Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP08_T7_M04
(925 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.043
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.057
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.099
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.13
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.13
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.40
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.93
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.2
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 28 2.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.8
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 2.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 2.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.5
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 26 8.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 797 PPXPLXRXPXPPNPPXRXXXXRPXPPPPIPP 889
PP P+ P PP PP P PPPP PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = +2
Query: 797 PPXPLXRXPXP-----PNPPXRXXXXRPXPPPPIPPXXXXXVPPXCP 922
PP P P P P PP P PPPP PP PP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-PPGVAGAGPPPPP 779
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 5/52 (9%)
Frame = +3
Query: 570 PPPPXXXXXLNPILAP-----RTPXXXXPXPXXPXPXLXXGAXPXXPPXXXP 710
PPPP P AP P P P P P + GA P PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGV-AGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 809 LXRXPXPPNPPXRXXXXRPXPPPPIPPXXXXXVPPXCP 922
L + P PP P P P P PP PP P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 797 PPXPLXRXPXPPNPPXRXXXXRPXPPPPIPPXXXXXVP 910
PP P P PP+ P PPPP+P VP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXR 847
AP P PP PP G + P PP P P PNP R
Sbjct: 1704 APTPPPPPMSVPPPPSAPPMPAGPPSAPP-------PPLPASSAPSVPNPGDR 1749
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 806 PLXRXPXPPNPPXRXXXXRPXPP--PPIPPXXXXXVPPXCP 922
P P PP PP P PP PP+P PP P
Sbjct: 1700 PQMSAPTPPPPPMSV----PPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.057
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPX 868
A PP P P + P PP P P P + P P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 869 PPPPIPPXXXXXVPPXCP 922
PP P VPP P
Sbjct: 182 KSPPSAPSLPSAVPPMPP 199
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/66 (27%), Positives = 19/66 (28%)
Frame = +2
Query: 692 PPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPXP 871
PP PP P A P P P P PP+ P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 872 PPPIPP 889
P PP
Sbjct: 199 PKVPPP 204
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/80 (26%), Positives = 23/80 (28%), Gaps = 3/80 (3%)
Frame = +2
Query: 683 PXAPPPXXPPXXX-PPTXXXXHAX--PGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXX 853
P AP P P PPT P A P P P P P +
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 854 XXRPXPPPPIPPXXXXXVPP 913
P P +PP PP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPP 204
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/61 (26%), Positives = 18/61 (29%)
Frame = +3
Query: 516 PXRPXPXXXXXPXRXXXTPPPPXXXXXLNPILAPRTPXXXXPXPXXPXPXLXXGAXPXXP 695
P P P R + PP +P AP P P P P A P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 696 P 698
P
Sbjct: 185 P 185
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.099
Identities = 26/114 (22%), Positives = 31/114 (27%), Gaps = 2/114 (1%)
Frame = +3
Query: 504 PVTXPXRPXPXXXXX-PXRXXXTPPPPXXXXXLNPILAPR-TPXXXXPXPXXPXPXLXXG 677
P P P P P PP P + P+ AP P P P + G
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 678 AXPXXPPXXXPPXXXXPXXXXXTXSPAXPRXXXXXXAXXXXPXPFXXPQXPPTP 839
A P P P P P+ + P P PP P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Score = 32.3 bits (70), Expect = 0.099
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPX 868
A PP P PP A P A PP P PP PP P
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI-----PPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 869 PPPPIPPXXXXXVPPXCP 922
P +PP P P
Sbjct: 1203 PSVGVPPVPPPSTAPPVP 1220
Score = 31.1 bits (67), Expect = 0.23
Identities = 25/114 (21%), Positives = 29/114 (25%), Gaps = 3/114 (2%)
Frame = +3
Query: 507 VTXPXRPXPXXXXXPXRXXXTPPPPXXXXXLNPILAPRTPXXXXPXPXX---PXPXLXXG 677
V P P P + PP P+ P P P P P G
Sbjct: 1128 VAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Query: 678 AXPXXPPXXXPPXXXXPXXXXXTXSPAXPRXXXXXXAXXXXPXPFXXPQXPPTP 839
P PP PP P P + P P + PP P
Sbjct: 1188 VPPVPPPSEAPPVPK-PSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPX 868
APP P PP P P PP P PP PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVP------PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 869 PPPPIPP 889
P +PP
Sbjct: 1222 PSAGLPP 1228
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/70 (28%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXP---GXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXX 859
APP P PP A P A P PP P PP P
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 860 RPXPPPPIPP 889
P P PP
Sbjct: 1161 VPKPSVAAPP 1170
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/80 (23%), Positives = 20/80 (25%)
Frame = +2
Query: 683 PXAPPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXR 862
P P P P P+ A P PP P PP P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 863 PXPPPPIPPXXXXXVPPXCP 922
P P PP P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVP 1162
Score = 26.2 bits (55), Expect = 6.5
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPX 868
A PP P PP A P P P P P P P +P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAP----PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Query: 869 PPPPIPPXXXXXVPP 913
P P +PP
Sbjct: 1166 VAAPPVPAPSSGIPP 1180
Score = 25.8 bits (54), Expect = 8.6
Identities = 19/72 (26%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Frame = +2
Query: 683 PXAPPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXX--PPXPLXRXPXPPNPPXRXXX 856
P + PP P P + + A P PP PL PP P
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 857 XRPXP--PPPIP 886
P P PP+P
Sbjct: 1042 PVPIPTSTPPVP 1053
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.13
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = -2
Query: 921 GXXGGTXXXXXGGMGGGGXGRXXXXRXGGLGGXGXRXRGXGGXXXXXXX---GXXAXXPG 751
G GG GG GG G GG GG G G GG G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 750 XAWXXXXVGGXXXGGXXGGGAXG 682
+GG G GG G
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPG 266
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.13
Identities = 22/78 (28%), Positives = 24/78 (30%)
Frame = +2
Query: 689 APPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPX 868
APPP PP P T P + PP + P PP
Sbjct: 360 APPPP-PPRSAPSTGRQ----PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 869 PPPPIPPXXXXXVPPXCP 922
PP P PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLP 432
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/82 (26%), Positives = 25/82 (30%), Gaps = 1/82 (1%)
Frame = +2
Query: 683 PXAPPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXR 862
P APPP P P +A P P PP+ P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 863 PXPP-PPIPPXXXXXVPPXCPL 925
P PP PI P +P PL
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPL 469
Score = 29.9 bits (64), Expect = 0.53
Identities = 21/84 (25%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Frame = +2
Query: 674 RRXPXAPPPXXPPXXXPPTXXXX-HAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRX 850
+R P PPP PP ++ P P P PP PP R
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 851 XXXRPXPPPPIPPXXXXXVPPXCP 922
PPP+ PP P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPP 392
Score = 29.9 bits (64), Expect = 0.53
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +2
Query: 683 PXAPPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXR 862
P + PP PP P A P P PP P PP PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA-----PPLPAGMPAAPPLPP-----AA 473
Query: 863 PXPPP-PIP 886
P PPP P P
Sbjct: 474 PAPPPAPAP 482
Score = 29.1 bits (62), Expect = 0.93
Identities = 40/156 (25%), Positives = 41/156 (26%), Gaps = 10/156 (6%)
Frame = +3
Query: 402 GRXXSXXPXXPXASRXXXSXXXGXXPXXXXXLVXPVTXPXRPXPXXXXXPX-----RXXX 566
G S P P R S G P P P R P P R
Sbjct: 330 GSSNSSLPPPPPPPR---SNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVS 386
Query: 567 TPP--PPXXXXXLNPILAPRTPXXXXPXPXXP-XPXLXXGAXPXXPPXXXP--PXXXXPX 731
PP PP P L P P P P L A P PP P P
Sbjct: 387 NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA 446
Query: 732 XXXXTXSPAXPRXXXXXXAXXXXPXPFXXPQXPPTP 839
+P P A P P P PP P
Sbjct: 447 PPLPPSAPIAPPLPAGMPA--APPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +2
Query: 707 PPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXRPXP-PPPI 883
PP PP+ A P P P P P PP+ P P PP+
Sbjct: 415 PPVPTPPSLPPS-APPSLPPSAPPSLPMGAPAAP----PLPPSAPIAPPLPAGMPAAPPL 469
Query: 884 PPXXXXXVPPXCP 922
PP P P
Sbjct: 470 PPAAPAPPPAPAP 482
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Frame = +2
Query: 800 PXPLXRXPXPPN-----PPXRXXXXRPXPPPPIPPXXXXXV--PPXCP 922
P P PP+ PP R PPPIPP V PP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 888 GGMGGGGXGRXXXXRXGGLGGXGXRXRGXGG 796
GG GGG G R G GG G R GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 0.93
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Frame = +2
Query: 692 PPPXX--PPXXXPPTXXXXHAXPGXXAXXPXXXXXXX---PPXPLXRXPXP--PNPPXRX 850
PPP P PP H PG P PP P+ P P PP
Sbjct: 209 PPPMHHKPGEHMPPPPM--HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 266
Query: 851 XXXRPXPPPPIPPXXXXXVPP 913
PPPP+ +PP
Sbjct: 267 EPGEHMPPPPMHHEPGEHMPP 287
Score = 29.1 bits (62), Expect = 0.93
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Frame = +2
Query: 692 PPPXX--PPXXXPPTXXXXHAXPGXXAXXPXXXXXXX---PPXPLXRXPXP--PNPPXRX 850
PPP P PP H PG P PP P+ P P PP
Sbjct: 222 PPPMHHEPGEHMPPPPM--HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 279
Query: 851 XXXRPXPPPPIPPXXXXXVPP 913
PPPP+ +PP
Sbjct: 280 EPGEHMPPPPMHHEPGEHMPP 300
Score = 29.1 bits (62), Expect = 0.93
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Frame = +2
Query: 692 PPPXX--PPXXXPPTXXXXHAXPGXXAXXPXXXXXXX---PPXPLXRXPXP--PNPPXRX 850
PPP P PP H PG P PP P+ P P PP
Sbjct: 235 PPPMHHEPGEHMPPPPM--HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 292
Query: 851 XXXRPXPPPPIPPXXXXXVPP 913
PPPP+ +PP
Sbjct: 293 EPGEHMPPPPMHHEPGEHMPP 313
Score = 29.1 bits (62), Expect = 0.93
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Frame = +2
Query: 692 PPPXX--PPXXXPPTXXXXHAXPGXXAXXPXXXXXXX---PPXPLXRXPXP--PNPPXRX 850
PPP P PP H PG P PP P+ P P PP
Sbjct: 248 PPPMHHEPGEHMPPPPM--HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 305
Query: 851 XXXRPXPPPPIPPXXXXXVPP 913
PPPP+ +PP
Sbjct: 306 EPGEHMPPPPMHHEPGEHMPP 326
Score = 29.1 bits (62), Expect = 0.93
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Frame = +2
Query: 692 PPPXX--PPXXXPPTXXXXHAXPGXXAXXPXXXXXXX---PPXPLXRXPXP--PNPPXRX 850
PPP P PP H PG P PP P+ P P PP
Sbjct: 261 PPPMHHEPGEHMPPPPM--HHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 318
Query: 851 XXXRPXPPPPIPPXXXXXVPP 913
PPPP+ +PP
Sbjct: 319 EPGEHMPPPPMHHEPGEHMPP 339
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +2
Query: 797 PPXPLXRXPXP--PNPPXRXXXXRPXPPPPIPPXXXXXVPP 913
PP P+ P P PP PPPP+ +PP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 248
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 806 PLXRXPXPPNPPXRXXXXRPXPPPP 880
P P PP PP +P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 821 PXPPNPPXRXXXXRPXPPPPIP 886
P PP PP PPPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 827 PPNPPXRXXXXRPXPPPPIPP 889
PP PP P PPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 827 PPNPPXRXXXXRPXPPPPIPP 889
PP PP PPPP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 610 SRPEPLXXXPPXLLXPXXXSSXAXXXXXPPXXXPRP 717
SRP PL P LL P S PP P P
Sbjct: 574 SRPSPLSLPPEPLLSPTIDYSATPFPLEPPPESPGP 609
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 797 PPXPLXRXPXPPNPPXRXXXXRPXPPPPIPPXXXXXVPPXCPL 925
P PL R P PN P PP P P +P PL
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPL 141
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 888 GGMGGGGXGRXXXXRXGGLGGXGXRXRGXGG 796
GG+GG G G GG GG G G
Sbjct: 226 GGLGGAGLGGLGGAGLGGFGGANNATAGIAG 256
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/65 (24%), Positives = 18/65 (27%)
Frame = +3
Query: 645 PXXPXPXLXXGAXPXXPPXXXPPXXXXPXXXXXTXSPAXPRXXXXXXAXXXXPXPFXXPQ 824
P P A P P PP P + P R + P P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPS 280
Query: 825 XPPTP 839
PP P
Sbjct: 281 QPPRP 285
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 921 GXXGGTXXXXXGGMGGGGXGRXXXXRXGGLGGXGXRXRGXGG 796
G GG GG GGG G GG G G R GG
Sbjct: 149 GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG-GFRGGSRGG 189
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2
Query: 821 PXPPNPPXRXXXXRPXPPPPIPPXXXXXVPP 913
P PP P PPPP+ +PP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 318 LRSLISNLSNTCDLTPLPEWSCEQSAW 238
+RS+ L D+TP+ +W ++S W
Sbjct: 109 VRSIEQELEQLRDVTPINQWKRKRSLW 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,525,371
Number of Sequences: 5004
Number of extensions: 20331
Number of successful extensions: 187
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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