34/126 (26%), Gaps = 12/126 (9%)
Frame = +3
Query: 549 PAPHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXXP-- 722
P P P P PPP P P + P P P P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSL 190
Query: 723 -------XXQXPPPPXXXXXXXXXS--PSXXXPPKXPLPWXPXXXPPXPPPQXPPXP-XX 872
+ PPPP S PS PP P P P + P P
Sbjct: 191 PSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKF-PNRGPSIPSAS 249
Query: 873 XPPXPP 890
PP PP
Sbjct: 250 VPPVPP 255
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 777 PSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPPXP 887
PS PP P P P PP P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/49 (26%), Positives = 16/49 (32%)
Frame = +3
Query: 735 PPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPP 881
P P P PP+ +P P P + PP P PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.041
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 735 PPPPXXXXXXXXXSPSXXX-PPKXPLPWXPXXXPPXPPPQXPPXPXXXPPXPP 890
PPPP +P+ PP P+ P PP PPP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGP---PPPPPPPGVAGAGPPPPPPP 781
Score = 33.1 bits (72), Expect = 0.055
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTPP 699
P PPPP +P P P PPPAP + PP PP
Sbjct: 732 PPPPPPAVIVP--TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 695 PPRXPXXXTXTXXPPXAPXXXXRXXXXPLPXPXPQXPPPLGAXXXXPXPPPSXXP 859
PP P T P P P+ P PPP G P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPA----PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.67
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 603 TPPPXPXXXXXXRXXPXXXPXAPPXPXPXHXPXXXXXXXPXXQXPPPP 746
+PPP P P P PP P P PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 29.5 bits (63), Expect = 0.67
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +2
Query: 644 PPXXTXXSPPXPXPXPXPPRXPXXXTXTXXPPXAPXXXXRXXXXPLPXPXPQXPPPLGAX 823
PP P P P P P P PP P P P P P G+
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG-GSR 791
Query: 824 XXXPXPPPSXXP 859
P P P
Sbjct: 792 YYAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 0.89
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 5/74 (6%)
Frame = +3
Query: 540 SXXPAPHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXP-----XXXPXAPPXPXPXHXPXX 704
S P P P P P P PPP P P P PP P P
Sbjct: 731 SPPPPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Query: 705 XXXXXPXXQXPPPP 746
P Q P P
Sbjct: 790 SRYYAPAPQAEPEP 803
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPA 618
P PPPP P P PPPPPA
Sbjct: 762 PPPPPPPGVAGAGPPPP---PPPPPA 784
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +3
Query: 648 PXXXPXAPPXPXPXHXPXXXXXXXPXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXX 827
P P A P P P P PPPP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP-PPPPPPPPAVSAGGS 790
Query: 828 XPPXPPPQXPPXP 866
P PQ P P
Sbjct: 791 RYYAPAPQAEPEP 803
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +1
Query: 604 PPPPAPXXXXXXXSXXXXXLXPP----XXPPXXTPPXXXXXXHPXXXPPXRP 747
PPPP P + + PP PP PP P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +3
Query: 777 PSXXXPPKXPLPWXPXXXPP---XPPPQXPPXPXXXPPXPP 890
P PP+ P P PP PPP PP P P PP
Sbjct: 1694 PQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 31.1 bits (67), Expect = 0.22
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPPAP 621
P PPPP +P P P PP AP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 29.9 bits (64), Expect = 0.51
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 553 PPTXXLPXXPXXPXXXPPPPPAPXXXXXXXSXXXXXLXPPXXPPXXTP 696
PP P P P PPPP AP S L P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 776 PLPXPXPQXPPPLGAXXXXPXPPPSXXPXP 865
P P P P PP + P PPS P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +3
Query: 720 PXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPPXP 887
P PP S PP P+ P PP PP P P PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP---PPSAPPM-PAGPPSAPPPP 1734
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 547 PPPPTXXLPXXPXXPXXXPPPP 612
PPPP+ P P P PPPP
Sbjct: 1715 PPPPSA--PPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 2/58 (3%)
Frame = +3
Query: 720 PXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXP--PPQXPPXPXXXPPXP 887
P P P +P+ PP P P PP P PP PP P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPP--PPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 777 PSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPPXP 887
P PP P P P PPP P P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +3
Query: 735 PPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPP 845
PPPP P PP P P P P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/113 (22%), Positives = 26/113 (23%), Gaps = 2/113 (1%)
Frame = +3
Query: 549 PAPHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXPXXX--PXAPPXPXPXHXPXXXXXXXP 722
P H P P PPP P P P P H P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 723 XXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPP 881
P P PP P+ P P PP P PP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/113 (22%), Positives = 26/113 (23%), Gaps = 2/113 (1%)
Frame = +3
Query: 549 PAPHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXPXXX--PXAPPXPXPXHXPXXXXXXXP 722
P H P P PPP P P P P H P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Query: 723 XXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPP 881
P P PP P+ P P PP P PP
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/113 (22%), Positives = 26/113 (23%), Gaps = 2/113 (1%)
Frame = +3
Query: 549 PAPHXXXXPXPXXPXXXPTPPPXPXXXXXXRXXPXXX--PXAPPXPXPXHXPXXXXXXXP 722
P H P P PPP P P P P H P
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Query: 723 XXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPPPQXPPXPXXXPP 881
P P PP P+ P P PP P PP
Sbjct: 289 PMHHEPGEHMPPPPMHHEPGEHMPPP-PMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 795 PKXPLPWXPXXXPPXPPPQXPPXPXXXP 878
P+ P + P P P P PP P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 819 PXXXPPXPPPQXPPXPXXXPPXPP 890
P P P Q P P PP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 25.8 bits (54), Expect(2) = 0.43
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 667 PPXXPPXXTPPXXXXXXHPXXXPPXRPXXXXXXXXXPPPXXXPPXPPSP 813
PP PP PP P PPP P PP P
Sbjct: 238 PPPPPPPTLPPQSTNTSQ-LPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
Score = 22.6 bits (46), Expect(2) = 0.43
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 547 PPPPTXXLPXXPXXPXXXPPPPPAP 621
PP P PPPPP P
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 819 PXXXPPXPPPQXPPXPXXXPPXPP 890
P PP PPP P PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 819 PXXXPPXPPPQXPPXPXXXPPXPP 890
P PP PPP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 831 PPXPPPQXPPXPXXXPPXPP 890
PP PPP P PP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 547 PPPPTXXLPXXPXXPXXXPPPPPAP 621
PPPP P P PPPPP P
Sbjct: 9 PPPPP---PPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 777 PSXXXPPKXPLPWXPXXXPPXPPP 848
P PP P + P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 541 PXPPPPTXXLPXXPXXPXXXPPPPP 615
P PPPP P P P PPPPP
Sbjct: 10 PPPPPPPGFEP--PSQPP--PPPPP 30
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 777 PSXXXPPKXPLPWXPXXXPPXPPP 848
P+ PP LP+ P PP PPP
Sbjct: 164 PNPAMPPIPFLPFNPAAQPPFPPP 187
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/77 (25%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Frame = +3
Query: 666 APPXPXPXHXPXXXXXXXPXXQXP---PPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPP 836
AP P P P P PP PS P + P+ P P
Sbjct: 434 APSNPAPWQQPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNA-PFIPGTSAP 492
Query: 837 XPPPQXPPXPXXXPPXP 887
PP P PP P
Sbjct: 493 LPPTTFAPPGVPLPPIP 509
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.3
Identities = 18/75 (24%), Positives = 19/75 (25%)
Frame = +3
Query: 666 APPXPXPXHXPXXXXXXXPXXQXPPPPXXXXXXXXXSPSXXXPPKXPLPWXPXXXPPXPP 845
APP P P P PP S + P PL P
Sbjct: 1881 APPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSSM 1940
Query: 846 PQXPPXPXXXPPXPP 890
P PP PP
Sbjct: 1941 PNAPPSVASNAKLPP 1955
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,861,358
Number of Sequences: 5004
Number of extensions: 29242
Number of successful extensions: 497
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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