Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP08_T7_M04
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   1.3  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    24   2.2  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 312 SLISNLSNTCDLTPLPEWSCEQSAWWGACGRVL 214
           SL +N   +  LTP P W+  ++   GACG  +
Sbjct: 98  SLDTNRGGSPKLTPYPNWAQNKA---GACGSAI 127


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 18/68 (26%), Positives = 18/68 (26%)
 Frame = +2

Query: 683 PXAPPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXR 862
           P   P   PP           A PG     P       PP P  R      P        
Sbjct: 75  PIYIPQPRPPHPRLRREAESEAEPGNNR--PVYIPQPRPPHPRLRREPEAEPGNNRPVYI 132

Query: 863 PXPPPPIP 886
           P P PP P
Sbjct: 133 PQPRPPHP 140



 Score = 23.4 bits (48), Expect = 3.0
 Identities = 19/68 (27%), Positives = 19/68 (27%)
 Frame = +2

Query: 683 PXAPPPXXPPXXXPPTXXXXHAXPGXXAXXPXXXXXXXPPXPLXRXPXPPNPPXRXXXXR 862
           P   P   PP   P       A PG     P       PP P  R      P        
Sbjct: 103 PVYIPQPRPPH--PRLRREPEAEPGNNR--PVYIPQPRPPHPRLRREPEAEPGNNRPVYI 158

Query: 863 PXPPPPIP 886
           P P PP P
Sbjct: 159 PQPRPPHP 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,286
Number of Sequences: 438
Number of extensions: 3140
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)